Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2426.t1
Gene name
Locationscaffold_03:10694..11076
Strand-
Gene length (bp)382
Transcript length (bp)303
Coding sequence length (bp)303
Protein length (aa) 101

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01532 Glyco_hydro_47 Glycosyl hydrolase family 47 5.1E-12 11 79

GO

GO Term Description Terminal node
GO:0004571 mannosyl-oligosaccharide 1,2-alpha-mannosidase activity Yes
GO:0016020 membrane Yes
GO:0005509 calcium ion binding Yes
GO:0016798 hydrolase activity, acting on glycosyl bonds No
GO:0016787 hydrolase activity No
GO:0043169 cation binding No
GO:0046872 metal ion binding No
GO:0005488 binding No
GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds No
GO:0003824 catalytic activity No
GO:0005575 cellular_component No
GO:0015923 mannosidase activity No
GO:0004559 alpha-mannosidase activity No
GO:0043167 ion binding No
GO:0015924 mannosyl-oligosaccharide mannosidase activity No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 53 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2426.t1
MATNRKKVPSDQKKFYEKAGFYINSGAYVQRPEVIESFYYAHRYRDSVWNAFVAINATCRTDSGFAAVSNVNQAN
GGSKYDNKGELHFRQGLEVLVSRSF*
Coding >Pro_DTO377G3_2|g2426.t1
ATGGCAACTAACCGGAAGAAGGTCCCGTCTGACCAGAAGAAATTCTACGAGAAGGCTGGCTTCTACATCAACAGC
GGTGCCTACGTCCAGCGTCCTGAAGTTATCGAGAGCTTCTACTATGCCCACCGCTATCGCGACAGTGTCTGGAAT
GCATTCGTCGCAATCAACGCTACCTGCCGCACTGACTCCGGTTTCGCTGCTGTGTCGAACGTCAACCAGGCCAAT
GGTGGCTCAAAGTACGACAACAAAGGAGAGCTTCATTTTCGCCAAGGTCTTGAAGTTCTAGTATCTCGCTCATTC
TGA
Transcript >Pro_DTO377G3_2|g2426.t1
ATGGCAACTAACCGGAAGAAGGTCCCGTCTGACCAGAAGAAATTCTACGAGAAGGCTGGCTTCTACATCAACAGC
GGTGCCTACGTCCAGCGTCCTGAAGTTATCGAGAGCTTCTACTATGCCCACCGCTATCGCGACAGTGTCTGGAAT
GCATTCGTCGCAATCAACGCTACCTGCCGCACTGACTCCGGTTTCGCTGCTGTGTCGAACGTCAACCAGGCCAAT
GGTGGCTCAAAGTACGACAACAAAGGAGAGCTTCATTTTCGCCAAGGTCTTGAAGTTCTAGTATCTCGCTCATTC
TGA
Gene >Pro_DTO377G3_2|g2426.t1
ATGGCAACTAACCGGAAGAAGGTCCCGTCTGACCAGAAGAAATTCTACGAGAAGGCTGGCTTCTACATCAACAGC
GGTGCCTACGTCCAGCGTCCTGAAGTTATCGAGAGCTTCTACTATGCCCACCGCGTTACCGGGAAGGAAATTGCA
TGTCTTCATCATACCACTATTACGCTTATTCTGATGGAATTAGCTAACACATTTTTAGTATCGCGACAGTGTCTG
GAATGCATTCGTCGCAATCAACGCTACCTGCCGCACTGACTCCGGTTTCGCTGCTGTGTCGAACGTCAACCAGGC
CAATGGTGGCTCAAAGTACGACAACAAAGGAGAGCTTCATTTTCGCCAAGGTCTTGAAGTTCTAGTATCTCGCTC
ATTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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