Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g2400.t1
Gene name
Location	scaffold_02:2451727..2453029
Strand	+
Gene length (bp)	1302
Transcript length (bp)	1116
Coding sequence length (bp)	1116
Protein length (aa)	372

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF16363	GDP_Man_Dehyd	GDP-mannose 4,6 dehydratase	4.1E-48	7	345
PF01370	Epimerase	NAD dependent epimerase/dehydratase family	3.3E-46	6	283
PF01073	3Beta_HSD	3-beta hydroxysteroid dehydrogenase/isomerase family	5.5E-15	7	176
PF02719	Polysacc_synt_2	Polysaccharide biosynthesis protein	5.4E-10	6	128
PF04321	RmlD_sub_bind	RmlD substrate binding domain	9.2E-10	6	171
PF00106	adh_short	short chain dehydrogenase	6.5E-09	6	129
PF08659	KR	KR domain	7.4E-06	4	136

GO

GO Term	Description	Terminal node
GO:0006694	steroid biosynthetic process	Yes
GO:0003854	3-beta-hydroxy-delta5-steroid dehydrogenase activity	Yes
GO:0016616	oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	Yes
GO:0009058	biosynthetic process	No
GO:0003824	catalytic activity	No
GO:0008202	steroid metabolic process	No
GO:0033764	steroid dehydrogenase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor	No
GO:0008150	biological_process	No
GO:1901360	organic cyclic compound metabolic process	No
GO:0071704	organic substance metabolic process	No
GO:0008152	metabolic process	No
GO:0006629	lipid metabolic process	No
GO:0003674	molecular_function	No
GO:1901362	organic cyclic compound biosynthetic process	No
GO:0016614	oxidoreductase activity, acting on CH-OH group of donors	No
GO:0016491	oxidoreductase activity	No
GO:1901576	organic substance biosynthetic process	No
GO:0016229	steroid dehydrogenase activity	No
GO:0044238	primary metabolic process	No
GO:0008610	lipid biosynthetic process	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 34	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g2400.t1 MSAGSVLVAGGTGYIGSFTTLALLEAGYKVVVADNLYNSSVEALHRIELICGKKAEFIKLDVTVENSFDQVFEAH PDIDSVIHFAALKAVGESGEKPLDYWLVNVYGTINLLRSMVKHNVTNIVFSSSATVYGDATRFPNMIPIPEDCPL GPTNPYGNTKFAVETAITDAINAQRNNATKAGNEAEAKKWNGALLRYFNPAGAHPSGIMGEDPQGVPYNLLPLLA QVATGKREKLMVFGDDYASHDGTAIRDYIHILDLADGHLKALKYLRANNPGVRAWNLGTGKGSTVYEMIRAFSTA VGKDQPYEVAPRRAGDVLNLTANPTRAHTELGWKAERTLEQACEDLWLWTKNNPEGYRQEPPAELLAQLKK*
Coding	>Pro_DTO377G3_2\|g2400.t1 ATGTCTGCTGGTTCTGTTCTTGTTGCTGGTGGCACGGGCTACATTGGCTCGTTCACCACCCTGGCCCTCCTTGAG GCTGGCTACAAGGTCGTCGTTGCCGACAACCTGTACAACTCTTCAGTCGAGGCCCTCCACCGTATTGAGCTGATC TGCGGCAAGAAGGCCGAGTTCATCAAGCTCGATGTCACCGTGGAGAACAGCTTCGACCAAGTGTTCGAAGCTCAC CCCGACATTGACAGCGTTATCCACTTCGCTGCCCTGAAGGCCGTTGGCGAGTCTGGCGAGAAGCCCCTGGACTAC TGGCTGGTCAACGTCTACGGCACCATCAACCTCCTGCGCTCCATGGTGAAGCACAATGTTACCAACATTGTCTTC TCCAGCTCCGCCACCGTCTACGGCGATGCCACCCGCTTCCCCAACATGATCCCCATCCCTGAGGACTGCCCTCTA GGCCCTACCAACCCCTACGGCAACACCAAGTTCGCCGTCGAGACCGCCATCACCGACGCGATCAACGCCCAGCGC AACAATGCCACCAAGGCAGGTAACGAGGCTGAGGCCAAGAAGTGGAACGGTGCTCTGCTCCGCTACTTCAACCCT GCCGGTGCTCATCCCAGCGGTATTATGGGCGAGGACCCCCAGGGTGTCCCCTACAACCTGCTCCCCCTGCTTGCC CAGGTCGCTACTGGCAAGCGCGAGAAGTTGATGGTCTTTGGTGATGACTACGCCTCGCACGACGGTACCGCCATC CGCGATTACATTCACATCCTAGATCTCGCAGATGGCCACCTCAAGGCCCTGAAATACCTGCGTGCCAACAACCCC GGTGTGCGCGCTTGGAACTTGGGTACCGGCAAGGGCAGCACTGTCTACGAGATGATCCGCGCCTTCTCCACCGCT GTCGGAAAGGACCAGCCCTACGAGGTTGCCCCCCGTCGCGCTGGCGATGTCCTCAACCTCACTGCCAACCCCACC CGCGCCCACACCGAGCTTGGCTGGAAGGCTGAACGTACCCTCGAGCAGGCTTGCGAGGATCTCTGGCTCTGGACT AAGAACAACCCCGAGGGTTACCGCCAGGAGCCCCCTGCTGAGCTGCTCGCTCAGCTTAAGAAGTGA
Transcript	>Pro_DTO377G3_2\|g2400.t1 ATGTCTGCTGGTTCTGTTCTTGTTGCTGGTGGCACGGGCTACATTGGCTCGTTCACCACCCTGGCCCTCCTTGAG GCTGGCTACAAGGTCGTCGTTGCCGACAACCTGTACAACTCTTCAGTCGAGGCCCTCCACCGTATTGAGCTGATC TGCGGCAAGAAGGCCGAGTTCATCAAGCTCGATGTCACCGTGGAGAACAGCTTCGACCAAGTGTTCGAAGCTCAC CCCGACATTGACAGCGTTATCCACTTCGCTGCCCTGAAGGCCGTTGGCGAGTCTGGCGAGAAGCCCCTGGACTAC TGGCTGGTCAACGTCTACGGCACCATCAACCTCCTGCGCTCCATGGTGAAGCACAATGTTACCAACATTGTCTTC TCCAGCTCCGCCACCGTCTACGGCGATGCCACCCGCTTCCCCAACATGATCCCCATCCCTGAGGACTGCCCTCTA GGCCCTACCAACCCCTACGGCAACACCAAGTTCGCCGTCGAGACCGCCATCACCGACGCGATCAACGCCCAGCGC AACAATGCCACCAAGGCAGGTAACGAGGCTGAGGCCAAGAAGTGGAACGGTGCTCTGCTCCGCTACTTCAACCCT GCCGGTGCTCATCCCAGCGGTATTATGGGCGAGGACCCCCAGGGTGTCCCCTACAACCTGCTCCCCCTGCTTGCC CAGGTCGCTACTGGCAAGCGCGAGAAGTTGATGGTCTTTGGTGATGACTACGCCTCGCACGACGGTACCGCCATC CGCGATTACATTCACATCCTAGATCTCGCAGATGGCCACCTCAAGGCCCTGAAATACCTGCGTGCCAACAACCCC GGTGTGCGCGCTTGGAACTTGGGTACCGGCAAGGGCAGCACTGTCTACGAGATGATCCGCGCCTTCTCCACCGCT GTCGGAAAGGACCAGCCCTACGAGGTTGCCCCCCGTCGCGCTGGCGATGTCCTCAACCTCACTGCCAACCCCACC CGCGCCCACACCGAGCTTGGCTGGAAGGCTGAACGTACCCTCGAGCAGGCTTGCGAGGATCTCTGGCTCTGGACT AAGAACAACCCCGAGGGTTACCGCCAGGAGCCCCCTGCTGAGCTGCTCGCTCAGCTTAAGAAGTGA
Gene	>Pro_DTO377G3_2\|g2400.t1 ATGTCTGCTGGTTCTGTTCTTGTTGCTGGGTAAGTGGTTGAATTACCTATTTGGGATCTTATAGTGAGCTAATTC CCCGCAAGTGGCACGGGCTACATTGGCTCGTTCACCACCCTGGCCCTCCTTGAGGCTGGCTACAAGGTCGTCGTT GCCGACAACCTGTACAACTCTTCAGTCGAGGCCCTCCACCGTATTGAGCTGATCTGCGGCAAGAAGGCCGAGTTC ATCAAGCTCGATGTCACCGTGGAGAACAGCTTCGACCAAGTGTTCGAAGCTCACCCCGACATTGACAGCGTTATC CACTTCGCTGCCCTGAAGGTGTGTACCCGATGAATTAAGAAAGCATAAATCGTATACCCTTCGATCCAGTAGCTG ATCCAATTGTCTTTATCCAGGCCGTTGGCGAGTCTGGCGAGAAGCCCCTGGACTACTGGCTGGTCAACGTCTACG GCACCATCAACCTCCTGCGCTCCATGGTGAAGCACAATGTTACCAACATTGTCTTCTCCAGCTCCGCCACCGTCT ACGGCGATGCCACCCGCTTCCCCAACATGATCCCCATCCCTGAGGACTGCCCTCTAGGCCCTACCAACCCCTACG GCAACACCAAGTTCGCCGTCGAGACCGCCATCACCGACGCGATCAACGCCCAGCGCAACAATGCCACCAAGGCAG GTAACGAGGCTGAGGCCAAGAAGTGGAACGGTGCTCTGCTCCGCTACTTCAACCCTGCCGGTGCTCATCCCAGCG GTATTATGGGCGAGGACCCCCAGGGTGTCCCCTACAACCTGCTCCCCCTGCTTGCCCAGGTCGCTACTGGCAAGC GCGAGAAGTTGATGGTCTTTGGTGATGGTATGCAAGCCCCTTCTTCCCATTATTGACACTCCCTGATCTAACACC ATCATAGACTACGCCTCGCACGACGGTACCGCCATCCGCGATTACATTCACATCCTAGATCTCGCAGATGGCCAC CTCAAGGCCCTGAAATACCTGCGTGCCAACAACCCCGGTGTGCGCGCTTGGAACTTGGGTACCGGCAAGGGCAGC ACTGTCTACGAGATGATCCGCGCCTTCTCCACCGCTGTCGGAAAGGACCAGCCCTACGAGGTTGCCCCCCGTCGC GCTGGCGATGTCCTCAACCTCACTGCCAACCCCACCCGCGCCCACACCGAGCTTGGCTGGAAGGCTGAACGTACC CTCGAGCAGGCTTGCGAGGATCTCTGGCTCTGGACTAAGAACAACCCCGAGGGTTACCGCCAGGAGCCCCCTGCT GAGCTGCTCGCTCAGCTTAAGAAGTGA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences