Protein ID | Pro_DTO377G3_2|g24.t1 |
Gene name | |
Location | scaffold_01:61132..63713 |
Strand | + |
Gene length (bp) | 2581 |
Transcript length (bp) | 2475 |
Coding sequence length (bp) | 2475 |
Protein length (aa) | 825 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF03031 | NIF | NLI interacting factor-like phosphatase | 5.0E-29 | 160 | 313 |
PF00533 | BRCT | BRCA1 C Terminus (BRCT) domain | 1.1E-06 | 531 | 588 |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 18 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g24.t1 MLLRLPTGLHYPITVTSLLKQPGDTIEKDGALFWYTYQTTVTEGDGLGNNIEVKRRFPARFESTIDGEIVKWQIQ KGDVIDEPVNVVEIDEPCAHEIQFGGLCAECGKDMTESTYNTEITDSMRAPISMAHDNLTLTVSKGEAARVEEDA KRRLLASRRLTLVVDLDQTIIHATVDPTVGEWREDKQNPNHEAVRDVRQFQLIDDGPGMRGCWYYIKLRPGLEEF LQNVAEIYELHIYTMGTRAYAQHIVDIIDPTRKLFGDRILSRDESGSLTVKDLQRLFPVDTKMVVIIDDRGDIWR WSPNLIKVSPYDFFVGIGDINSSFLPKKEDIGANKPQIEAKAPEQTNEHHVNGKTQEGAQVSALEQLVTMGGGDS PRLLQEQTDAQEETILHQVEDRPLLQKQKELEAEDNLAETNEVSSSIEETHESAKPRHHLLEDHDQELFQLQNRL EQVHSQFYDEYDKRRTLALGGRVAALGGRVAALRGEKVYSRDKDVDLKLVPDVKDIMPQIKRRILGGVVLVFSGV LPLGIDFQNADISLWAKSFGVTISSRVNARTTHLVAGRNRTAKVREATRYPNIKIVTTQWLVDALVQWRHVDEEP YLLPLHPDDRGEPLTPSELELETSMLSSADEDVTGPQWTQEDDAEDIFKSFGLDDTSPIGYDADEQAAVHDELKD FLGSDDESESDNESLLDEPSIGGKKRKRNEDTESGTDEEESGDDDGDDHDKQGSRLSQRIKRSYERNTKLREITS APATGSDQASPDRPQTSAVEGESDSETPGTSSAPKADYPDPDDDDDELEREMLAAFEGGGYDPHAEADPAAEDG* |
Coding | >Pro_DTO377G3_2|g24.t1 ATGCTTCTCCGTCTGCCCACCGGCCTACATTACCCGATCACCGTGACGTCGCTGCTCAAACAGCCTGGCGACACG ATTGAGAAGGATGGGGCTTTGTTTTGGTATACTTACCAGACTACCGTCACCGAGGGTGATGGACTGGGCAACAAC ATCGAGGTGAAACGTAGGTTCCCGGCTAGATTTGAATCGACTATTGATGGAGAGATCGTTAAATGGCAAATCCAA AAGGGAGACGTTATTGATGAACCGGTCAATGTTGTCGAAATCGATGAGCCTTGCGCGCACGAGATTCAGTTTGGA GGACTTTGTGCCGAGTGCGGGAAGGACATGACTGAATCTACGTACAATACCGAAATCACAGATTCCATGCGCGCT CCAATCTCCATGGCTCATGATAACCTCACACTTACGGTCAGCAAAGGGGAAGCAGCTCGAGTCGAAGAAGATGCG AAACGCCGGTTACTTGCATCGAGGCGTTTGACCTTGGTGGTGGATCTTGATCAAACTATTATCCATGCCACTGTT GATCCGACAGTGGGGGAATGGAGAGAAGATAAGCAAAATCCGAACCACGAAGCTGTGCGGGATGTGCGACAATTT CAATTGATCGACGATGGACCTGGGATGCGTGGATGCTGGTATTACATCAAGCTGCGGCCAGGACTAGAGGAGTTC CTGCAAAATGTGGCTGAGATTTATGAGCTGCACATCTACACTATGGGTACTCGTGCTTATGCCCAACATATTGTT GATATCATTGATCCCACCCGCAAGCTCTTCGGAGATCGAATTCTTAGTCGAGACGAGAGCGGAAGTTTGACGGTT AAGGACCTGCAACGGCTGTTCCCAGTGGACACAAAGATGGTGGTAATCATTGATGATCGTGGTGATATCTGGCGG TGGAGTCCCAATCTTATCAAGGTCTCACCTTATGACTTTTTCGTCGGAATTGGTGATATCAATTCTAGTTTCCTC CCAAAGAAGGAAGATATTGGAGCGAACAAGCCTCAGATCGAAGCGAAGGCACCGGAGCAGACCAATGAACACCAC GTCAATGGCAAAACGCAAGAAGGGGCCCAGGTATCAGCATTAGAACAGCTGGTGACCATGGGTGGTGGAGACAGC CCAAGGCTCCTCCAGGAACAGACCGATGCACAAGAAGAGACAATATTGCATCAGGTGGAGGATCGACCTTTGTTA CAGAAGCAAAAGGAATTGGAGGCAGAGGATAATCTTGCTGAAACCAATGAAGTATCGTCTAGCATTGAAGAAACC CACGAATCTGCGAAACCCCGACATCACCTACTCGAGGACCATGACCAAGAACTCTTCCAGCTGCAAAACCGACTC GAACAAGTACATTCTCAATTCTATGATGAATATGACAAGAGGCGGACTCTCGCCCTTGGGGGTCGGGTGGCTGCT CTAGGGGGTCGGGTAGCTGCTTTAAGGGGAGAGAAGGTTTACTCAAGAGACAAAGACGTGGATCTTAAATTGGTC CCCGATGTCAAAGACATCATGCCGCAGATCAAACGGCGGATCCTTGGAGGGGTGGTGCTTGTATTTTCAGGTGTC CTTCCTCTGGGCATAGACTTCCAGAATGCAGATATCTCGCTATGGGCGAAGAGCTTTGGTGTGACGATCTCGTCA AGGGTGAATGCCCGCACAACTCATCTCGTGGCTGGCCGCAATCGCACCGCTAAGGTGAGAGAAGCTACTCGCTAT CCCAACATCAAGATCGTGACGACACAATGGCTTGTCGACGCGTTGGTTCAGTGGAGACATGTTGACGAAGAACCT TATCTCCTCCCACTTCACCCAGACGACCGAGGCGAACCCCTGACTCCGAGTGAGCTCGAGCTTGAAACATCCATG CTCTCGTCCGCAGACGAGGATGTGACAGGGCCCCAATGGACACAAGAAGATGACGCTGAAGACATCTTCAAGTCA TTCGGCTTGGACGACACATCGCCGATCGGGTATGATGCGGACGAGCAAGCCGCTGTACACGATGAACTCAAGGAC TTTTTGGGCAGCGATGACGAAAGTGAAAGTGACAACGAATCCTTATTAGACGAACCATCCATAGGAGGCAAGAAG CGTAAACGCAACGAAGACACTGAAAGCGGCACCGACGAAGAAGAGTCTGGAGACGACGACGGAGATGACCATGAC AAACAAGGCTCCCGGCTCTCCCAACGCATCAAACGCTCCTATGAGCGCAACACCAAGCTGCGAGAAATTACATCG GCTCCTGCCACCGGTAGTGACCAGGCTTCCCCAGACCGCCCCCAAACATCGGCTGTGGAGGGGGAGTCTGACTCT GAGACACCGGGAACTAGCAGCGCTCCCAAGGCCGACTATCCCGACCCAGATGACGATGACGACGAGCTGGAACGG GAGATGCTTGCTGCATTTGAGGGCGGAGGGTATGACCCTCATGCAGAGGCAGATCCTGCAGCTGAGGACGGATAG |
Transcript | >Pro_DTO377G3_2|g24.t1 ATGCTTCTCCGTCTGCCCACCGGCCTACATTACCCGATCACCGTGACGTCGCTGCTCAAACAGCCTGGCGACACG ATTGAGAAGGATGGGGCTTTGTTTTGGTATACTTACCAGACTACCGTCACCGAGGGTGATGGACTGGGCAACAAC ATCGAGGTGAAACGTAGGTTCCCGGCTAGATTTGAATCGACTATTGATGGAGAGATCGTTAAATGGCAAATCCAA AAGGGAGACGTTATTGATGAACCGGTCAATGTTGTCGAAATCGATGAGCCTTGCGCGCACGAGATTCAGTTTGGA GGACTTTGTGCCGAGTGCGGGAAGGACATGACTGAATCTACGTACAATACCGAAATCACAGATTCCATGCGCGCT CCAATCTCCATGGCTCATGATAACCTCACACTTACGGTCAGCAAAGGGGAAGCAGCTCGAGTCGAAGAAGATGCG AAACGCCGGTTACTTGCATCGAGGCGTTTGACCTTGGTGGTGGATCTTGATCAAACTATTATCCATGCCACTGTT GATCCGACAGTGGGGGAATGGAGAGAAGATAAGCAAAATCCGAACCACGAAGCTGTGCGGGATGTGCGACAATTT CAATTGATCGACGATGGACCTGGGATGCGTGGATGCTGGTATTACATCAAGCTGCGGCCAGGACTAGAGGAGTTC CTGCAAAATGTGGCTGAGATTTATGAGCTGCACATCTACACTATGGGTACTCGTGCTTATGCCCAACATATTGTT GATATCATTGATCCCACCCGCAAGCTCTTCGGAGATCGAATTCTTAGTCGAGACGAGAGCGGAAGTTTGACGGTT AAGGACCTGCAACGGCTGTTCCCAGTGGACACAAAGATGGTGGTAATCATTGATGATCGTGGTGATATCTGGCGG TGGAGTCCCAATCTTATCAAGGTCTCACCTTATGACTTTTTCGTCGGAATTGGTGATATCAATTCTAGTTTCCTC CCAAAGAAGGAAGATATTGGAGCGAACAAGCCTCAGATCGAAGCGAAGGCACCGGAGCAGACCAATGAACACCAC GTCAATGGCAAAACGCAAGAAGGGGCCCAGGTATCAGCATTAGAACAGCTGGTGACCATGGGTGGTGGAGACAGC CCAAGGCTCCTCCAGGAACAGACCGATGCACAAGAAGAGACAATATTGCATCAGGTGGAGGATCGACCTTTGTTA CAGAAGCAAAAGGAATTGGAGGCAGAGGATAATCTTGCTGAAACCAATGAAGTATCGTCTAGCATTGAAGAAACC CACGAATCTGCGAAACCCCGACATCACCTACTCGAGGACCATGACCAAGAACTCTTCCAGCTGCAAAACCGACTC GAACAAGTACATTCTCAATTCTATGATGAATATGACAAGAGGCGGACTCTCGCCCTTGGGGGTCGGGTGGCTGCT CTAGGGGGTCGGGTAGCTGCTTTAAGGGGAGAGAAGGTTTACTCAAGAGACAAAGACGTGGATCTTAAATTGGTC CCCGATGTCAAAGACATCATGCCGCAGATCAAACGGCGGATCCTTGGAGGGGTGGTGCTTGTATTTTCAGGTGTC CTTCCTCTGGGCATAGACTTCCAGAATGCAGATATCTCGCTATGGGCGAAGAGCTTTGGTGTGACGATCTCGTCA AGGGTGAATGCCCGCACAACTCATCTCGTGGCTGGCCGCAATCGCACCGCTAAGGTGAGAGAAGCTACTCGCTAT CCCAACATCAAGATCGTGACGACACAATGGCTTGTCGACGCGTTGGTTCAGTGGAGACATGTTGACGAAGAACCT TATCTCCTCCCACTTCACCCAGACGACCGAGGCGAACCCCTGACTCCGAGTGAGCTCGAGCTTGAAACATCCATG CTCTCGTCCGCAGACGAGGATGTGACAGGGCCCCAATGGACACAAGAAGATGACGCTGAAGACATCTTCAAGTCA TTCGGCTTGGACGACACATCGCCGATCGGGTATGATGCGGACGAGCAAGCCGCTGTACACGATGAACTCAAGGAC TTTTTGGGCAGCGATGACGAAAGTGAAAGTGACAACGAATCCTTATTAGACGAACCATCCATAGGAGGCAAGAAG CGTAAACGCAACGAAGACACTGAAAGCGGCACCGACGAAGAAGAGTCTGGAGACGACGACGGAGATGACCATGAC AAACAAGGCTCCCGGCTCTCCCAACGCATCAAACGCTCCTATGAGCGCAACACCAAGCTGCGAGAAATTACATCG GCTCCTGCCACCGGTAGTGACCAGGCTTCCCCAGACCGCCCCCAAACATCGGCTGTGGAGGGGGAGTCTGACTCT GAGACACCGGGAACTAGCAGCGCTCCCAAGGCCGACTATCCCGACCCAGATGACGATGACGACGAGCTGGAACGG GAGATGCTTGCTGCATTTGAGGGCGGAGGGTATGACCCTCATGCAGAGGCAGATCCTGCAGCTGAGGACGGATAG |
Gene | >Pro_DTO377G3_2|g24.t1 ATGCTTCTCCGTCTGCCCACCGGCCTACATTACCCGATCACCGTGACGTCGCTGCTCAAACAGCCTGGCGACACG ATTGAGAAGGATGGGGCTTTGTTTTGGTATACTTACCAGACTACCGTCACCGAGGGTGATGGACTGGGCAACAAC ATCGAGGTGAAACGTAGGTTCCCGGCTAGATTTGAATCGACTATTGATGGAGAGATCGTTAAATGGCAAATCCAA AAGGGAGACGTTATTGATGAACCGTGAGTATACCGACCCTTGTCTTTTGCTATCCTTTTCTAATTTGTTGCTAGG GTCAATGTTGTCGAAATCGATGAGCCTTGCGCGCACGAGATTCAGTTTGGAGGACTTTGTGCCGAGTGCGGGAAG GACATGACTGAGTATGTATAAGCCTTTCAGCGGGAATTGAGCTTTTCTAACCTGTCTCGTGAACAGATCTACGTA CAATACCGAAATCACAGATTCCATGCGCGCTCCAATCTCCATGGCTCATGATAACCTCACACTTACGGTCAGCAA AGGGGAAGCAGCTCGAGTCGAAGAAGATGCGAAACGCCGGTTACTTGCATCGAGGCGTTTGACCTTGGTGGTGGA TCTTGATCAAACTATTATCCATGCCACTGTTGATCCGACAGTGGGGGAATGGAGAGAAGATAAGCAAAATCCGAA CCACGAAGCTGTGCGGGATGTGCGACAATTTCAATTGATCGACGATGGACCTGGGATGCGTGGATGCTGGTATTA CATCAAGCTGCGGCCAGGACTAGAGGAGTTCCTGCAAAATGTGGCTGAGATTTATGAGCTGCACATCTACACTAT GGGTACTCGTGCTTATGCCCAACATATTGTTGATATCATTGATCCCACCCGCAAGCTCTTCGGAGATCGAATTCT TAGTCGAGACGAGAGCGGAAGTTTGACGGTTAAGGACCTGCAACGGCTGTTCCCAGTGGACACAAAGATGGTGGT AATCATTGATGATCGTGGTGATATCTGGCGGTGGAGTCCCAATCTTATCAAGGTCTCACCTTATGACTTTTTCGT CGGAATTGGTGATATCAATTCTAGTTTCCTCCCAAAGAAGGAAGATATTGGAGCGAACAAGCCTCAGATCGAAGC GAAGGCACCGGAGCAGACCAATGAACACCACGTCAATGGCAAAACGCAAGAAGGGGCCCAGGTATCAGCATTAGA ACAGCTGGTGACCATGGGTGGTGGAGACAGCCCAAGGCTCCTCCAGGAACAGACCGATGCACAAGAAGAGACAAT ATTGCATCAGGTGGAGGATCGACCTTTGTTACAGAAGCAAAAGGAATTGGAGGCAGAGGATAATCTTGCTGAAAC CAATGAAGTATCGTCTAGCATTGAAGAAACCCACGAATCTGCGAAACCCCGACATCACCTACTCGAGGACCATGA CCAAGAACTCTTCCAGCTGCAAAACCGACTCGAACAAGTACATTCTCAATTCTATGATGAATATGACAAGAGGCG GACTCTCGCCCTTGGGGGTCGGGTGGCTGCTCTAGGGGGTCGGGTAGCTGCTTTAAGGGGAGAGAAGGTTTACTC AAGAGACAAAGACGTGGATCTTAAATTGGTCCCCGATGTCAAAGACATCATGCCGCAGATCAAACGGCGGATCCT TGGAGGGGTGGTGCTTGTATTTTCAGGTGTCCTTCCTCTGGGCATAGACTTCCAGAATGCAGATATCTCGCTATG GGCGAAGAGCTTTGGTGTGACGATCTCGTCAAGGGTGAATGCCCGCACAACTCATCTCGTGGCTGGCCGCAATCG CACCGCTAAGGTGAGAGAAGCTACTCGCTATCCCAACATCAAGATCGTGACGACACAATGGCTTGTCGACGCGTT GGTTCAGTGGAGACATGTTGACGAAGAACCTTATCTCCTCCCACTTCACCCAGACGACCGAGGCGAACCCCTGAC TCCGAGTGAGCTCGAGCTTGAAACATCCATGCTCTCGTCCGCAGACGAGGATGTGACAGGGCCCCAATGGACACA AGAAGATGACGCTGAAGACATCTTCAAGTCATTCGGCTTGGACGACACATCGCCGATCGGGTATGATGCGGACGA GCAAGCCGCTGTACACGATGAACTCAAGGACTTTTTGGGCAGCGATGACGAAAGTGAAAGTGACAACGAATCCTT ATTAGACGAACCATCCATAGGAGGCAAGAAGCGTAAACGCAACGAAGACACTGAAAGCGGCACCGACGAAGAAGA GTCTGGAGACGACGACGGAGATGACCATGACAAACAAGGCTCCCGGCTCTCCCAACGCATCAAACGCTCCTATGA GCGCAACACCAAGCTGCGAGAAATTACATCGGCTCCTGCCACCGGTAGTGACCAGGCTTCCCCAGACCGCCCCCA AACATCGGCTGTGGAGGGGGAGTCTGACTCTGAGACACCGGGAACTAGCAGCGCTCCCAAGGCCGACTATCCCGA CCCAGATGACGATGACGACGAGCTGGAACGGGAGATGCTTGCTGCATTTGAGGGCGGAGGGTATGACCCTCATGC AGAGGCAGATCCTGCAGCTGAGGACGGATAG |