© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g2382.t1 |
| Gene name | |
| Location | scaffold_02:2407719..2410629 |
| Strand | + |
| Gene length (bp) | 2910 |
| Transcript length (bp) | 2580 |
| Coding sequence length (bp) | 2580 |
| Protein length (aa) | 860 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00654 | Voltage_CLC | Voltage gated chloride channel | 1.5E-85 | 187 | 566 |
| PF00571 | CBS | CBS domain | 3.5E-04 | 599 | 656 |
| PF00571 | CBS | CBS domain | 3.8E-06 | 719 | 765 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0005247 | voltage-gated chloride channel activity | Yes |
| GO:0016020 | membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0006821 | chloride transport | Yes |
| GO:0015698 | inorganic anion transport | No |
| GO:0015267 | channel activity | No |
| GO:0022836 | gated channel activity | No |
| GO:0006820 | anion transport | No |
| GO:0051234 | establishment of localization | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0005575 | cellular_component | No |
| GO:0015108 | chloride transmembrane transporter activity | No |
| GO:0022832 | voltage-gated channel activity | No |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0005253 | anion channel activity | No |
| GO:0005254 | chloride channel activity | No |
| GO:0003674 | molecular_function | No |
| GO:0022803 | passive transmembrane transporter activity | No |
| GO:0008308 | voltage-gated anion channel activity | No |
| GO:0006811 | ion transport | No |
| GO:0005216 | ion channel activity | No |
| GO:0015103 | inorganic anion transmembrane transporter activity | No |
| GO:0015075 | ion transmembrane transporter activity | No |
| GO:0051179 | localization | No |
| GO:0015318 | inorganic molecular entity transmembrane transporter activity | No |
| GO:0005215 | transporter activity | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0008509 | anion transmembrane transporter activity | No |
| GO:0009987 | cellular process | No |
| GO:0005244 | voltage-gated ion channel activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 48 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 110 | 132 | 22 |
| 2 | 172 | 194 | 22 |
| 3 | 220 | 242 | 22 |
| 4 | 278 | 300 | 22 |
| 5 | 313 | 335 | 22 |
| 6 | 350 | 372 | 22 |
| 7 | 392 | 411 | 19 |
| 8 | 443 | 465 | 22 |
| 9 | 472 | 494 | 22 |
| 10 | 514 | 533 | 19 |
| 11 | 540 | 562 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g2382.t1 MTSTRPSTTFNRSLSVSRERRSPRMPPSRSVPSPVDRRGDSDNQEAPAIPEEISGIKRYEDFTTIDWVQDAVYEQ SRRRAKRRSGTGFWDQEGILGWRRKMYESYDAGQAWLVVTLVGLAIGLNSAVLNIITEWLSDIKLGHCTTAFYLN ESFCCWGAENGCPEWKNWTSWWLLNYVFYFFGALVLSSIAGVLVKSFAPYAAGSGISEIKCIIAGFVMKGFLGAW TLLIKSIALPLAIASGLSVGKEGPSVHFAVCTGNVISRFFGKYKQNASKTREILTASAAAGVAVAFGSPIGGVLF SLEEMANYFPLKTLWRSYFCALVATSVLAAVNPFRTGQLVMFQVEYDRTWHFFEFIFFIGLGVFGGLYGAFVMKW NLRMAAFRKKYLSQWPITESVVLAGLTAVLCYPNMFLKINMTAMMEILFRECEGGHDYHGLCESKNRWSMVFSLA IATVLRTVLVIISYGCKVPAGIFVPSMAVGASFGRMIGIMVQALHESFPQSAFFASCDPDVPCITPGTYAFLGAG AALSGIMHLTISVTVIMFELTGALTYILPTMIVVGVTKAVGDRFGSGGIADRMIWFNGFPFLDNKEDHVFNVPVS HAMTTGPLSVPASDFPVREAEHLLNDNKFQGFPVVEDRTSKTLVGYIGRTELRYAIDRARNQGMVAPNARCVFTK DAAEAAVARRASVSHHSRSSDTFDAIQRSVGASFVDFSRYVDHTPLTVHPRHPLETVMEIFKKMGPRVILVEHRG KLIGLVTVKDCLKYQFKVEAEEHTLAATSSSQYSALGGQLNNPAPETLEDRLWRLIQTAAAFVSGKISRRPVRPR DRTMPRQPEHSDILEGRDDDAVVELEDREDRPMI* |
| Coding | >Pro_DTO377G3_2|g2382.t1 ATGACCTCTACACGCCCCTCCACGACCTTTAATAGGTCCCTTTCAGTTTCAAGAGAGCGGCGCAGCCCGCGAATG CCACCCAGTCGTTCTGTTCCCTCCCCCGTCGACCGACGAGGCGATTCCGACAACCAGGAAGCACCCGCCATCCCA GAAGAGATTAGTGGGATCAAGCGATATGAAGATTTTACCACAATAGACTGGGTCCAAGATGCAGTCTATGAGCAG TCACGGCGACGCGCGAAACGGCGCAGTGGCACTGGATTCTGGGATCAGGAAGGCATCCTTGGCTGGAGACGGAAA ATGTACGAGTCATACGATGCAGGCCAGGCATGGCTTGTTGTTACGCTTGTGGGCTTGGCAATCGGATTAAACTCG GCTGTGCTCAATATCATCACGGAATGGCTCTCTGATATTAAGCTGGGCCATTGTACTACCGCATTCTACCTTAAT GAGTCTTTCTGCTGCTGGGGTGCCGAGAATGGCTGCCCCGAGTGGAAGAATTGGACTTCGTGGTGGCTGTTAAAT TATGTTTTCTATTTCTTTGGCGCGTTGGTACTTTCATCTATCGCTGGAGTCCTGGTCAAATCATTTGCGCCGTAC GCTGCAGGCTCTGGTATCTCAGAGATCAAATGCATTATTGCCGGCTTCGTCATGAAGGGCTTCCTAGGGGCATGG ACTCTCCTAATCAAGTCAATTGCCCTTCCACTAGCTATTGCGTCGGGCTTGTCTGTTGGAAAAGAGGGGCCTAGC GTGCATTTTGCTGTGTGTACCGGAAACGTGATATCACGATTTTTCGGCAAATACAAACAAAATGCATCGAAAACG AGAGAAATCTTGACTGCCTCAGCGGCAGCTGGCGTGGCTGTCGCCTTTGGCAGTCCAATTGGAGGCGTGCTTTTC TCCCTGGAGGAAATGGCAAACTATTTTCCCCTCAAGACTCTTTGGCGCAGCTATTTCTGTGCCTTGGTGGCAACC AGTGTGCTAGCGGCTGTCAATCCTTTCCGGACTGGTCAATTGGTCATGTTCCAAGTGGAATATGATCGCACATGG CACTTTTTCGAGTTCATCTTCTTTATTGGTCTTGGCGTCTTCGGTGGACTTTACGGTGCATTTGTAATGAAATGG AACCTTCGAATGGCCGCGTTCCGCAAGAAATACCTCTCACAGTGGCCTATAACCGAGTCGGTTGTTCTCGCGGGA CTTACTGCAGTACTGTGCTACCCCAACATGTTTCTGAAGATCAACATGACCGCAATGATGGAGATCTTATTCCGC GAATGCGAGGGTGGCCATGACTATCATGGACTATGCGAGTCCAAGAACAGATGGTCGATGGTCTTCTCGCTAGCT ATTGCGACTGTCCTTCGCACTGTGTTAGTTATTATTTCCTACGGGTGCAAGGTGCCAGCCGGTATCTTCGTGCCT TCGATGGCTGTGGGGGCTTCATTCGGCCGCATGATTGGAATCATGGTACAGGCATTACATGAATCATTTCCCCAA TCGGCATTCTTCGCCTCGTGTGATCCAGATGTCCCTTGTATTACACCGGGAACATATGCGTTCCTGGGAGCCGGG GCAGCCCTCAGTGGAATCATGCATTTGACCATTTCTGTAACGGTCATCATGTTCGAGTTGACTGGTGCACTAACC TACATTCTACCGACCATGATTGTGGTAGGCGTCACCAAAGCCGTTGGCGATCGATTCGGCAGTGGCGGTATCGCC GATCGAATGATATGGTTCAACGGGTTCCCATTCCTAGACAACAAGGAGGACCACGTCTTCAACGTACCCGTATCT CATGCAATGACCACAGGCCCGCTCTCGGTACCAGCATCGGATTTCCCCGTCCGCGAAGCAGAGCATCTCCTAAAC GACAACAAATTCCAAGGCTTCCCTGTCGTGGAGGACCGCACTTCCAAAACCCTAGTTGGATACATCGGCCGAACC GAACTCCGATACGCGATCGACCGCGCCCGCAACCAGGGAATGGTTGCGCCAAATGCCCGGTGCGTGTTCACCAAA GATGCAGCCGAGGCAGCCGTTGCACGCAGGGCGTCCGTCTCGCACCACTCTCGGTCATCAGATACATTCGATGCA ATTCAGAGGAGTGTGGGGGCTTCTTTCGTGGATTTCTCGCGATATGTCGACCACACGCCACTGACCGTTCACCCG CGCCATCCTCTCGAAACGGTCATGGAGATTTTCAAGAAGATGGGCCCGCGAGTCATTCTCGTCGAGCACCGCGGC AAACTAATCGGCTTGGTCACCGTCAAGGACTGCTTGAAGTATCAATTCAAGGTCGAAGCCGAGGAACATACACTG GCCGCAACGAGTTCTTCTCAATATAGTGCGCTTGGTGGGCAGCTGAACAACCCTGCCCCTGAAACACTGGAAGAT CGCTTGTGGCGGCTCATCCAGACTGCCGCTGCGTTTGTGTCTGGTAAGATCTCTCGCCGGCCGGTCCGACCGCGT GACCGCACGATGCCTAGGCAACCGGAGCATTCGGATATTCTCGAAGGGAGGGATGATGACGCGGTGGTAGAATTG GAGGACAGAGAAGACCGGCCGATGATATGA |
| Transcript | >Pro_DTO377G3_2|g2382.t1 ATGACCTCTACACGCCCCTCCACGACCTTTAATAGGTCCCTTTCAGTTTCAAGAGAGCGGCGCAGCCCGCGAATG CCACCCAGTCGTTCTGTTCCCTCCCCCGTCGACCGACGAGGCGATTCCGACAACCAGGAAGCACCCGCCATCCCA GAAGAGATTAGTGGGATCAAGCGATATGAAGATTTTACCACAATAGACTGGGTCCAAGATGCAGTCTATGAGCAG TCACGGCGACGCGCGAAACGGCGCAGTGGCACTGGATTCTGGGATCAGGAAGGCATCCTTGGCTGGAGACGGAAA ATGTACGAGTCATACGATGCAGGCCAGGCATGGCTTGTTGTTACGCTTGTGGGCTTGGCAATCGGATTAAACTCG GCTGTGCTCAATATCATCACGGAATGGCTCTCTGATATTAAGCTGGGCCATTGTACTACCGCATTCTACCTTAAT GAGTCTTTCTGCTGCTGGGGTGCCGAGAATGGCTGCCCCGAGTGGAAGAATTGGACTTCGTGGTGGCTGTTAAAT TATGTTTTCTATTTCTTTGGCGCGTTGGTACTTTCATCTATCGCTGGAGTCCTGGTCAAATCATTTGCGCCGTAC GCTGCAGGCTCTGGTATCTCAGAGATCAAATGCATTATTGCCGGCTTCGTCATGAAGGGCTTCCTAGGGGCATGG ACTCTCCTAATCAAGTCAATTGCCCTTCCACTAGCTATTGCGTCGGGCTTGTCTGTTGGAAAAGAGGGGCCTAGC GTGCATTTTGCTGTGTGTACCGGAAACGTGATATCACGATTTTTCGGCAAATACAAACAAAATGCATCGAAAACG AGAGAAATCTTGACTGCCTCAGCGGCAGCTGGCGTGGCTGTCGCCTTTGGCAGTCCAATTGGAGGCGTGCTTTTC TCCCTGGAGGAAATGGCAAACTATTTTCCCCTCAAGACTCTTTGGCGCAGCTATTTCTGTGCCTTGGTGGCAACC AGTGTGCTAGCGGCTGTCAATCCTTTCCGGACTGGTCAATTGGTCATGTTCCAAGTGGAATATGATCGCACATGG CACTTTTTCGAGTTCATCTTCTTTATTGGTCTTGGCGTCTTCGGTGGACTTTACGGTGCATTTGTAATGAAATGG AACCTTCGAATGGCCGCGTTCCGCAAGAAATACCTCTCACAGTGGCCTATAACCGAGTCGGTTGTTCTCGCGGGA CTTACTGCAGTACTGTGCTACCCCAACATGTTTCTGAAGATCAACATGACCGCAATGATGGAGATCTTATTCCGC GAATGCGAGGGTGGCCATGACTATCATGGACTATGCGAGTCCAAGAACAGATGGTCGATGGTCTTCTCGCTAGCT ATTGCGACTGTCCTTCGCACTGTGTTAGTTATTATTTCCTACGGGTGCAAGGTGCCAGCCGGTATCTTCGTGCCT TCGATGGCTGTGGGGGCTTCATTCGGCCGCATGATTGGAATCATGGTACAGGCATTACATGAATCATTTCCCCAA TCGGCATTCTTCGCCTCGTGTGATCCAGATGTCCCTTGTATTACACCGGGAACATATGCGTTCCTGGGAGCCGGG GCAGCCCTCAGTGGAATCATGCATTTGACCATTTCTGTAACGGTCATCATGTTCGAGTTGACTGGTGCACTAACC TACATTCTACCGACCATGATTGTGGTAGGCGTCACCAAAGCCGTTGGCGATCGATTCGGCAGTGGCGGTATCGCC GATCGAATGATATGGTTCAACGGGTTCCCATTCCTAGACAACAAGGAGGACCACGTCTTCAACGTACCCGTATCT CATGCAATGACCACAGGCCCGCTCTCGGTACCAGCATCGGATTTCCCCGTCCGCGAAGCAGAGCATCTCCTAAAC GACAACAAATTCCAAGGCTTCCCTGTCGTGGAGGACCGCACTTCCAAAACCCTAGTTGGATACATCGGCCGAACC GAACTCCGATACGCGATCGACCGCGCCCGCAACCAGGGAATGGTTGCGCCAAATGCCCGGTGCGTGTTCACCAAA GATGCAGCCGAGGCAGCCGTTGCACGCAGGGCGTCCGTCTCGCACCACTCTCGGTCATCAGATACATTCGATGCA ATTCAGAGGAGTGTGGGGGCTTCTTTCGTGGATTTCTCGCGATATGTCGACCACACGCCACTGACCGTTCACCCG CGCCATCCTCTCGAAACGGTCATGGAGATTTTCAAGAAGATGGGCCCGCGAGTCATTCTCGTCGAGCACCGCGGC AAACTAATCGGCTTGGTCACCGTCAAGGACTGCTTGAAGTATCAATTCAAGGTCGAAGCCGAGGAACATACACTG GCCGCAACGAGTTCTTCTCAATATAGTGCGCTTGGTGGGCAGCTGAACAACCCTGCCCCTGAAACACTGGAAGAT CGCTTGTGGCGGCTCATCCAGACTGCCGCTGCGTTTGTGTCTGGTAAGATCTCTCGCCGGCCGGTCCGACCGCGT GACCGCACGATGCCTAGGCAACCGGAGCATTCGGATATTCTCGAAGGGAGGGATGATGACGCGGTGGTAGAATTG GAGGACAGAGAAGACCGGCCGATGATATGA |
| Gene | >Pro_DTO377G3_2|g2382.t1 ATGACCTCTACACGCCCCTCCACGACCTTTAATAGGTCCCTTTCAGTTTCAAGAGAGCGGCGCAGCCCGCGAATG CCACCCAGTCGTTCTGTTCCCTCCCCCGTCGACCGACGAGGCGATTCCGACAACCAGGAAGCACCCGCCATCCCA GAAGAGATTAGTGGGATCAAGCGATATGAAGATTTTACCACAATAGACTGGGTCCAAGATGCAGTCTATGAGCAG TCACGGCGACGCGCGAAACGGCGCAGTGGCACTGGATTCTGGGATCAGGAAGGCATCCTTGGCTGGAGACGGAAA ATGTACGAGTCATACGATGCAGGCCAGGCATGGCTTGTTGTTACGCTTGTGGGCTTGGCAATCGGATTAAACTCG GCTGTGCTCAATATCATCACGGAATGGCTCTCTGATATTAAGCTGGGCCATTGTACTACCGCATTCTACCTTAAT GAGTCTTTCTGCTGCTGGGGTGCCGAGAATGGTATGTTCGGGAGGTTCTACAGCGCTTCTTGTAAACTAACTTTT TCCATAATAGGCTGCCCCGAGTGGAAGAATTGGACTTCGTGGTGGCTGTTAAATTATGTTTTCTATTTCTTTGGC GCGGTAAGACGTGTGCCCGGCTAGTACTCGAGAAACTATGAACTCATAGGCTAATTCGGAAGACAGTTGGTACTT TCATCTATCGCTGGAGTCCTGGTCAAATCATTTGCGCCGTACGCTGCAGGCTCTGGTATCTCAGAGATCAAATGC ATTATTGCCGGCTTCGTCATGAAGGGCTTCCTAGGGGCATGGACTCTCCTAATCAAGTCAATTGCCCTTCCACTA GCTATTGCGTCGGGCTTGTCTGTTGGAAAAGAGGGGCCTAGCGTGCATTTTGCTGTGTGTACCGGAAACGTGATA TCACGATTTTTCGGCAAATACAAACAAAATGCATCGAAAACGAGAGAAATCTTGACTGCCTCAGCGGCAGCTGGC GTGGCTGTCGCCTTTGGCAGTCCAATTGGAGGCGTGCTTTTCTCCCTGGAGGTGAGTTCAATCGTGCACTAGTTG ATAGGACGTAAGCTGACAGTCAATAGGAAATGGCAAACTATTTTCCCCTCAAGACTCTTTGGCGCAGCTATTTCT GTGCCTTGGTGGCAACCAGTGTGCTAGCGGTACGTTTCCCATATTGTCAATTGAGTCTGGACCACACCTGATCCA TTCTAGGCTGTCAATCCTTTCCGGACTGGTCAATTGGTCATGTTCCAAGTGGAATATGATCGCACATGGCACTTT TTCGAGTTCATCTTCTTTATTGGTCTTGGCGTCTTCGGTGGACTTTACGGTGCATTTGTAATGAAATGGAACCTT CGAATGGCCGCGTTCCGCAAGAAATACCTCTCACAGTGGCCTATAACCGAGTCGGTTGTTCTCGCGGGACTTACT GCAGTACTGTGCTACCCCAACATGTTTCTGAAGATCAACATGACCGCAATGATGGAGATCTTATTCCGCGAATGC GAGGGTGGCCATGACTATCATGGACTATGCGAGTATGATTATTCGCCTCCATATGCATGAAAGAACACCACTAAC TCATTGCAGGTCCAAGAACAGATGGTCGATGGTCTTCTCGCTAGCTATTGCGACTGTCCTTCGCACTGTGTTAGT TATTATTTCCTACGGGTGCAAGGTGCCAGCCGGTATCTTCGTGCCTTCGATGGCTGTGGGGGCTTCATTCGGCCG CATGATTGGAATCATGGTACAGGCATTACATGAATCATTTCCCCAATCGGCATTCTTCGCCTCGTGTGATCCAGA TGTCCCTTGTATTACACCGGGAACATATGCGTTCCTGGGAGCCGGGGCAGCCCTCAGTGGAATCATGCATTTGAC CATTTCTGTAACGGTCATCATGTTCGAGTTGACTGGTGCACTAACCTACATTCTACCGACCATGGTAAGTCTTCA TTCTAAATTGCATTACCTCATTCAACCATCCTGACTGTCCTTTTACAGATTGTGGTAGGCGTCACCAAAGCCGTT GGCGATCGATTCGGCAGTGGCGGTATCGCCGATCGAATGATATGGTTCAACGGGTTCCCATTCCTAGACAACAAG GAGGACCACGTCTTCAACGTACCCGTATCTCATGCAATGACCACAGGCCCGCTCTCGGTACCAGCATCGGATTTC CCCGTCCGCGAAGCAGAGCATCTCCTAAACGACAACAAATTCCAAGGCTTCCCTGTCGTGGAGGACCGCACTTCC AAAACCCTAGTTGGATACATCGGCCGAACCGAACTCCGATACGCGATCGACCGCGCCCGCAACCAGGGAATGGTT GCGCCAAATGCCCGGTGCGTGTTCACCAAAGATGCAGCCGAGGCAGCCGTTGCACGCAGGGCGTCCGTCTCGCAC CACTCTCGGTCATCAGATACATTCGATGCAATTCAGAGGAGTGTGGGGGCTTCTTTCGTGGATTTCTCGCGATAT GTCGACCACACGCCACTGACCGTTCACCCGCGCCATCCTCTCGAAACGGTCATGGAGATTTTCAAGAAGATGGGC CCGCGAGTCATTCTCGTCGAGCACCGCGGCAAACTAATCGGCTTGGTCACCGTCAAGGACTGCTTGAAGTATCAA TTCAAGGTCGAAGCCGAGGAACATACACTGGCCGCAACGAGTTCTTCTCAATATAGTGCGCTTGGTGGGCAGCTG AACAACCCTGCCCCTGAAACACTGGAAGATCGCTTGTGGCGGCTCATCCAGACTGCCGCTGCGTTTGTGTCTGGT AAGATCTCTCGCCGGCCGGTCCGACCGCGTGACCGCACGATGCCTAGGCAACCGGAGCATTCGGATATTCTCGAA GGGAGGGATGATGACGCGGTGGTAGAATTGGAGGACAGAGAAGACCGGCCGATGATATGA |