Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2378.t1
Gene name
Locationscaffold_02:2400242..2400776
Strand+
Gene length (bp)534
Transcript length (bp)456
Coding sequence length (bp)456
Protein length (aa) 152

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01679 Pmp3 Proteolipid membrane potential modulator 2.2E-18 5 53

GO

GO Term Description Terminal node
GO:0016021 integral component of membrane Yes
GO:0110165 cellular anatomical entity No
GO:0005575 cellular_component No
GO:0031224 intrinsic component of membrane No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 21 0.5

Transmembrane Domains

Domain # Start End Length
1 5 22 17
2 32 54 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2378.t1
MCSSDLFLAVLAVFFPPIAVWVKAGFCSADSFINITLTLLCFFPGLIHAWYIILKYPEQYDDDVAYEPIPGGGSR
RRDLENGNVTYYYVSRQPQRGYGTVDTQDQQAPGPANKPHNQTEASGNAGSSSAPPPPTYAEAVKGDNKLQSNER
E*
Coding >Pro_DTO377G3_2|g2378.t1
ATGTGCAGCTCCGACCTTTTCCTAGCGGTACTCGCCGTCTTTTTCCCACCTATTGCAGTCTGGGTCAAGGCCGGG
TTCTGCAGTGCAGACTCGTTCATCAACATAACTCTCACCCTACTCTGCTTCTTCCCGGGTCTCATCCACGCGTGG
TACATCATCCTCAAGTACCCGGAGCAATACGACGACGATGTAGCCTACGAGCCCATCCCCGGAGGCGGGAGTCGG
CGGCGCGATCTGGAGAACGGAAACGTTACCTACTACTACGTCTCACGACAGCCCCAGCGCGGATATGGCACAGTC
GACACTCAAGACCAGCAGGCGCCTGGTCCGGCGAACAAACCACACAACCAGACTGAAGCAAGTGGAAATGCTGGG
AGCAGCAGTGCGCCCCCACCACCGACTTATGCTGAGGCTGTGAAGGGTGACAATAAGCTGCAGAGCAATGAACGA
GAGTGA
Transcript >Pro_DTO377G3_2|g2378.t1
ATGTGCAGCTCCGACCTTTTCCTAGCGGTACTCGCCGTCTTTTTCCCACCTATTGCAGTCTGGGTCAAGGCCGGG
TTCTGCAGTGCAGACTCGTTCATCAACATAACTCTCACCCTACTCTGCTTCTTCCCGGGTCTCATCCACGCGTGG
TACATCATCCTCAAGTACCCGGAGCAATACGACGACGATGTAGCCTACGAGCCCATCCCCGGAGGCGGGAGTCGG
CGGCGCGATCTGGAGAACGGAAACGTTACCTACTACTACGTCTCACGACAGCCCCAGCGCGGATATGGCACAGTC
GACACTCAAGACCAGCAGGCGCCTGGTCCGGCGAACAAACCACACAACCAGACTGAAGCAAGTGGAAATGCTGGG
AGCAGCAGTGCGCCCCCACCACCGACTTATGCTGAGGCTGTGAAGGGTGACAATAAGCTGCAGAGCAATGAACGA
GAGTGA
Gene >Pro_DTO377G3_2|g2378.t1
ATGTGCAGCTCCGACCTTTTCCTAGCGGTACTCGCCGTCTTTTTCCCACCTATTGCAGGTAACTTTTAAACCCGC
AGACCCGCACGCCAACACACCTACACTTGGTCCAATGCTAACCAAACCCCCGCATCAACAGTCTGGGTCAAGGCC
GGGTTCTGCAGTGCAGACTCGTTCATCAACATAACTCTCACCCTACTCTGCTTCTTCCCGGGTCTCATCCACGCG
TGGTACATCATCCTCAAGTACCCGGAGCAATACGACGACGATGTAGCCTACGAGCCCATCCCCGGAGGCGGGAGT
CGGCGGCGCGATCTGGAGAACGGAAACGTTACCTACTACTACGTCTCACGACAGCCCCAGCGCGGATATGGCACA
GTCGACACTCAAGACCAGCAGGCGCCTGGTCCGGCGAACAAACCACACAACCAGACTGAAGCAAGTGGAAATGCT
GGGAGCAGCAGTGCGCCCCCACCACCGACTTATGCTGAGGCTGTGAAGGGTGACAATAAGCTGCAGAGCAATGAA
CGAGAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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