© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g2362.t1 |
| Gene name | |
| Location | scaffold_02:2360132..2361080 |
| Strand | + |
| Gene length (bp) | 948 |
| Transcript length (bp) | 816 |
| Coding sequence length (bp) | 816 |
| Protein length (aa) | 272 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13085 | Fer2_3 | 2Fe-2S iron-sulfur cluster binding domain | 6.8E-32 | 41 | 147 |
| PF13534 | Fer4_17 | 4Fe-4S dicluster domain | 9.6E-10 | 184 | 257 |
| PF13237 | Fer4_10 | 4Fe-4S dicluster domain | 1.9E-07 | 184 | 253 |
| PF13183 | Fer4_8 | 4Fe-4S dicluster domain | 4.1E-07 | 182 | 255 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0051536 | iron-sulfur cluster binding | Yes |
| GO:0009055 | electron transfer activity | Yes |
| GO:0016491 | oxidoreductase activity | No |
| GO:0005488 | binding | No |
| GO:0051540 | metal cluster binding | No |
| GO:0003674 | molecular_function | No |
| GO:0003824 | catalytic activity | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 24 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g2362.t1 MASLRTTSRLFAASRPMFRPAFARTYATVEPTPTVQPKIKTFKVYRWNPDHPSEKPQMQSYELDLNKTGPMMLDA LIRIKNELDPTLTFRRSCREGICGSCAMNIDGVNTLACLCRIPTDTKTESRIYPLPHTYVVKDLVPDLTHFYKQY KSIKPYLQRDTHTADGLENRQSPEDRRKLDGLYECILCACCSTSCPSYWWNSEEYLGPAILLQSFRWLIDSRDER TAERKAALDNSMSVYRCHTILNCTRTCPKGLNPGRAIAEIKKMLAV* |
| Coding | >Pro_DTO377G3_2|g2362.t1 ATGGCCTCCCTCCGTACCACTTCGCGATTGTTCGCGGCGTCGCGGCCGATGTTCCGCCCTGCCTTCGCTCGCACC TATGCGACCGTCGAGCCTACTCCCACCGTGCAACCCAAGATCAAGACCTTCAAGGTCTACCGCTGGAACCCGGAC CACCCCAGCGAGAAGCCCCAGATGCAGTCCTACGAGCTCGATCTGAACAAGACCGGACCCATGATGCTTGACGCG CTCATCCGGATAAAGAACGAGCTCGACCCTACCCTCACTTTCCGCAGATCTTGCCGTGAGGGTATCTGCGGTTCT TGCGCCATGAACATCGACGGTGTCAACACTCTCGCCTGCTTGTGCCGCATTCCTACCGATACCAAGACCGAGTCG CGCATCTACCCTTTGCCTCACACCTACGTCGTCAAGGATCTGGTCCCTGATTTGACCCACTTCTACAAGCAATAC AAGTCCATCAAGCCATATCTCCAGCGCGATACTCACACCGCAGATGGTCTCGAAAACCGCCAATCCCCCGAGGAT CGCAGAAAGCTTGACGGTCTCTACGAATGCATTCTGTGCGCTTGCTGCTCAACCTCCTGCCCGTCGTACTGGTGG AACAGCGAGGAGTACCTTGGACCCGCCATTCTGCTCCAGTCCTTCCGTTGGTTGATCGATTCCCGTGACGAGAGA ACCGCCGAGCGCAAGGCCGCTCTCGACAACAGCATGAGCGTCTACCGTTGCCACACCATTCTCAACTGCACACGG ACTTGCCCCAAGGGCCTGAACCCAGGTCGCGCAATTGCCGAGATCAAGAAGATGTTGGCCGTCTAG |
| Transcript | >Pro_DTO377G3_2|g2362.t1 ATGGCCTCCCTCCGTACCACTTCGCGATTGTTCGCGGCGTCGCGGCCGATGTTCCGCCCTGCCTTCGCTCGCACC TATGCGACCGTCGAGCCTACTCCCACCGTGCAACCCAAGATCAAGACCTTCAAGGTCTACCGCTGGAACCCGGAC CACCCCAGCGAGAAGCCCCAGATGCAGTCCTACGAGCTCGATCTGAACAAGACCGGACCCATGATGCTTGACGCG CTCATCCGGATAAAGAACGAGCTCGACCCTACCCTCACTTTCCGCAGATCTTGCCGTGAGGGTATCTGCGGTTCT TGCGCCATGAACATCGACGGTGTCAACACTCTCGCCTGCTTGTGCCGCATTCCTACCGATACCAAGACCGAGTCG CGCATCTACCCTTTGCCTCACACCTACGTCGTCAAGGATCTGGTCCCTGATTTGACCCACTTCTACAAGCAATAC AAGTCCATCAAGCCATATCTCCAGCGCGATACTCACACCGCAGATGGTCTCGAAAACCGCCAATCCCCCGAGGAT CGCAGAAAGCTTGACGGTCTCTACGAATGCATTCTGTGCGCTTGCTGCTCAACCTCCTGCCCGTCGTACTGGTGG AACAGCGAGGAGTACCTTGGACCCGCCATTCTGCTCCAGTCCTTCCGTTGGTTGATCGATTCCCGTGACGAGAGA ACCGCCGAGCGCAAGGCCGCTCTCGACAACAGCATGAGCGTCTACCGTTGCCACACCATTCTCAACTGCACACGG ACTTGCCCCAAGGGCCTGAACCCAGGTCGCGCAATTGCCGAGATCAAGAAGATGTTGGCCGTCTAG |
| Gene | >Pro_DTO377G3_2|g2362.t1 ATGGCCTCCCTCCGTACCACTTCGCGATTGTTCGCGGCGTCGCGGCCGATGTTCCGCCCTGCCTTCGCTCGCACC TATGCGACCGTCGAGCCTACTCCCACCGTGCAACCCAAGATCAAGACCTTCAAGGTCTACCGCTGGAACCCGGAC CACCCCAGCGAGAAGCCCCAGATGCAGTCCTACGAGCTCGATCTGAACAAGACCGGACCCATGATGCTTGACGCG CTCATCCGGATAAAGAACGAGCTCGACCCTACCCTCACTTTCCGCAGATCTTGCCGTGAGGGTATCTGCGGTTCT TGCGCCATGAACATCGACGGTGTCAACACTCTCGCCTGCTTGTGTATGTATCTGGATCCGCACGCCCGAGATGTC ATAGCATCCGACAGCTTCCGACTGAATGCTAATCCTTTGTCTGTATAGGCCGCATTCCTACCGATACCAAGACCG AGTCGCGCATCTACCCTTTGCCTCACACCTACGTCGTCAAGGATCTGGTCCCTGATTTGACCCACTTCTACAAGC AATACAAGTCCATCAAGCCATATCTCCAGCGCGATACTCACACCGCAGATGTGAGTTATTTTATATGCCAGCATC ACCTCCAAAAACTAACAATTTTGCCAGGGTCTCGAAAACCGCCAATCCCCCGAGGATCGCAGAAAGCTTGACGGT CTCTACGAATGCATTCTGTGCGCTTGCTGCTCAACCTCCTGCCCGTCGTACTGGTGGAACAGCGAGGAGTACCTT GGACCCGCCATTCTGCTCCAGTCCTTCCGTTGGTTGATCGATTCCCGTGACGAGAGAACCGCCGAGCGCAAGGCC GCTCTCGACAACAGCATGAGCGTCTACCGTTGCCACACCATTCTCAACTGCACACGGACTTGCCCCAAGGGCCTG AACCCAGGTCGCGCAATTGCCGAGATCAAGAAGATGTTGGCCGTCTAG |