Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g236.t1
Gene name
Locationscaffold_01:612665..613702
Strand-
Gene length (bp)1037
Transcript length (bp)813
Coding sequence length (bp)813
Protein length (aa) 271

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00106 adh_short short chain dehydrogenase 4.6E-52 12 207
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 3.6E-34 18 254
PF08659 KR KR domain 7.0E-13 13 138

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g236.t1
MASAMAKRLEGKTIVITGASSGIGKSTAQEFARTSPKNLKLILTARRIDTLKEVAAEITKEVGNGVQVLPVKLDV
SNPEEVSNFVSSLPEEFREIDVLVNNAGLVKGVAQAPSIAAEDIKVMFDTNVTGLINMTQAILPIFKKRSEGGRG
DIINIGSIAGREPYSGGSIYCSTKAAVRSFTDALRKELVATRIRIIEIDPGQVETEFSVVRFYGDKSKADAVYKG
VEPLTGDDIAEVIVFAAGRRENVVIADTLVFPSHQASAGVMHRKS*
Coding >Pro_DTO377G3_2|g236.t1
ATGGCTTCCGCAATGGCAAAGCGCCTCGAAGGCAAGACTATCGTCATTACCGGTGCCTCATCTGGCATTGGAAAG
AGCACTGCCCAGGAGTTCGCCCGTACGTCGCCCAAGAACCTGAAGTTGATCCTTACCGCGCGCCGCATCGACACA
TTGAAGGAGGTCGCGGCGGAGATCACGAAGGAGGTCGGCAATGGTGTCCAGGTTCTTCCCGTCAAGCTGGATGTC
AGCAACCCAGAGGAAGTGAGCAACTTTGTTTCCTCCCTGCCCGAGGAGTTCCGGGAGATTGACGTCCTTGTCAAC
AATGCTGGCTTGGTCAAGGGTGTTGCCCAGGCACCTTCGATTGCTGCCGAGGATATCAAGGTCATGTTTGACACC
AACGTCACTGGTCTCATTAACATGACCCAGGCCATCCTGCCCATCTTCAAGAAGCGCTCTGAGGGTGGCCGTGGC
GATATTATCAACATTGGCAGTATCGCCGGCCGCGAGCCTTACTCTGGTGGTAGCATCTACTGCTCCACCAAGGCG
GCTGTCCGCTCGTTCACTGATGCTCTGAGAAAGGAGCTCGTCGCCACGAGAATCCGTATCATTGAAATCGATCCT
GGTCAAGTTGAGACGGAGTTCTCCGTTGTGCGATTCTATGGAGACAAGTCTAAGGCTGATGCTGTCTACAAGGGC
GTCGAACCATTGACCGGTGATGACATCGCCGAGGTGATTGTCTTTGCAGCTGGGCGTCGCGAGAACGTTGTGATC
GCCGATACCCTGGTCTTCCCCAGCCACCAGGCTTCGGCTGGCGTCATGCACCGCAAGTCGTAA
Transcript >Pro_DTO377G3_2|g236.t1
ATGGCTTCCGCAATGGCAAAGCGCCTCGAAGGCAAGACTATCGTCATTACCGGTGCCTCATCTGGCATTGGAAAG
AGCACTGCCCAGGAGTTCGCCCGTACGTCGCCCAAGAACCTGAAGTTGATCCTTACCGCGCGCCGCATCGACACA
TTGAAGGAGGTCGCGGCGGAGATCACGAAGGAGGTCGGCAATGGTGTCCAGGTTCTTCCCGTCAAGCTGGATGTC
AGCAACCCAGAGGAAGTGAGCAACTTTGTTTCCTCCCTGCCCGAGGAGTTCCGGGAGATTGACGTCCTTGTCAAC
AATGCTGGCTTGGTCAAGGGTGTTGCCCAGGCACCTTCGATTGCTGCCGAGGATATCAAGGTCATGTTTGACACC
AACGTCACTGGTCTCATTAACATGACCCAGGCCATCCTGCCCATCTTCAAGAAGCGCTCTGAGGGTGGCCGTGGC
GATATTATCAACATTGGCAGTATCGCCGGCCGCGAGCCTTACTCTGGTGGTAGCATCTACTGCTCCACCAAGGCG
GCTGTCCGCTCGTTCACTGATGCTCTGAGAAAGGAGCTCGTCGCCACGAGAATCCGTATCATTGAAATCGATCCT
GGTCAAGTTGAGACGGAGTTCTCCGTTGTGCGATTCTATGGAGACAAGTCTAAGGCTGATGCTGTCTACAAGGGC
GTCGAACCATTGACCGGTGATGACATCGCCGAGGTGATTGTCTTTGCAGCTGGGCGTCGCGAGAACGTTGTGATC
GCCGATACCCTGGTCTTCCCCAGCCACCAGGCTTCGGCTGGCGTCATGCACCGCAAGTCGTAA
Gene >Pro_DTO377G3_2|g236.t1
ATGGCTTCCGCAATGGCAAAGCGCCTCGAAGGCAAGACTATCGTCATTACCGGTGCCTCATCTGGCATTGGAAAG
AGCACTGCCCAGGAGTTCGCCCGTACGTCGCCCAAGAACCTGAAGTTGATCCTTACCGCGCGCCGCATCGACACA
TTGAAGGAGGTCGCGGCGGAGATCACGAAGGAGGTCGGCAATGGTGTCCAGGTTCTTCCCGTCAAGCTGGATGTC
AGCAACCCAGAGGAAGTGAGCAACTTTGTTTCCTCCCTGCCCGAGGAGTTCCGGGAGATTGACGTCCTTGTCAAC
AATGCGTGAGTCATGCACACCAAGCTAAACTGATTGATATGCACGGTCGATACTGACATTCACGGTGAAAGTGGC
TTGGTCAAGGGTGTTGCCCAGGCACCTTCGATTGCTGCCGAGGATATCAAGGTCATGTTTGACACCAACGTCACT
GGTCTCATTAACATGACCCAGGCCATCCTGCCCATCTTCAAGAAGCGCTCTGAGGGTGGCCGTGGCGATATTATC
AACATTGGCAGTATCGCCGGCCGCGAGCCTTACTCTGGTGGTAGCATCTACTGCTCCACCAAGGCGGCTGTCCGC
TCGTTCACTGATGCTCTGAGAAAGGAGCTCGTCGCCACGAGAATCCGTATCATTGAAATCGATCCTGGTCAAGTT
GAGACGGTATGGGCATCGCATATATTATTCGCCTTTGATATGAAGCTAATATCGTGATTAGGAGTTCTCCGTTGT
GCGATTCTATGGAGACAAGTCTAAGGCTGATGCTGTCTACAAGTAAGCCATGCTAAGGGAACTGAAACAGAATAT
AGTTAACAATTGGCAGGGGCGTCGAACCATTGACCGGTGATGACATCGCCGAGGTGATTGTCTTTGCAGCTGGGC
GTCGCGAGAACGTTGTGATCGCCGATACCCTGGTCTTCCCCAGCCACCAGGTAAGCTTATTTTGCGGTTAAATCT
TGTTATAGACATGTTCTGACAATCTATAGGCTTCGGCTGGCGTCATGCACCGCAAGTCGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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