Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2357.t1
Gene name
Locationscaffold_02:2351062..2352870
Strand-
Gene length (bp)1808
Transcript length (bp)1755
Coding sequence length (bp)1755
Protein length (aa) 585

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01425 Amidase Amidase 4.1E-68 83 385

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 21 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
3d_25C Three days - 25 degrees Celsius 144.93 87.70 202.16
5d_25C Five days - 25 degrees Celsius 68.09 39.20 96.99
7d_25C Seven days - 25 degrees Celsius 75.80 42.20 109.41
10d_25C Ten days - 25 degrees Celsius 27.15 13.13 41.16
7d_15C Seven days - 15 degrees Celsius 53.96 27.14 80.78
7d_30C Seven days - 30 degrees Celsius 30.10 16.59 43.60

Differential expression

Label1 Label2 Q-value Significant difference
3d_25C 5d_25C 0.000700 yes
3d_25C 7d_25C 0.003197 yes
3d_25C 7d_15C 0.000700 yes
3d_25C 7d_30C 0.000700 yes
3d_25C 10d_25C 0.000700 yes
5d_25C 7d_25C 0.740341 no
5d_25C 7d_15C 0.429572 no
5d_25C 7d_30C 0.000700 yes
5d_25C 10d_25C 0.000700 yes
7d_25C 7d_15C 0.216893 no
7d_25C 7d_30C 0.000700 yes
7d_25C 10d_25C 0.000700 yes
7d_15C 7d_30C 0.027948 yes
7d_15C 10d_25C 0.011388 yes
7d_30C 10d_25C 0.777293 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2357.t1
MAPLIQTLVSGLALVSSVIAQESDCLVDSQILVDPYLYDFPRLGGNGAAQFAMRPCHGFKLEEATIDQIQAELKN
GTFTGVQLLECYMDRVHQTQPYLNAILQVNPDAFTIAKKLDEERAAGTVRGPLHGIPFIVKDNIASKDRLETTAG
SWALLGNVVPRDSHVVHGMRKAGALLLGKAALSEWADMRSNNYSEGFSARGGQCRSAYNFTVNPGGSSTGSGVAV
AANLVPIALGTETDGSVINPAQRNSIVGIKPTVGLTSRAGVIPESTHQDTVGTFGKTVRDAVYALDAIYGIDPRD
NYTSAQEGLTPVGGYTQFLSNQTALKGAVFGIPWKSFWALGDADQIAQLLDLVKLIESAGATVINGTELPHYKEI
VSPDGWNWDYGTTRGYSNESSYSYIKVDFYNNLRDYLSEVENTNVRSVEDLVQYNIDNYGSEGGLPGIHPAFGSG
QDGLIASLESKGIMNETYFQALEFCRRTTREEGIDAALKHGNRTLDGLLVPPDVAQSVEIAAQAGYPVITVPGGV
SDVSGMPFGLAIMNTAFSEATLIKYASAIEDLKKNHGPKYDRALPEWRGYLQRPLPVAF*
Coding >Pro_DTO377G3_2|g2357.t1
ATGGCACCTCTAATTCAAACATTGGTGAGCGGTCTCGCCTTGGTGAGCTCCGTTATTGCTCAAGAGTCCGACTGT
TTGGTCGACTCCCAGATCCTCGTCGATCCCTACCTTTATGACTTCCCTCGCCTGGGCGGTAATGGCGCTGCACAG
TTCGCTATGCGCCCCTGTCACGGTTTCAAGCTGGAGGAGGCTACGATCGATCAGATCCAAGCCGAGCTGAAGAAT
GGCACTTTCACTGGCGTCCAGTTGCTGGAGTGCTACATGGACCGTGTCCACCAGACCCAGCCTTATTTGAATGCT
ATCCTGCAAGTGAACCCGGATGCTTTCACCATTGCCAAGAAGCTCGATGAGGAGCGTGCTGCAGGCACTGTCCGT
GGTCCTCTTCACGGTATTCCCTTCATTGTCAAGGACAACATCGCCAGTAAGGATCGTTTGGAGACCACTGCCGGC
AGCTGGGCTCTTCTCGGTAATGTCGTGCCCCGTGATTCTCATGTCGTTCACGGCATGCGCAAGGCCGGTGCTCTG
CTTCTCGGCAAGGCTGCTCTGAGTGAGTGGGCCGATATGCGCTCCAACAACTACTCCGAAGGCTTCAGTGCCCGT
GGTGGTCAGTGCCGCAGTGCTTACAACTTCACCGTTAACCCCGGTGGTAGCAGCACTGGCTCTGGTGTTGCTGTC
GCTGCTAACCTGGTGCCTATTGCTCTTGGAACCGAGACCGATGGCTCTGTCATCAACCCTGCTCAGCGCAACTCT
ATTGTTGGCATCAAGCCCACCGTCGGTCTGACCTCGCGTGCTGGTGTCATCCCGGAATCGACCCACCAGGACACC
GTCGGCACCTTCGGCAAGACCGTCCGTGATGCTGTTTACGCCCTCGATGCCATCTACGGCATTGACCCCCGCGAC
AACTACACCTCCGCTCAGGAGGGTCTCACCCCCGTCGGTGGATACACCCAGTTTCTGAGCAACCAGACCGCTCTT
AAGGGCGCCGTCTTCGGTATTCCCTGGAAGTCCTTCTGGGCCCTCGGCGACGCCGACCAAATCGCCCAGCTCCTT
GATCTGGTCAAGCTGATCGAGTCCGCTGGCGCCACCGTCATCAACGGCACCGAGCTGCCCCACTATAAGGAGATT
GTCTCGCCCGACGGCTGGAACTGGGACTATGGCACCACCCGCGGCTACTCCAACGAGTCCTCTTACTCCTACATC
AAGGTTGACTTCTACAACAACCTGCGTGACTACCTGTCCGAGGTCGAGAACACTAACGTCCGCTCTGTCGAGGAC
CTCGTCCAGTACAACATCGATAACTACGGCTCCGAGGGTGGTCTGCCCGGTATCCACCCTGCCTTCGGCTCTGGC
CAGGACGGTCTCATCGCTTCCCTTGAGAGCAAGGGCATTATGAACGAGACATACTTCCAGGCTTTGGAGTTCTGC
CGGCGCACTACCCGTGAGGAGGGTATCGATGCTGCTTTGAAGCACGGCAACCGTACTCTCGACGGTCTCCTTGTG
CCTCCCGATGTCGCCCAGAGCGTTGAGATTGCCGCCCAGGCTGGATACCCCGTTATTACTGTTCCTGGTGGCGTC
AGCGATGTCTCGGGCATGCCCTTTGGCCTTGCTATCATGAACACTGCTTTCTCCGAGGCCACCTTGATCAAGTAC
GCCAGTGCTATCGAGGATCTGAAGAAGAACCACGGCCCCAAGTACGACCGTGCACTGCCTGAGTGGCGCGGCTAC
CTGCAGCGCCCTCTCCCCGTCGCTTTCTAG
Transcript >Pro_DTO377G3_2|g2357.t1
ATGGCACCTCTAATTCAAACATTGGTGAGCGGTCTCGCCTTGGTGAGCTCCGTTATTGCTCAAGAGTCCGACTGT
TTGGTCGACTCCCAGATCCTCGTCGATCCCTACCTTTATGACTTCCCTCGCCTGGGCGGTAATGGCGCTGCACAG
TTCGCTATGCGCCCCTGTCACGGTTTCAAGCTGGAGGAGGCTACGATCGATCAGATCCAAGCCGAGCTGAAGAAT
GGCACTTTCACTGGCGTCCAGTTGCTGGAGTGCTACATGGACCGTGTCCACCAGACCCAGCCTTATTTGAATGCT
ATCCTGCAAGTGAACCCGGATGCTTTCACCATTGCCAAGAAGCTCGATGAGGAGCGTGCTGCAGGCACTGTCCGT
GGTCCTCTTCACGGTATTCCCTTCATTGTCAAGGACAACATCGCCAGTAAGGATCGTTTGGAGACCACTGCCGGC
AGCTGGGCTCTTCTCGGTAATGTCGTGCCCCGTGATTCTCATGTCGTTCACGGCATGCGCAAGGCCGGTGCTCTG
CTTCTCGGCAAGGCTGCTCTGAGTGAGTGGGCCGATATGCGCTCCAACAACTACTCCGAAGGCTTCAGTGCCCGT
GGTGGTCAGTGCCGCAGTGCTTACAACTTCACCGTTAACCCCGGTGGTAGCAGCACTGGCTCTGGTGTTGCTGTC
GCTGCTAACCTGGTGCCTATTGCTCTTGGAACCGAGACCGATGGCTCTGTCATCAACCCTGCTCAGCGCAACTCT
ATTGTTGGCATCAAGCCCACCGTCGGTCTGACCTCGCGTGCTGGTGTCATCCCGGAATCGACCCACCAGGACACC
GTCGGCACCTTCGGCAAGACCGTCCGTGATGCTGTTTACGCCCTCGATGCCATCTACGGCATTGACCCCCGCGAC
AACTACACCTCCGCTCAGGAGGGTCTCACCCCCGTCGGTGGATACACCCAGTTTCTGAGCAACCAGACCGCTCTT
AAGGGCGCCGTCTTCGGTATTCCCTGGAAGTCCTTCTGGGCCCTCGGCGACGCCGACCAAATCGCCCAGCTCCTT
GATCTGGTCAAGCTGATCGAGTCCGCTGGCGCCACCGTCATCAACGGCACCGAGCTGCCCCACTATAAGGAGATT
GTCTCGCCCGACGGCTGGAACTGGGACTATGGCACCACCCGCGGCTACTCCAACGAGTCCTCTTACTCCTACATC
AAGGTTGACTTCTACAACAACCTGCGTGACTACCTGTCCGAGGTCGAGAACACTAACGTCCGCTCTGTCGAGGAC
CTCGTCCAGTACAACATCGATAACTACGGCTCCGAGGGTGGTCTGCCCGGTATCCACCCTGCCTTCGGCTCTGGC
CAGGACGGTCTCATCGCTTCCCTTGAGAGCAAGGGCATTATGAACGAGACATACTTCCAGGCTTTGGAGTTCTGC
CGGCGCACTACCCGTGAGGAGGGTATCGATGCTGCTTTGAAGCACGGCAACCGTACTCTCGACGGTCTCCTTGTG
CCTCCCGATGTCGCCCAGAGCGTTGAGATTGCCGCCCAGGCTGGATACCCCGTTATTACTGTTCCTGGTGGCGTC
AGCGATGTCTCGGGCATGCCCTTTGGCCTTGCTATCATGAACACTGCTTTCTCCGAGGCCACCTTGATCAAGTAC
GCCAGTGCTATCGAGGATCTGAAGAAGAACCACGGCCCCAAGTACGACCGTGCACTGCCTGAGTGGCGCGGCTAC
CTGCAGCGCCCTCTCCCCGTCGCTTTCTAG
Gene >Pro_DTO377G3_2|g2357.t1
ATGGCACCTCTAATTCAAACATTGGTGAGCGGTCTCGCCTTGGTGAGCTCCGTTATTGCTCAAGAGTCCGACTGT
TTGGTCGACTCCCAGATCCTCGTCGATCCCTACCTTTATGACTTCCCTCGCCTGGGCGGTAATGGCGCTGCACAG
TTCGCTATGCGCCCCTGTCACGGTTTCAAGCTGGAGGAGGCTACGATCGATCAGATCCAAGCCGAGCTGAAGAAT
GGCACTTTCACTGGCGTCCAGTTGCTGGAGTGCTACATGGACCGTGTCCACCAGACCCAGCCTTATTTGAAGTAT
GTTAGTTATGTTGAATCTCGTCAAAATTGTTGACTAACAGCCTTGCTAGTGCTATCCTGCAAGTGAACCCGGATG
CTTTCACCATTGCCAAGAAGCTCGATGAGGAGCGTGCTGCAGGCACTGTCCGTGGTCCTCTTCACGGTATTCCCT
TCATTGTCAAGGACAACATCGCCAGTAAGGATCGTTTGGAGACCACTGCCGGCAGCTGGGCTCTTCTCGGTAATG
TCGTGCCCCGTGATTCTCATGTCGTTCACGGCATGCGCAAGGCCGGTGCTCTGCTTCTCGGCAAGGCTGCTCTGA
GTGAGTGGGCCGATATGCGCTCCAACAACTACTCCGAAGGCTTCAGTGCCCGTGGTGGTCAGTGCCGCAGTGCTT
ACAACTTCACCGTTAACCCCGGTGGTAGCAGCACTGGCTCTGGTGTTGCTGTCGCTGCTAACCTGGTGCCTATTG
CTCTTGGAACCGAGACCGATGGCTCTGTCATCAACCCTGCTCAGCGCAACTCTATTGTTGGCATCAAGCCCACCG
TCGGTCTGACCTCGCGTGCTGGTGTCATCCCGGAATCGACCCACCAGGACACCGTCGGCACCTTCGGCAAGACCG
TCCGTGATGCTGTTTACGCCCTCGATGCCATCTACGGCATTGACCCCCGCGACAACTACACCTCCGCTCAGGAGG
GTCTCACCCCCGTCGGTGGATACACCCAGTTTCTGAGCAACCAGACCGCTCTTAAGGGCGCCGTCTTCGGTATTC
CCTGGAAGTCCTTCTGGGCCCTCGGCGACGCCGACCAAATCGCCCAGCTCCTTGATCTGGTCAAGCTGATCGAGT
CCGCTGGCGCCACCGTCATCAACGGCACCGAGCTGCCCCACTATAAGGAGATTGTCTCGCCCGACGGCTGGAACT
GGGACTATGGCACCACCCGCGGCTACTCCAACGAGTCCTCTTACTCCTACATCAAGGTTGACTTCTACAACAACC
TGCGTGACTACCTGTCCGAGGTCGAGAACACTAACGTCCGCTCTGTCGAGGACCTCGTCCAGTACAACATCGATA
ACTACGGCTCCGAGGGTGGTCTGCCCGGTATCCACCCTGCCTTCGGCTCTGGCCAGGACGGTCTCATCGCTTCCC
TTGAGAGCAAGGGCATTATGAACGAGACATACTTCCAGGCTTTGGAGTTCTGCCGGCGCACTACCCGTGAGGAGG
GTATCGATGCTGCTTTGAAGCACGGCAACCGTACTCTCGACGGTCTCCTTGTGCCTCCCGATGTCGCCCAGAGCG
TTGAGATTGCCGCCCAGGCTGGATACCCCGTTATTACTGTTCCTGGTGGCGTCAGCGATGTCTCGGGCATGCCCT
TTGGCCTTGCTATCATGAACACTGCTTTCTCCGAGGCCACCTTGATCAAGTACGCCAGTGCTATCGAGGATCTGA
AGAAGAACCACGGCCCCAAGTACGACCGTGCACTGCCTGAGTGGCGCGGCTACCTGCAGCGCCCTCTCCCCGTCG
CTTTCTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail