© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g2353.t1 |
| Gene name | |
| Location | scaffold_02:2341456..2342422 |
| Strand | - |
| Gene length (bp) | 966 |
| Transcript length (bp) | 741 |
| Coding sequence length (bp) | 741 |
| Protein length (aa) | 247 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF13561 | adh_short_C2 | Enoyl-(Acyl carrier protein) reductase | 4.2E-48 | 16 | 245 |
| PF00106 | adh_short | short chain dehydrogenase | 3.6E-41 | 8 | 201 |
| PF08659 | KR | KR domain | 3.5E-10 | 9 | 165 |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 22 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 5 | 27 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g2353.t1 MASSPTPVVLITAGSAGLGAATVRLFAKHGYRVVINYNANAQRAEALCAELGGDGHVTIQANLGSRDDVERLVRE AYAQMGRLDVVFSNGGWTRFSDTTSLDDNAVEADWDRAFAMNVKSHLWLLQAARPHLDETEGAFVTTSSITGLQG MGSSLAYSATKAAQLHMVRGLATMVAPKIRVNSVSPGLLQTEWAERFSEEQKEAHREKTKLKRFVAVEDVAAQVL SLATSKSMTGANIIIDAGYTL* |
| Coding | >Pro_DTO377G3_2|g2353.t1 ATGGCATCTTCACCGACTCCCGTAGTCCTCATCACAGCCGGTAGCGCAGGCCTGGGTGCCGCGACCGTCCGTCTC TTCGCAAAACACGGGTACCGCGTCGTGATTAACTACAACGCGAACGCGCAGCGTGCCGAAGCCCTGTGCGCCGAG CTTGGTGGCGATGGCCACGTCACGATCCAGGCCAACCTGGGCTCGCGGGACGACGTCGAGCGCCTTGTGCGTGAG GCCTACGCGCAGATGGGCCGCCTGGACGTCGTCTTCTCTAACGGCGGCTGGACTCGCTTTAGCGACACGACGTCG CTGGACGACAACGCCGTCGAAGCGGACTGGGACCGTGCCTTCGCTATGAACGTCAAGTCGCACCTCTGGCTGCTG CAGGCGGCGCGACCGCACCTCGACGAGACGGAGGGGGCGTTCGTCACGACGTCTTCTATTACGGGCCTGCAGGGT ATGGGGAGCTCGTTGGCTTATTCGGCTACGAAGGCTGCACAGCTACACATGGTCAGGGGCCTCGCCACCATGGTG GCGCCCAAGATCCGGGTGAATAGCGTGTCGCCTGGGCTGCTTCAAACGGAATGGGCAGAGCGGTTTAGCGAAGAG CAGAAGGAAGCCCACAGGGAAAAAACCAAGCTGAAGAGGTTTGTCGCAGTCGAGGATGTGGCCGCCCAGGTTCTT AGTCTGGCGACGTCGAAGAGTATGACTGGGGCAAACATAATCATTGATGCTGGATATACGCTATAG |
| Transcript | >Pro_DTO377G3_2|g2353.t1 ATGGCATCTTCACCGACTCCCGTAGTCCTCATCACAGCCGGTAGCGCAGGCCTGGGTGCCGCGACCGTCCGTCTC TTCGCAAAACACGGGTACCGCGTCGTGATTAACTACAACGCGAACGCGCAGCGTGCCGAAGCCCTGTGCGCCGAG CTTGGTGGCGATGGCCACGTCACGATCCAGGCCAACCTGGGCTCGCGGGACGACGTCGAGCGCCTTGTGCGTGAG GCCTACGCGCAGATGGGCCGCCTGGACGTCGTCTTCTCTAACGGCGGCTGGACTCGCTTTAGCGACACGACGTCG CTGGACGACAACGCCGTCGAAGCGGACTGGGACCGTGCCTTCGCTATGAACGTCAAGTCGCACCTCTGGCTGCTG CAGGCGGCGCGACCGCACCTCGACGAGACGGAGGGGGCGTTCGTCACGACGTCTTCTATTACGGGCCTGCAGGGT ATGGGGAGCTCGTTGGCTTATTCGGCTACGAAGGCTGCACAGCTACACATGGTCAGGGGCCTCGCCACCATGGTG GCGCCCAAGATCCGGGTGAATAGCGTGTCGCCTGGGCTGCTTCAAACGGAATGGGCAGAGCGGTTTAGCGAAGAG CAGAAGGAAGCCCACAGGGAAAAAACCAAGCTGAAGAGGTTTGTCGCAGTCGAGGATGTGGCCGCCCAGGTTCTT AGTCTGGCGACGTCGAAGAGTATGACTGGGGCAAACATAATCATTGATGCTGGATATACGCTATAG |
| Gene | >Pro_DTO377G3_2|g2353.t1 ATGGCATCTTCACCGACTCCCGTAGTCCTCATCACAGCCGGTAGCGCAGGCCTGGGTGCCGCGACCGTCCGTCTC TTCGCAAAACACGGGTACCGCGTCGTGATTAACTACAACGCGAACGCGCAGCGTGCCGAAGCCCTGTGCGCCGAG CTTGGTGGCGATGGCCACGTCACGATCCAGGCCAACCTGGGCTCGCGGGACGACGTCGAGCGCCTTGTGCGTGAG GCCTACGCGCAGATGGGCCGCCTGGACGTCGTCTTCTCTAACGGCGGCTGGACTCGCTTTAGCGACACGACGTCG CTGGACGACAACGCCGTCGAAGCGGACTGGGACCGTGCCTTCGCTATGAACGTCAAGTCGCACCTCTGGCTGCTG CAGGCGGCGCGACCGCACCTCGACGAGACGGAGGGGGCGTTCGTCACGACGTCTTCTATTACGGGCCTGCAGGGT ATGGGGAGCTCGTTGGTACGTTTCCTTGACCCCGGGTAGCTTGGTATTGGAATACCACGTCGAGGATTGCGTAAG TTATCGAGAAACTAACAACGTCTTGTCGTTCAGGCTTATTCGGCTACGAAGGCTGCACAGCTACACATGGTCAGG GGCCTCGCCACCATGGTGGCGCCCAAGATCCGGGTGAATAGCGTGTCGCCTGGGCTGCTTCAAACGGTGAGGATT TCCCCGTCTATCTACCATGAGTGATAGGAATGAGGGCTAATCTTTTAATCACCAGGAATGGGCAGAGCGGTTTAG CGAAGAGCAGAAGGAAGCCCACAGGGAAAAAACCAAGCTGAAGAGGTTTGTCGCAGTCGAGGTAAGTTGTTTGAA CCCCAACCTTTCTGTCACTTCAACGGTGTGTTAACTTATTGGCACCACCATTAGGATGTGGCCGCCCAGGTTCTT AGTCTGGCGACGTCGAAGAGTATGACTGGGGCAAACATAATCATTGATGCTGGATATACGCTATAG |