Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2348.t1
Gene name
Locationscaffold_02:2332898..2334079
Strand+
Gene length (bp)1181
Transcript length (bp)897
Coding sequence length (bp)897
Protein length (aa) 299

Overview

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13561 adh_short_C2 Enoyl-(Acyl carrier protein) reductase 9.2E-34 23 289
PF00106 adh_short short chain dehydrogenase 1.7E-33 16 237
PF08659 KR KR domain 3.5E-07 19 111

GO

(None)

Deeploc

Deeploc data not available for this genome

SignalP

(None)

Transmembrane Domains

(None)

Transcription Factor Class

(None)

CAZymes

(None)

Secondary Metabolism

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Orthologs

Orthofinder run ID2
Orthogroup4984
Change Orthofinder run
Species Protein ID
Penicillium roqueforti DTO002I6 Pro_DTO002I6_2|g5579.t1
Penicillium roqueforti DTO003C3 Pro_DTO003C3_2|g1487.t1
Penicillium roqueforti DTO003H1 (CBS 147308) Pro_DTO003H1_2|g7954.t1
Penicillium roqueforti DTO006G1 Pro_DTO006G1_2|g3100.t1
Penicillium roqueforti DTO006G7 Pro_DTO006G7_3|g1593.t1
Penicillium roqueforti DTO012A1 Pro_DTO012A1_2|g63.t1
Penicillium roqueforti DTO012A2 (CBS 147309) Pro_DTO012A2_2|g2856.t1
Penicillium roqueforti DTO012A6 (CBS 147310) Pro_DTO012A6_2|g1954.t1
Penicillium roqueforti DTO012A7 Pro_DTO012A7_2|g1047.t1
Penicillium roqueforti DTO012A8 Pro_DTO012A8_2|g638.t1
Penicillium roqueforti DTO012A9 Pro_DTO012A9_2|g1719.t1
Penicillium roqueforti DTO013E5 Pro_DTO013E5_2|g843.t1
Penicillium roqueforti DTO013F2 Pro_DTO013F2_2|g6441.t1
Penicillium roqueforti DTO013F5 (CBS 147311) Pro_DTO013F5_2|g2040.t1
Penicillium roqueforti DTO027I6 Pro_DTO027I6_2|g1052.t1
Penicillium roqueforti DTO032C6 Pro_DTO032C6_2|g6470.t1
Penicillium roqueforti DTO039G3 Pro_DTO039G3_2|g4389.t1
Penicillium roqueforti DTO046C5 Pro_DTO046C5_2|g1966.t1
Penicillium roqueforti DTO070G2 (CBS 147317) Pro_DTO070G2_2|g3696.t1
Penicillium roqueforti DTO081F9 (CBS 147318) Pro_DTO081F9_2|g2424.t1
Penicillium roqueforti DTO101D6 (CBS 147325) Pro_DTO101D6_2|g3738.t1
Penicillium roqueforti DTO102I9 (CBS 147326) Pro_DTO102I9_2|g448.t1
Penicillium roqueforti DTO126G2 (CBS 147330) Pro_DTO126G2_2|g1922.t1
Penicillium roqueforti DTO127F7 (CBS 147331) Pro_DTO127F7_2|g1977.t1
Penicillium roqueforti DTO127F9 (CBS 147332) Pro_DTO127F9_2|g489.t1
Penicillium roqueforti DTO130C1 (CBS 147333) Pro_DTO130C1_2|g285.t1
Penicillium roqueforti DTO163C3 (CBS 147337) Pro_DTO163C3_2|g1905.t1
Penicillium roqueforti DTO163F5 (CBS 147338) Pro_DTO163F5_2|g7663.t1
Penicillium roqueforti DTO163G4 (CBS 147339) Pro_DTO163G4_2|g2161.t1
Penicillium roqueforti DTO265D5 (CBS 147372) Pro_DTO265D5_2|g3841.t1
Penicillium roqueforti DTO369A1 (CBS 147354) Pro_DTO369A1_2|g1961.t1
Penicillium roqueforti DTO375B1 (CBS 147355) Pro_DTO375B1_2|g1950.t1
Penicillium roqueforti DTO377G2 (LCP 96.3914a) Pro_DTO377G2_2|g6368.t1
Penicillium roqueforti LCP96 04111 Pro_DTO377G3_2|g2348.t1 (this protein)

Sequences

Type of sequenceSequence
Locus Download genbank file of locus Download genbank file of locus (reverse complement)
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2348.t1
MSSLSIEQLFGVRGYVAAVTGGSSGLGFMICKGLVTNGAKVYVIALPTEPIDEKVAELNEIGQSTGGSAHGLPCN
VTDKDAIARVAAYISERESHLDILISNAGIRRDPPVACDVLTASLSELQTSMWSSRHSDWADTFCVNTTAHYFLS
VALLPLLAAASQLDLGGGRKGKDDGRGVIVITSSCASMHNATNVDLTSYATSKAATDHLVRLLAAKFSRFYVRVS
GINPGFVPSNMNPVGEEGNMFSSLFDKVPAKRAGNEDDIAGAVLYLVSRAGAYVDGVSLCVDGGRILLANGQE*
Coding >Pro_DTO377G3_2|g2348.t1
ATGTCTTCACTTAGCATTGAGCAGCTTTTCGGTGTCAGGGGCTACGTCGCAGCCGTCACAGGAGGGAGCAGCGGT
CTGGGCTTCATGATATGCAAAGGGCTTGTGACAAACGGCGCAAAGGTCTACGTTATCGCCTTGCCAACGGAGCCC
ATTGACGAGAAGGTGGCGGAGCTAAATGAAATCGGCCAGTCGACGGGTGGAAGCGCACACGGATTACCCTGCAAT
GTCACGGACAAGGATGCCATTGCTCGCGTCGCTGCCTACATAAGCGAGCGAGAGAGCCATCTGGACATTCTCATC
TCCAACGCCGGCATAAGGAGAGATCCTCCTGTGGCCTGCGACGTCCTTACCGCCTCTCTATCCGAGCTGCAGACG
TCCATGTGGTCGTCGCGCCACTCGGACTGGGCTGACACATTCTGCGTCAACACGACGGCACACTACTTCCTCTCG
GTCGCGTTGCTGCCTCTTCTAGCGGCGGCCTCGCAGCTCGACCTAGGAGGCGGCCGCAAGGGCAAGGATGACGGC
CGCGGCGTCATCGTCATCACGAGCTCCTGCGCTAGCATGCACAACGCTACCAATGTGGACTTGACCAGCTACGCG
ACGAGCAAAGCGGCCACCGACCACCTGGTCAGGCTGCTGGCTGCCAAATTCAGCCGTTTTTACGTGCGCGTGTCG
GGCATCAACCCAGGCTTTGTCCCTAGCAACATGAATCCCGTAGGGGAAGAAGGGAACATGTTCAGCTCCCTGTTT
GACAAAGTACCCGCCAAAAGGGCGGGTAACGAGGATGATATTGCTGGCGCAGTTCTCTATCTGGTCAGCCGGGCC
GGCGCTTATGTCGATGGGGTGTCCCTTTGTGTTGACGGTGGTCGTATTCTTCTTGCTAATGGCCAAGAGTAA
Transcript >Pro_DTO377G3_2|g2348.t1
ATGTCTTCACTTAGCATTGAGCAGCTTTTCGGTGTCAGGGGCTACGTCGCAGCCGTCACAGGAGGGAGCAGCGGT
CTGGGCTTCATGATATGCAAAGGGCTTGTGACAAACGGCGCAAAGGTCTACGTTATCGCCTTGCCAACGGAGCCC
ATTGACGAGAAGGTGGCGGAGCTAAATGAAATCGGCCAGTCGACGGGTGGAAGCGCACACGGATTACCCTGCAAT
GTCACGGACAAGGATGCCATTGCTCGCGTCGCTGCCTACATAAGCGAGCGAGAGAGCCATCTGGACATTCTCATC
TCCAACGCCGGCATAAGGAGAGATCCTCCTGTGGCCTGCGACGTCCTTACCGCCTCTCTATCCGAGCTGCAGACG
TCCATGTGGTCGTCGCGCCACTCGGACTGGGCTGACACATTCTGCGTCAACACGACGGCACACTACTTCCTCTCG
GTCGCGTTGCTGCCTCTTCTAGCGGCGGCCTCGCAGCTCGACCTAGGAGGCGGCCGCAAGGGCAAGGATGACGGC
CGCGGCGTCATCGTCATCACGAGCTCCTGCGCTAGCATGCACAACGCTACCAATGTGGACTTGACCAGCTACGCG
ACGAGCAAAGCGGCCACCGACCACCTGGTCAGGCTGCTGGCTGCCAAATTCAGCCGTTTTTACGTGCGCGTGTCG
GGCATCAACCCAGGCTTTGTCCCTAGCAACATGAATCCCGTAGGGGAAGAAGGGAACATGTTCAGCTCCCTGTTT
GACAAAGTACCCGCCAAAAGGGCGGGTAACGAGGATGATATTGCTGGCGCAGTTCTCTATCTGGTCAGCCGGGCC
GGCGCTTATGTCGATGGGGTGTCCCTTTGTGTTGACGGTGGTCGTATTCTTCTTGCTAATGGCCAAGAGTAA
Gene >Pro_DTO377G3_2|g2348.t1
ATGTCTTCACTTAGCATTGAGCAGCTTTTCGGTGTCAGGGGCTACGTCGCAGCCGTCACAGGAGGGAGCAGCGGT
CTGGGCTTCATGATATGCAAAGTAACTACGCCGAACTCCGCGAAATGTTGCATATATCGATACCTTGGAACACTT
TCTGACCTAGGTGGTTGTGGCAGGGGCTTGTGACAAACGGCGCAAAGGTCTACGTTATCGCCTTGCCAACGGAGC
CCATTGACGAGAAGGTGGCGGAGCTAAATGAAATCGGCCAGTCGACGGGTGGAAGCGCACACGGGTATGTTTACC
CAAGCCGTGTCCGCTATGTCGACTAATAACATGTGTACACGGGCCAGATTACCCTGCAATGTCACGGACAAGGAT
GCCATTGCTCGCGTCGCTGCCTACATAAGCGAGCGAGAGAGCCATCTGGACATTCTCATCTCCAACGCCGGCATA
AGGAGAGATCCTCCTGTGGCCTGCGACGTCCTTACCGCCTCTCTATCCGAGCTGCAGACGTCCATGTGGTCGTCG
CGCCACTCGGACTGGGCTGACACATTCTGCGTCAACACGACGGCACACTACTTCCTCTCGGTCGCGTTGCTGCCT
CTTCTAGCGGCGGCCTCGCAGCTCGACCTAGGAGGCGGCCGCAAGGGCAAGGATGACGGCCGCGGCGTCATCGTC
ATCACGAGCTCCTGCGCTAGCATGCACAACGCTACCAATGTGGACTTGACCAGCTACGCGACGAGCAAAGCGGCC
ACCGACCACCTGGTCAGGCTGCTGGCTGCCAAATTCAGCCGTTTTTACGTGCGCGTGTCGGGCATCAACCCAGGC
TGTGAGTGCTTCGACTCTTATTGGATTGGAAAGCAGCATTGTGCATCCATCAGACTTCATGGGTACGGTAATGGC
TAATTCTTCATCCTTGTAGTTGTCCCTAGCAACATGAATCCCGTAGGGGAAGAAGGGAACATGTTCAGCTCCCTG
TTTGACAAAGTACCCGCCAAAAGGGCGGGTAACGAGGATGATATTGCTGGCGCAGTTCTCTATCTGGTCAGCCGG
GCCGGCGTACGTTCTTCTTATTCTCTAACCACAACCCTTGAACCCCGCACTAACAGCTACAGGCTTATGTCGATG
GGGTGTCCCTTTGTGTTGACGGTGGTCGTATTCTTCTTGCTAATGGCCAAGAGTAA

© 2023 - Robin Ohm - Utrecht University - The Netherlands

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