© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g2345.t1 |
| Gene name | |
| Location | scaffold_02:2326173..2328062 |
| Strand | - |
| Gene length (bp) | 1889 |
| Transcript length (bp) | 1680 |
| Coding sequence length (bp) | 1680 |
| Protein length (aa) | 560 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00324 | AA_permease | Amino acid permease | 1.4E-97 | 52 | 516 |
| PF13520 | AA_permease_2 | Amino acid permease | 3.3E-17 | 54 | 478 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 49 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 76 | 95 | 19 |
| 2 | 127 | 149 | 22 |
| 3 | 162 | 184 | 22 |
| 4 | 189 | 211 | 22 |
| 5 | 281 | 303 | 22 |
| 6 | 308 | 330 | 22 |
| 7 | 343 | 365 | 22 |
| 8 | 385 | 407 | 22 |
| 9 | 462 | 484 | 22 |
| 10 | 488 | 510 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g2345.t1 MSASKYFEKGPPSPSIATEPSSKIDDDVQPGMSANISSGSQHLHRKLRGSEVQLFAIGGAIGTSLYVQMGQALPK GGPAGLFIAFFIWGAVMWAVNECFAEMVTYLPVPSPFIRFGSEWVDGALGFAMAWNFFLNMAFLVPFEIVAMNIM ITFWTDKVPVEAIIVAMIVLYAILNVATVRYFGISEFYLSIFKVILMLGLFFFTFITMLGGNPLHDRYGFRYWNH PGAFVEHIVSGGTGKFLGVLSCVYQASFSICGPEYISMVAAETENPRKILPPAYRSFVWRILLFFVGSALCMGIV IPYNDTTLMGILGGSLTGSGTGAASPYVIAMQRLKINGLPSLVNALIMTSIFSAGNGLLFSATRTLHGMSLEGHA PRFFSWCTKAGVPLWALLFSLSFCLLAFLQVSSSSANVMNYLVDLVTCCQLINYLCTAATYRHFFSSLKRQGISR DTLPYKGRFQPYTSYFAMGGTLFMLLAGGYDVFIKGGWDVMWFCLDYAMIGFFIVLFLFWKIVFRSRYVWPGTAD LSLGGIKEEIDQYEAALIPREQGLVDKVVGKIFE* |
| Coding | >Pro_DTO377G3_2|g2345.t1 ATGTCAGCCTCCAAGTATTTTGAGAAGGGCCCTCCTTCACCATCCATCGCCACGGAGCCTTCGTCCAAGATCGAC GATGATGTTCAGCCGGGCATGTCTGCGAACATATCCTCAGGGTCGCAGCATCTGCACCGCAAGCTGCGAGGATCG GAAGTCCAGCTTTTCGCTATTGGAGGAGCCATTGGTACCTCTCTCTATGTGCAAATGGGCCAGGCTCTCCCCAAG GGTGGCCCCGCAGGTCTCTTCATCGCCTTCTTCATCTGGGGCGCCGTCATGTGGGCCGTCAACGAGTGCTTCGCC GAGATGGTGACTTACCTACCCGTGCCCTCGCCCTTCATCCGCTTTGGCAGCGAATGGGTTGATGGCGCTCTCGGC TTCGCCATGGCCTGGAACTTCTTCCTCAACATGGCCTTCCTAGTGCCCTTCGAAATTGTAGCCATGAACATTATG ATCACCTTCTGGACTGACAAAGTCCCCGTTGAGGCCATAATTGTCGCCATGATCGTTCTATATGCTATCCTCAAC GTGGCCACCGTGCGCTACTTCGGCATCTCCGAGTTCTACCTGTCCATCTTCAAGGTGATTCTGATGTTGGGGCTG TTCTTCTTCACCTTCATCACTATGCTGGGCGGCAACCCCCTGCATGACCGCTACGGCTTCCGGTATTGGAATCAC CCGGGCGCCTTTGTCGAACACATCGTGTCCGGAGGGACGGGCAAATTCCTGGGCGTCCTATCCTGCGTGTATCAA GCCAGCTTTTCAATCTGCGGTCCAGAGTACATCTCTATGGTGGCTGCTGAGACTGAGAACCCCCGCAAGATCCTG CCCCCTGCCTACCGGTCCTTCGTCTGGCGCATTCTTCTCTTCTTCGTGGGATCTGCCCTTTGTATGGGTATCGTC ATCCCGTACAACGATACCACCCTCATGGGTATTCTCGGTGGTTCACTCACTGGATCAGGTACTGGCGCTGCATCG CCCTACGTCATCGCAATGCAGCGGCTCAAGATCAACGGACTGCCCTCCCTCGTCAACGCGCTTATCATGACGTCC ATCTTCAGCGCTGGAAACGGCCTCCTCTTCTCGGCAACCCGCACCCTGCACGGCATGTCTCTCGAAGGCCACGCC CCGCGCTTTTTCTCGTGGTGTACCAAGGCCGGTGTCCCACTCTGGGCCCTGCTCTTCTCGCTCAGCTTCTGCCTG CTCGCCTTCCTGCAGGTCAGCAGCTCGTCGGCCAATGTCATGAACTACCTCGTCGACCTCGTCACCTGCTGCCAA CTTATCAACTACCTCTGCACGGCCGCAACCTACAGGCACTTCTTCTCGTCTCTCAAGCGCCAGGGTATCTCCCGC GACACCCTGCCCTACAAGGGCCGCTTCCAGCCGTACACGTCCTACTTCGCCATGGGCGGCACGCTCTTCATGCTG CTGGCCGGCGGCTACGACGTTTTCATCAAGGGCGGTTGGGACGTCATGTGGTTCTGCCTTGACTACGCCATGATC GGCTTCTTCATTGTGCTATTCCTCTTCTGGAAGATCGTCTTCCGCAGCCGCTACGTGTGGCCGGGCACCGCGGAC CTGAGCCTCGGCGGGATAAAGGAGGAGATCGACCAATACGAGGCTGCACTCATCCCGCGCGAGCAGGGCTTGGTG GATAAGGTGGTCGGGAAGATTTTCGAATGA |
| Transcript | >Pro_DTO377G3_2|g2345.t1 ATGTCAGCCTCCAAGTATTTTGAGAAGGGCCCTCCTTCACCATCCATCGCCACGGAGCCTTCGTCCAAGATCGAC GATGATGTTCAGCCGGGCATGTCTGCGAACATATCCTCAGGGTCGCAGCATCTGCACCGCAAGCTGCGAGGATCG GAAGTCCAGCTTTTCGCTATTGGAGGAGCCATTGGTACCTCTCTCTATGTGCAAATGGGCCAGGCTCTCCCCAAG GGTGGCCCCGCAGGTCTCTTCATCGCCTTCTTCATCTGGGGCGCCGTCATGTGGGCCGTCAACGAGTGCTTCGCC GAGATGGTGACTTACCTACCCGTGCCCTCGCCCTTCATCCGCTTTGGCAGCGAATGGGTTGATGGCGCTCTCGGC TTCGCCATGGCCTGGAACTTCTTCCTCAACATGGCCTTCCTAGTGCCCTTCGAAATTGTAGCCATGAACATTATG ATCACCTTCTGGACTGACAAAGTCCCCGTTGAGGCCATAATTGTCGCCATGATCGTTCTATATGCTATCCTCAAC GTGGCCACCGTGCGCTACTTCGGCATCTCCGAGTTCTACCTGTCCATCTTCAAGGTGATTCTGATGTTGGGGCTG TTCTTCTTCACCTTCATCACTATGCTGGGCGGCAACCCCCTGCATGACCGCTACGGCTTCCGGTATTGGAATCAC CCGGGCGCCTTTGTCGAACACATCGTGTCCGGAGGGACGGGCAAATTCCTGGGCGTCCTATCCTGCGTGTATCAA GCCAGCTTTTCAATCTGCGGTCCAGAGTACATCTCTATGGTGGCTGCTGAGACTGAGAACCCCCGCAAGATCCTG CCCCCTGCCTACCGGTCCTTCGTCTGGCGCATTCTTCTCTTCTTCGTGGGATCTGCCCTTTGTATGGGTATCGTC ATCCCGTACAACGATACCACCCTCATGGGTATTCTCGGTGGTTCACTCACTGGATCAGGTACTGGCGCTGCATCG CCCTACGTCATCGCAATGCAGCGGCTCAAGATCAACGGACTGCCCTCCCTCGTCAACGCGCTTATCATGACGTCC ATCTTCAGCGCTGGAAACGGCCTCCTCTTCTCGGCAACCCGCACCCTGCACGGCATGTCTCTCGAAGGCCACGCC CCGCGCTTTTTCTCGTGGTGTACCAAGGCCGGTGTCCCACTCTGGGCCCTGCTCTTCTCGCTCAGCTTCTGCCTG CTCGCCTTCCTGCAGGTCAGCAGCTCGTCGGCCAATGTCATGAACTACCTCGTCGACCTCGTCACCTGCTGCCAA CTTATCAACTACCTCTGCACGGCCGCAACCTACAGGCACTTCTTCTCGTCTCTCAAGCGCCAGGGTATCTCCCGC GACACCCTGCCCTACAAGGGCCGCTTCCAGCCGTACACGTCCTACTTCGCCATGGGCGGCACGCTCTTCATGCTG CTGGCCGGCGGCTACGACGTTTTCATCAAGGGCGGTTGGGACGTCATGTGGTTCTGCCTTGACTACGCCATGATC GGCTTCTTCATTGTGCTATTCCTCTTCTGGAAGATCGTCTTCCGCAGCCGCTACGTGTGGCCGGGCACCGCGGAC CTGAGCCTCGGCGGGATAAAGGAGGAGATCGACCAATACGAGGCTGCACTCATCCCGCGCGAGCAGGGCTTGGTG GATAAGGTGGTCGGGAAGATTTTCGAATGA |
| Gene | >Pro_DTO377G3_2|g2345.t1 ATGTCAGCCTCCAAGTATTTTGAGAAGGGCCCTCCTTCACCATCCATCGCCACGGAGCCTTCGTCCAAGATCGAC GATGATGTTCAGCCGGGCATGTCTGCGAACATATCCTCAGGGTCGCAGCATCTGCACCGCAAGCTGCGAGGATCG GAAGTCCAGCTTTTCGCTATTGGAGGAGCCATTGGTACCTGTAAGTCGACAAGAACTTCTGCTTCACAACGGTAG CACGGAAGGCTGACAACCTTGAAGCTCTCTATGTGCAAATGGGCCAGGCTCTCCCCAAGGGTGGCCCCGCAGGTC TCTTCATCGCCTTCTTCATCTGGGGCGCCGTCATGTGGGCCGTCAACGAGTGCTTCGCCGAGATGGTGACTTACC TACCCGTGCCCTCGCCCTTCATCCGCTTTGGCAGCGAATGGGTTGATGGCGCTCTCGGCTTCGCCATGGCCTGGA ACTTCTTCCTCAACATGGCCTTCCTAGTGCCCTTCGAAATTGTAGCCATGAACATTATGATCACCTTCTGGACTG ACAAAGTCCCCGTTGAGGCCATAATTGTCGCCATGATCGTTCTATATGCTATCCTCAACGTGGCCACCGTGCGCT ACTTCGGCATCTCCGAGTTCTACCTGTCCATCTTCAAGGTGATTCTGATGTTGGGGCTGTTCTTCTTCACCTTCA TCACTATGCTGGGCGGCAACCCCCTGCATGACCGCTACGGCTTCCGGTATTGGAATCACCCGGGCGCCTTTGTCG AACACATCGTGTCCGGAGGGACGGGCAAATTCCTGGGCGTCCTATCCTGCGTGTATCAAGCCAGCTTTTCGTAAG TGTTGCCACCTACAGCCGCGCCCCCAACTCCTCTTAGTATGACTTTGTGCGTTGGGACCTGACCGTTTTCAAAAA CAGAATCTGCGGTCCAGAGTACATCTCTATGGTGGCTGCTGAGACTGAGAACCCCCGCAAGATCCTGCCCCCTGC CTACCGGTCCTTCGTCTGGCGCATTCTTCTCTTCTTCGTGGGATCTGCCCTTTGTATGGGTATCGTCATCCCGTA CAACGATACCACCCTCATGGGTATTCTCGGTGGTTCACTCACTGGATCAGGTACTGGCGCTGCATCGTAAGTCTT CTCAACAGCGTTTGTTCATTCCCCATAATCACTTATCCTAACAATGTTTTTTGCACAGGCCCTACGTCATCGCAA TGCAGCGGCTCAAGATCAACGGACTGCCCTCCCTCGTCAACGCGCTTATCATGACGTCCATCTTCAGCGCTGGAA ACGGCCTCCTCTTCTCGGCAACCCGCACCCTGCACGGCATGTCTCTCGAAGGCCACGCCCCGCGCTTTTTCTCGT GGTGTACCAAGGCCGGTGTCCCACTCTGGGCCCTGCTCTTCTCGCTCAGCTTCTGCCTGCTCGCCTTCCTGCAGG TCAGCAGCTCGTCGGCCAATGTCATGAACTACCTCGTCGACCTCGTCACCTGCTGCCAACTTATCAACTACCTCT GCACGGCCGCAACCTACAGGCACTTCTTCTCGTCTCTCAAGCGCCAGGGTATCTCCCGCGACACCCTGCCCTACA AGGGCCGCTTCCAGCCGTACACGTCCTACTTCGCCATGGGCGGCACGCTCTTCATGCTGCTGGCCGGCGGCTACG ACGTTTTCATCAAGGGCGGTTGGGACGTCATGTGGTTCTGCCTTGACTACGCCATGATCGGCTTCTTCATTGTGC TATTCCTCTTCTGGAAGATCGTCTTCCGCAGCCGCTACGTGTGGCCGGGCACCGCGGACCTGAGCCTCGGCGGGA TAAAGGAGGAGATCGACCAATACGAGGCTGCACTCATCCCGCGCGAGCAGGGCTTGGTGGATAAGGTGGTCGGGA AGATTTTCGAATGA |