Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2310.t1
Gene name
Locationscaffold_02:2230528..2232329
Strand-
Gene length (bp)1801
Transcript length (bp)1623
Coding sequence length (bp)1623
Protein length (aa) 541

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08790 zf-LYAR LYAR-type C2HC zinc finger 2.7E-14 30 57

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 59 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2310.t1
MVSFSCEACGDVLTKKKLDPHRGQCRGASFTCIDCMVHFYGLEYRAHTSCMTEAQKYQGALYKEKPQKGKKGQNN
KQNPNQNPNGRHQQPRVDDGSDGEALKNAPPPPAPTPPPVGDVRAPAPPPANNDKAVNVFDYLVADETPNASKVT
LAAPKEQMKMNPNAKSLFEPSQSLTRVETNPNTDDEGKNYDIAFEENGFSYGAGNIPHSASPPNASTEFVTPAPK
KKKDRRREEKAPGTVSEKKRKRGQAEVLSTPGEAVDTSMMDAPSSIINNAGTPMLNHSGLTGGLNRMMRSPSADG
DDSPETSRRAYQDTSSPIKRSRRNGKEANGNGDPGLGISMKNRAGRLVSSMFGGSAVSSTNGSNTDSAPKALVHA
RRGSFSSGDGQLEVRKNKKSHRARADDYDDSRKSKRKSSNPTDGDRPSRRLKQVDERRVSIDSSNGHQVAVYRQS
RPPARSDEDLQRDLAYHFLSLVPKDSQRGCSLNKALKRFHRELSEEYDADHGHDNGRGWVDRDRRADDEKDLFRA
LRLRRNDRGEIVVFI*
Coding >Pro_DTO377G3_2|g2310.t1
ATGGTCTCCTTCTCTTGCGAGGCATGTGGTGATGTTCTCACTAAGAAAAAGCTCGATCCTCATCGCGGCCAATGT
CGCGGCGCTTCCTTCACCTGTATCGATTGTATGGTGCATTTCTACGGATTGGAATATAGAGCTCATACGTCATGC
ATGACCGAGGCGCAAAAGTATCAGGGTGCTCTATATAAAGAGAAGCCCCAGAAAGGAAAGAAAGGACAAAACAAC
AAGCAGAATCCCAACCAGAATCCCAACGGCCGTCACCAGCAACCCCGTGTGGACGACGGTTCAGACGGCGAGGCC
CTGAAGAACGCTCCTCCTCCCCCTGCTCCCACTCCCCCTCCTGTCGGTGATGTGAGGGCCCCTGCTCCTCCCCCG
GCCAACAATGACAAGGCCGTCAATGTGTTCGATTACCTCGTCGCCGATGAGACTCCGAACGCATCCAAGGTCACC
CTTGCCGCACCCAAGGAACAGATGAAGATGAACCCCAATGCCAAATCGCTCTTCGAGCCCAGCCAGTCCCTTACT
CGCGTCGAAACAAACCCCAACACGGATGACGAGGGTAAAAATTACGATATCGCATTCGAGGAGAATGGCTTTTCA
TACGGTGCCGGCAACATCCCGCACTCAGCATCGCCCCCGAATGCGTCAACAGAGTTCGTCACGCCCGCACCTAAG
AAGAAGAAGGACCGCCGTCGCGAGGAGAAAGCCCCCGGCACTGTCAGCGAGAAGAAGCGCAAGCGCGGTCAAGCA
GAGGTTCTCAGCACCCCGGGTGAAGCAGTCGACACCTCAATGATGGATGCTCCGTCCAGCATCATCAACAATGCC
GGCACACCCATGCTGAACCATTCCGGCCTGACCGGCGGCCTGAATCGGATGATGCGCTCCCCATCCGCCGACGGC
GACGACAGCCCCGAAACCAGCCGCCGTGCCTACCAAGATACCTCGTCCCCGATCAAGCGCAGCCGCCGCAACGGC
AAAGAAGCCAACGGCAACGGTGATCCAGGTCTCGGCATCTCAATGAAGAACCGCGCTGGCCGCCTCGTCTCCTCC
ATGTTCGGCGGTTCAGCTGTCTCGAGCACCAACGGCTCCAACACAGATTCCGCCCCCAAAGCTCTTGTCCACGCC
CGCCGCGGTAGTTTCTCCAGCGGCGACGGCCAGCTCGAGGTCCGCAAGAACAAGAAATCGCACCGCGCGCGCGCA
GACGACTACGATGACTCCCGTAAATCTAAGCGCAAGAGCTCAAACCCCACCGATGGCGACAGACCCTCCCGCCGT
CTTAAGCAAGTCGACGAGCGCCGTGTCTCCATTGACTCCTCGAACGGCCACCAAGTGGCTGTCTACAGGCAGTCG
CGGCCGCCGGCGCGCTCGGACGAGGACCTGCAGCGCGATCTGGCCTATCACTTCCTCTCGCTGGTCCCAAAGGAT
AGCCAGCGTGGCTGCTCCCTTAACAAGGCGCTTAAGCGCTTCCACCGTGAGCTCTCGGAGGAGTATGATGCTGAT
CATGGTCATGATAATGGGCGCGGCTGGGTGGACCGGGATCGCAGGGCTGATGATGAGAAGGATCTTTTCCGCGCG
TTACGGCTAAGACGTAACGATCGTGGTGAGATTGTTGTGTTCATTTAG
Transcript >Pro_DTO377G3_2|g2310.t1
ATGGTCTCCTTCTCTTGCGAGGCATGTGGTGATGTTCTCACTAAGAAAAAGCTCGATCCTCATCGCGGCCAATGT
CGCGGCGCTTCCTTCACCTGTATCGATTGTATGGTGCATTTCTACGGATTGGAATATAGAGCTCATACGTCATGC
ATGACCGAGGCGCAAAAGTATCAGGGTGCTCTATATAAAGAGAAGCCCCAGAAAGGAAAGAAAGGACAAAACAAC
AAGCAGAATCCCAACCAGAATCCCAACGGCCGTCACCAGCAACCCCGTGTGGACGACGGTTCAGACGGCGAGGCC
CTGAAGAACGCTCCTCCTCCCCCTGCTCCCACTCCCCCTCCTGTCGGTGATGTGAGGGCCCCTGCTCCTCCCCCG
GCCAACAATGACAAGGCCGTCAATGTGTTCGATTACCTCGTCGCCGATGAGACTCCGAACGCATCCAAGGTCACC
CTTGCCGCACCCAAGGAACAGATGAAGATGAACCCCAATGCCAAATCGCTCTTCGAGCCCAGCCAGTCCCTTACT
CGCGTCGAAACAAACCCCAACACGGATGACGAGGGTAAAAATTACGATATCGCATTCGAGGAGAATGGCTTTTCA
TACGGTGCCGGCAACATCCCGCACTCAGCATCGCCCCCGAATGCGTCAACAGAGTTCGTCACGCCCGCACCTAAG
AAGAAGAAGGACCGCCGTCGCGAGGAGAAAGCCCCCGGCACTGTCAGCGAGAAGAAGCGCAAGCGCGGTCAAGCA
GAGGTTCTCAGCACCCCGGGTGAAGCAGTCGACACCTCAATGATGGATGCTCCGTCCAGCATCATCAACAATGCC
GGCACACCCATGCTGAACCATTCCGGCCTGACCGGCGGCCTGAATCGGATGATGCGCTCCCCATCCGCCGACGGC
GACGACAGCCCCGAAACCAGCCGCCGTGCCTACCAAGATACCTCGTCCCCGATCAAGCGCAGCCGCCGCAACGGC
AAAGAAGCCAACGGCAACGGTGATCCAGGTCTCGGCATCTCAATGAAGAACCGCGCTGGCCGCCTCGTCTCCTCC
ATGTTCGGCGGTTCAGCTGTCTCGAGCACCAACGGCTCCAACACAGATTCCGCCCCCAAAGCTCTTGTCCACGCC
CGCCGCGGTAGTTTCTCCAGCGGCGACGGCCAGCTCGAGGTCCGCAAGAACAAGAAATCGCACCGCGCGCGCGCA
GACGACTACGATGACTCCCGTAAATCTAAGCGCAAGAGCTCAAACCCCACCGATGGCGACAGACCCTCCCGCCGT
CTTAAGCAAGTCGACGAGCGCCGTGTCTCCATTGACTCCTCGAACGGCCACCAAGTGGCTGTCTACAGGCAGTCG
CGGCCGCCGGCGCGCTCGGACGAGGACCTGCAGCGCGATCTGGCCTATCACTTCCTCTCGCTGGTCCCAAAGGAT
AGCCAGCGTGGCTGCTCCCTTAACAAGGCGCTTAAGCGCTTCCACCGTGAGCTCTCGGAGGAGTATGATGCTGAT
CATGGTCATGATAATGGGCGCGGCTGGGTGGACCGGGATCGCAGGGCTGATGATGAGAAGGATCTTTTCCGCGCG
TTACGGCTAAGACGTAACGATCGTGGTGAGATTGTTGTGTTCATTTAG
Gene >Pro_DTO377G3_2|g2310.t1
ATGGTCTCCTTCTCTTGCGAGGTAAGTCCTATATGATGTCTGAGGCGTGTGCCGCGCTCGAACCGCTGCTAACAA
TCACTGTGGTAGGCATGTGGTGATGTTCTCACTAAGAAAAAGCTCGATCCTCATCGCGGCCAATGTCGCGGCGCT
TCCTTCACCTGTATCGATTGTATGGTGCATTTCTACGGATTGGAATATAGAGCTCATACGGTACGTCGGATCCGC
GTCGCATTTTCGCATAATGGTCGTGGGGCTACTCCACTAGGGTCCTAATTATTGAATCAACAAGGGAGTCATCCG
CTAACGAGACCGGCCACCACAGTCATGCATGACCGAGGCGCAAAAGTATCAGGGTGCTCTATATAAAGAGAAGCC
CCAGAAAGGAAAGAAAGGACAAAACAACAAGCAGAATCCCAACCAGAATCCCAACGGCCGTCACCAGCAACCCCG
TGTGGACGACGGTTCAGACGGCGAGGCCCTGAAGAACGCTCCTCCTCCCCCTGCTCCCACTCCCCCTCCTGTCGG
TGATGTGAGGGCCCCTGCTCCTCCCCCGGCCAACAATGACAAGGCCGTCAATGTGTTCGATTACCTCGTCGCCGA
TGAGACTCCGAACGCATCCAAGGTCACCCTTGCCGCACCCAAGGAACAGATGAAGATGAACCCCAATGCCAAATC
GCTCTTCGAGCCCAGCCAGTCCCTTACTCGCGTCGAAACAAACCCCAACACGGATGACGAGGGTAAAAATTACGA
TATCGCATTCGAGGAGAATGGCTTTTCATACGGTGCCGGCAACATCCCGCACTCAGCATCGCCCCCGAATGCGTC
AACAGAGTTCGTCACGCCCGCACCTAAGAAGAAGAAGGACCGCCGTCGCGAGGAGAAAGCCCCCGGCACTGTCAG
CGAGAAGAAGCGCAAGCGCGGTCAAGCAGAGGTTCTCAGCACCCCGGGTGAAGCAGTCGACACCTCAATGATGGA
TGCTCCGTCCAGCATCATCAACAATGCCGGCACACCCATGCTGAACCATTCCGGCCTGACCGGCGGCCTGAATCG
GATGATGCGCTCCCCATCCGCCGACGGCGACGACAGCCCCGAAACCAGCCGCCGTGCCTACCAAGATACCTCGTC
CCCGATCAAGCGCAGCCGCCGCAACGGCAAAGAAGCCAACGGCAACGGTGATCCAGGTCTCGGCATCTCAATGAA
GAACCGCGCTGGCCGCCTCGTCTCCTCCATGTTCGGCGGTTCAGCTGTCTCGAGCACCAACGGCTCCAACACAGA
TTCCGCCCCCAAAGCTCTTGTCCACGCCCGCCGCGGTAGTTTCTCCAGCGGCGACGGCCAGCTCGAGGTCCGCAA
GAACAAGAAATCGCACCGCGCGCGCGCAGACGACTACGATGACTCCCGTAAATCTAAGCGCAAGAGCTCAAACCC
CACCGATGGCGACAGACCCTCCCGCCGTCTTAAGCAAGTCGACGAGCGCCGTGTCTCCATTGACTCCTCGAACGG
CCACCAAGTGGCTGTCTACAGGCAGTCGCGGCCGCCGGCGCGCTCGGACGAGGACCTGCAGCGCGATCTGGCCTA
TCACTTCCTCTCGCTGGTCCCAAAGGATAGCCAGCGTGGCTGCTCCCTTAACAAGGCGCTTAAGCGCTTCCACCG
TGAGCTCTCGGAGGAGTATGATGCTGATCATGGTCATGATAATGGGCGCGGCTGGGTGGACCGGGATCGCAGGGC
TGATGATGAGAAGGATCTTTTCCGCGCGTTACGGCTAAGACGTAACGATCGTGGTGAGATTGTTGTGTTCATTTA
G

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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