Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g2276.t1
Gene name
Location	scaffold_02:2117747..2120605
Strand	-
Gene length (bp)	2858
Transcript length (bp)	2622
Coding sequence length (bp)	2622
Protein length (aa)	874

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00888	Cullin	Cullin family	9.3E-183	146	773
PF10557	Cullin_Nedd8	Cullin protein neddylation domain	1.3E-23	804	865

GO

GO Term	Description	Terminal node
GO:0031625	ubiquitin protein ligase binding	Yes
GO:0006511	ubiquitin-dependent protein catabolic process	Yes
GO:0044248	cellular catabolic process	No
GO:0043170	macromolecule metabolic process	No
GO:0019538	protein metabolic process	No
GO:0008150	biological_process	No
GO:0044389	ubiquitin-like protein ligase binding	No
GO:0019899	enzyme binding	No
GO:0071704	organic substance metabolic process	No
GO:0044260	cellular macromolecule metabolic process	No
GO:0008152	metabolic process	No
GO:0009057	macromolecule catabolic process	No
GO:0005488	binding	No
GO:0009056	catabolic process	No
GO:0005515	protein binding	No
GO:0044265	cellular macromolecule catabolic process	No
GO:0003674	molecular_function	No
GO:0043632	modification-dependent macromolecule catabolic process	No
GO:0006807	nitrogen compound metabolic process	No
GO:0019941	modification-dependent protein catabolic process	No
GO:0006508	proteolysis	No
GO:1901575	organic substance catabolic process	No
GO:0044237	cellular metabolic process	No
GO:1901564	organonitrogen compound metabolic process	No
GO:0009987	cellular process	No
GO:0051603	proteolysis involved in protein catabolic process	No
GO:0044238	primary metabolic process	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 46	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
3d_25C	Three days - 25 degrees Celsius	75.12	45.94	104.31
5d_25C	Five days - 25 degrees Celsius	91.16	55.03	127.30
7d_25C	Seven days - 25 degrees Celsius	96.29	58.07	134.50
10d_25C	Ten days - 25 degrees Celsius	117.38	69.83	164.93
7d_15C	Seven days - 15 degrees Celsius	105.83	62.57	149.10
7d_30C	Seven days - 30 degrees Celsius	85.14	50.58	119.71

Differential expression

Label1	Label2	Q-value	Significant difference
3d_25C	5d_25C	0.439652	no
3d_25C	7d_25C	0.293447	no
3d_25C	7d_15C	0.120353	no
3d_25C	7d_30C	0.662414	no
3d_25C	10d_25C	0.034793	yes
5d_25C	7d_25C	0.868722	no
5d_25C	7d_15C	0.581545	no
5d_25C	7d_30C	0.834711	no
5d_25C	10d_25C	0.291547	no
7d_25C	7d_15C	0.750571	no
7d_25C	7d_30C	0.669609	no
7d_25C	10d_25C	0.437795	no
7d_15C	7d_30C	0.384667	no
7d_15C	10d_25C	0.729752	no
7d_30C	10d_25C	0.161860	no

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g2276.t1 MPQNSRGDTEQSGKRQSIGKRKLSDQGEPSQPRSQQSISELLSQRYSPDRSLDLQTHKRSRLSSSPSRSSTQTSP HKMHPISGSPPKNGVPGRGVSGLNGPIRSHGLNTNIRQNTFSPHSGAKKLVVKNLRTGPRLNQESYFDKVWSQLD AALTAIFDDRKPESSLEELYKGGENVCRQERAALLAKKLQDRCKEFVSGKMRTNLVARAGGSTDVGTLRIVIEAW SAWHSKLVTIRWIFYYLDQSFLLHSKEQPVIREMGLIQFRSYIFSDASLKPKIVKGAYDLIEADRGGFTKALTDS SLLRDAIELFHSLDVYGSDFEPLFMAKSEEFVKQWSQQQAAGSLAAYVDNSHQLIEREVERCGLFSFNRSTKLKL SNLLDETLVTRRTDVLTNENEVLGLMRAGNKTALKQLYGLLDRRDLSLELKPAFRKYIIEEGEGIVFNQDLEADM VIHLLQFKQKVDDICTDSFESNEELGHTVRDAFGTFMNHGKKMDSTGGTDNPKSGEMIAKYVDRLLKGGYKLPPG RNPEEVSLMSDDAELDRQLDQVLDLFRFVHGKAVFEAFYKNDLARRLLMKRSASNDAEKSMLTRLKNECGSNFTH NLESMFNDMDTANDEMTAFRRSQQDERRSRFEFEVSVLSAASWPTYPDVPVRIPSTIARSISRFETFYHNKHTGR KLTWKHQLAHCQLTANFPLGKKNLVVSSFQAIVLLLFNDIPNGESMQYPQIQEATGLSDPELKRTLQSLACAKYR VLSKDPKGKEVNSSDKFSYNANFSDKQMRIKINQIQLKETKEETKTTHERVAADRHFETQAAIVRIMKGRKTLSH AELIAEVISATKTRGVLQPADIKGEIEKLIEKEYLERKEGTNQYSYVS*
Coding	>Pro_DTO377G3_2\|g2276.t1 ATGCCGCAGAACTCGAGAGGCGACACCGAGCAGAGCGGTAAGCGCCAATCAATCGGCAAGAGGAAGCTTTCTGAT CAAGGAGAGCCGTCGCAGCCGCGATCGCAACAATCCATATCCGAGCTCCTCTCCCAGAGGTATTCACCCGACCGC AGCCTTGATCTGCAAACCCACAAGCGTTCCCGTCTGTCGTCGTCTCCCTCACGCTCCTCAACCCAAACGAGCCCG CATAAGATGCATCCGATTTCCGGTTCCCCGCCTAAGAATGGCGTGCCAGGTCGGGGAGTCTCTGGGTTAAATGGT CCCATCAGATCCCATGGCTTGAATACTAATATCCGCCAAAACACATTTTCTCCTCATAGCGGCGCGAAAAAGCTC GTCGTCAAGAACCTTCGTACCGGACCGCGGCTTAACCAGGAATCGTATTTCGATAAAGTGTGGTCGCAGTTGGAT GCGGCTCTAACGGCTATTTTTGATGACAGGAAACCAGAGAGCTCGCTAGAAGAGCTATACAAGGGCGGGGAGAAT GTCTGCCGCCAGGAGCGGGCAGCTTTGTTGGCTAAGAAGCTTCAGGATCGGTGCAAAGAGTTCGTCAGCGGGAAA ATGCGCACGAATCTTGTCGCCAGAGCTGGAGGTAGCACTGATGTCGGTACATTGCGGATAGTGATTGAGGCGTGG TCGGCCTGGCACTCCAAGCTAGTTACTATTCGCTGGATCTTCTATTATCTCGACCAGTCGTTCCTCTTGCATTCT AAAGAACAACCGGTGATTCGTGAAATGGGATTGATTCAGTTCCGGTCATACATCTTCTCTGATGCGAGTCTGAAG CCAAAGATTGTGAAAGGAGCATATGATTTGATCGAGGCCGATCGAGGTGGATTTACAAAGGCATTGACAGATTCA AGTTTGCTTAGAGATGCTATTGAGCTTTTCCACAGCCTCGATGTGTATGGGAGTGACTTTGAGCCTTTATTCATG GCCAAGTCCGAGGAGTTTGTGAAGCAGTGGTCTCAACAACAAGCAGCAGGGTCCCTGGCTGCATACGTCGATAAT TCCCACCAGTTGATCGAACGTGAGGTAGAACGGTGTGGTCTCTTCTCTTTCAATCGAAGCACGAAGCTCAAACTG TCCAATCTCCTGGATGAGACTCTAGTGACACGGCGAACGGACGTGTTGACCAACGAAAACGAAGTGCTTGGCTTG ATGCGAGCCGGCAATAAGACTGCCTTGAAGCAACTATACGGTTTGCTTGACCGGCGAGATCTTAGTCTCGAATTG AAGCCTGCATTTAGGAAGTACATCATCGAGGAGGGTGAGGGCATCGTGTTTAATCAAGATCTGGAGGCCGACATG GTCATTCACCTGCTCCAATTTAAGCAAAAGGTTGACGATATTTGCACCGATTCTTTTGAGTCGAATGAGGAACTG GGCCACACGGTCCGCGACGCCTTTGGTACCTTTATGAACCACGGGAAGAAGATGGACTCTACAGGTGGTACCGAC AATCCCAAGTCGGGTGAAATGATCGCCAAATACGTGGATAGGCTCCTTAAGGGCGGTTACAAGCTGCCACCAGGC CGTAACCCAGAGGAAGTAAGCCTGATGTCCGATGATGCAGAGCTTGACCGACAGCTTGATCAAGTTCTCGACCTC TTCCGATTCGTACATGGAAAGGCTGTCTTTGAAGCCTTTTACAAGAACGATCTTGCCCGGCGTCTTTTGATGAAA CGAAGCGCGAGCAACGATGCGGAAAAGAGCATGTTAACTCGTTTGAAGAACGAATGCGGGTCAAATTTCACTCAT AACCTTGAGTCCATGTTCAACGATATGGACACTGCTAACGATGAAATGACGGCCTTCAGACGGTCACAGCAGGAC GAGCGCAGGAGCCGATTCGAATTCGAAGTTAGCGTGCTCTCTGCCGCCTCCTGGCCGACATATCCCGATGTACCC GTACGGATTCCATCGACGATCGCACGCTCCATTAGCAGATTCGAGACGTTCTACCACAACAAACATACAGGACGC AAGCTCACCTGGAAACATCAACTGGCGCATTGTCAGCTGACTGCAAACTTCCCGCTCGGAAAGAAGAACCTGGTA GTCAGCTCGTTCCAGGCGATTGTGTTGCTGCTCTTTAACGATATCCCCAATGGCGAGAGCATGCAGTACCCCCAG ATCCAAGAAGCGACCGGATTGTCGGACCCGGAATTGAAACGAACGCTCCAGTCTCTCGCATGCGCCAAGTACCGA GTCTTATCCAAGGACCCTAAGGGCAAAGAGGTGAACTCTAGCGATAAATTCTCGTACAACGCGAATTTCAGCGAC AAGCAAATGCGCATCAAGATCAACCAGATCCAGCTGAAGGAGACCAAAGAGGAAACCAAGACGACGCACGAGCGG GTTGCTGCCGACCGCCATTTCGAGACGCAAGCTGCCATCGTGCGCATTATGAAGGGCCGCAAGACCCTCAGCCAC GCCGAGCTGATCGCGGAGGTTATCAGTGCTACTAAGACCCGGGGTGTGCTTCAGCCGGCCGATATTAAGGGAGAG ATTGAGAAGTTGATCGAGAAGGAGTATCTCGAGCGCAAAGAAGGCACTAATCAATACAGCTACGTGTCATAA
Transcript	>Pro_DTO377G3_2\|g2276.t1 ATGCCGCAGAACTCGAGAGGCGACACCGAGCAGAGCGGTAAGCGCCAATCAATCGGCAAGAGGAAGCTTTCTGAT CAAGGAGAGCCGTCGCAGCCGCGATCGCAACAATCCATATCCGAGCTCCTCTCCCAGAGGTATTCACCCGACCGC AGCCTTGATCTGCAAACCCACAAGCGTTCCCGTCTGTCGTCGTCTCCCTCACGCTCCTCAACCCAAACGAGCCCG CATAAGATGCATCCGATTTCCGGTTCCCCGCCTAAGAATGGCGTGCCAGGTCGGGGAGTCTCTGGGTTAAATGGT CCCATCAGATCCCATGGCTTGAATACTAATATCCGCCAAAACACATTTTCTCCTCATAGCGGCGCGAAAAAGCTC GTCGTCAAGAACCTTCGTACCGGACCGCGGCTTAACCAGGAATCGTATTTCGATAAAGTGTGGTCGCAGTTGGAT GCGGCTCTAACGGCTATTTTTGATGACAGGAAACCAGAGAGCTCGCTAGAAGAGCTATACAAGGGCGGGGAGAAT GTCTGCCGCCAGGAGCGGGCAGCTTTGTTGGCTAAGAAGCTTCAGGATCGGTGCAAAGAGTTCGTCAGCGGGAAA ATGCGCACGAATCTTGTCGCCAGAGCTGGAGGTAGCACTGATGTCGGTACATTGCGGATAGTGATTGAGGCGTGG TCGGCCTGGCACTCCAAGCTAGTTACTATTCGCTGGATCTTCTATTATCTCGACCAGTCGTTCCTCTTGCATTCT AAAGAACAACCGGTGATTCGTGAAATGGGATTGATTCAGTTCCGGTCATACATCTTCTCTGATGCGAGTCTGAAG CCAAAGATTGTGAAAGGAGCATATGATTTGATCGAGGCCGATCGAGGTGGATTTACAAAGGCATTGACAGATTCA AGTTTGCTTAGAGATGCTATTGAGCTTTTCCACAGCCTCGATGTGTATGGGAGTGACTTTGAGCCTTTATTCATG GCCAAGTCCGAGGAGTTTGTGAAGCAGTGGTCTCAACAACAAGCAGCAGGGTCCCTGGCTGCATACGTCGATAAT TCCCACCAGTTGATCGAACGTGAGGTAGAACGGTGTGGTCTCTTCTCTTTCAATCGAAGCACGAAGCTCAAACTG TCCAATCTCCTGGATGAGACTCTAGTGACACGGCGAACGGACGTGTTGACCAACGAAAACGAAGTGCTTGGCTTG ATGCGAGCCGGCAATAAGACTGCCTTGAAGCAACTATACGGTTTGCTTGACCGGCGAGATCTTAGTCTCGAATTG AAGCCTGCATTTAGGAAGTACATCATCGAGGAGGGTGAGGGCATCGTGTTTAATCAAGATCTGGAGGCCGACATG GTCATTCACCTGCTCCAATTTAAGCAAAAGGTTGACGATATTTGCACCGATTCTTTTGAGTCGAATGAGGAACTG GGCCACACGGTCCGCGACGCCTTTGGTACCTTTATGAACCACGGGAAGAAGATGGACTCTACAGGTGGTACCGAC AATCCCAAGTCGGGTGAAATGATCGCCAAATACGTGGATAGGCTCCTTAAGGGCGGTTACAAGCTGCCACCAGGC CGTAACCCAGAGGAAGTAAGCCTGATGTCCGATGATGCAGAGCTTGACCGACAGCTTGATCAAGTTCTCGACCTC TTCCGATTCGTACATGGAAAGGCTGTCTTTGAAGCCTTTTACAAGAACGATCTTGCCCGGCGTCTTTTGATGAAA CGAAGCGCGAGCAACGATGCGGAAAAGAGCATGTTAACTCGTTTGAAGAACGAATGCGGGTCAAATTTCACTCAT AACCTTGAGTCCATGTTCAACGATATGGACACTGCTAACGATGAAATGACGGCCTTCAGACGGTCACAGCAGGAC GAGCGCAGGAGCCGATTCGAATTCGAAGTTAGCGTGCTCTCTGCCGCCTCCTGGCCGACATATCCCGATGTACCC GTACGGATTCCATCGACGATCGCACGCTCCATTAGCAGATTCGAGACGTTCTACCACAACAAACATACAGGACGC AAGCTCACCTGGAAACATCAACTGGCGCATTGTCAGCTGACTGCAAACTTCCCGCTCGGAAAGAAGAACCTGGTA GTCAGCTCGTTCCAGGCGATTGTGTTGCTGCTCTTTAACGATATCCCCAATGGCGAGAGCATGCAGTACCCCCAG ATCCAAGAAGCGACCGGATTGTCGGACCCGGAATTGAAACGAACGCTCCAGTCTCTCGCATGCGCCAAGTACCGA GTCTTATCCAAGGACCCTAAGGGCAAAGAGGTGAACTCTAGCGATAAATTCTCGTACAACGCGAATTTCAGCGAC AAGCAAATGCGCATCAAGATCAACCAGATCCAGCTGAAGGAGACCAAAGAGGAAACCAAGACGACGCACGAGCGG GTTGCTGCCGACCGCCATTTCGAGACGCAAGCTGCCATCGTGCGCATTATGAAGGGCCGCAAGACCCTCAGCCAC GCCGAGCTGATCGCGGAGGTTATCAGTGCTACTAAGACCCGGGGTGTGCTTCAGCCGGCCGATATTAAGGGAGAG ATTGAGAAGTTGATCGAGAAGGAGTATCTCGAGCGCAAAGAAGGCACTAATCAATACAGCTACGTGTCATAA
Gene	>Pro_DTO377G3_2\|g2276.t1 ATGCCGCAGAACTCGAGAGGCGACACCGAGCAGAGCGGTAAGCGCCAATCAATCGGCAAGAGGAAGCTTTCTGAT CAAGGAGAGCCGTCGCAGCCGCGATCGCAACAATCCATATCCGAGCTCCTCTCCCAGAGGTATTCACCCGACCGC AGCCTTGATCTGCAAACCCACAAGCGTTCCCGTCTGTCGTCGTCTCCCTCACGCTCCTCAACCCAAACGAGCCCG CATAAGATGCATCCGATTTCCGGTTCCCCGCCTAAGAATGGCGTGCCAGGTCGGGGAGTCTCTGGGTTAAATGGT CCCATCAGATCCCATGGCTTGAATACTAATATCCGCCAAAACACATTTTCTCCTCATAGCGGCGCGAAAAAGCTC GTCGTCAAGAACCTTCGTACCGGACCGCGGCTTAACCAGGAATCGTATTTCGATAAAGTGTGGTCGCAGTTGGAT GCGGCTCTAACGGCTATTTTTGATGACAGGAAACCAGAGAGCTCGCTAGAAGAGCTATACAAGGGCGGGGAGAAT GTCTGCCGCCAGGAGCGGGCAGCTTTGTTGGCTAAGAAGCTTCAGGATCGGTGCAAAGAGTTCGTCAGCGGGAAA ATGCGCACGAATCTTGTCGCCAGAGCTGGAGGTAGCACTGATGTCGGTACATTGCGGATAGTGATTGAGGCGTGG TCGGCCTGGCACTCCAAGCTAGTATGTGTGGCAAGGAAATATCTCGAATGGAGGTTCACAGCTAACGGTCTCTCT CCCCCAGGTTACTATTCGCTGGATCTTCTATTATCTCGACCAGTCGTTCCTCTTGCATTCTAAAGAACAACCGGT GATTCGTGAAATGGGATTGATTCAGTTCCGGTCATACATCTTCTCTGATGCGAGTCTGAAGCCAAAGATTGTGAA AGGAGCATATGATTTGATCGAGGCCGATCGAGGTGGATTTACAAAGGCATTGACAGATTCAAGTTTGCTTAGAGA TGCTATTGAGCTTTTCCACAGCCTCGATGTGTATGGGAGTGACTTTGAGCCTTTATTCATGGCCAAGTCCGAGGA GTTTGTGAAGCAGTGGTCTCAACAACAAGCAGCAGGGTCCCTGGCTGCATACGTCGATAATTCCCACCAGTTGAT CGAACGTGAGGTAGAACGGTGTGGTCTCTTCTCTTTCAATCGAAGCACGAAGCTCAAACTGTCCAATCTCCTGGA TGAGACTCTAGTGACACGGCGAACGGACGTGTTGACCAACGAAAACGAAGTGCTTGGCTTGATGCGAGCCGGCAA TAAGACTGCCTTGAAGCAACTATACGGTTTGCTTGACCGGCGAGATCTTAGTCTCGAATTGAAGCCTGCATTTAG GAAGTACATCATCGAGGAGGGTGAGGGCATCGTGTTTAATCAAGATCTGGAGGCCGACATGGTCATTCACCTGCT CCAATTTAAGCAAAAGGTTGACGATATTTGCACCGATTCTTTTGAGTCGAATGAGGAACTGGGCCACACGGTCCG CGACGCCTTTGGTACCTTTATGAACCACGGGAAGAAGATGGACTCTACAGGTGGTACCGACAATCCCAAGTCGGG TGAAATGATCGCCAAATACGTGGATAGGCTCCTTAAGGGCGGTTACAAGCTGCCACCAGGCCGTAACCCAGAGGA AGTAAGCCTGATGTCCGATGATGCAGAGCTTGACCGACAGCTTGATCAAGTTCTCGACCTCTTCCGATTCGTACA TGGAAAGGCTGTCTTTGAAGCCTTTTACAAGAACGATCTTGCCCGGCGTCTTTTGATGAAACGAAGCGCGAGCAA CGATGCGGAAAAGAGCATGTTAACTCGTTTGAAGAACGGTTTGTCGCATCCAAGATCCATATGTTATGCGCTTTG GCTAATGTTTGGTTAGAATGCGGGTCAAATTTCACTCATAACCTTGAGTCCATGTTCAACGATATGGACACTGCT AACGATGAAATGACGGCCTTCAGACGGTCACAGCAGGACGAGCGCAGGAGCCGATTCGAATTCGAAGTTAGCGTG CTCTCTGCCGCCTCCTGGCCGACATATCCCGATGTACCCGTACGGATTCCATCGACGATCGCACGCTCCATTAGC AGATTCGAGACGTTCTACCACAACAAACATACAGGACGCAAGCTCACCTGGAAACATCAACTGGCGCATTGTCAG CTGACTGCAAACTTCCCGCTCGGAAAGAAGAACCTGGTAGTCAGCTCGTTCCAGGCGATTGTGTTGCTGCTCTTT AACGATATCCCCAATGGCGAGAGCATGCAGTACCCCCAGATCCAAGAAGCGACCGGATTGTGTAAGTGGATCCAC AGCGCTCTAAAAGTTGAACAATCCCTAACATGACACACAGCGGACCCGGAATTGAAACGAACGCTCCAGTCTCTC GCATGCGCCAAGTACCGAGTCTTATCCAAGGACCCTAAGGGCAAAGAGGTGAACTCTAGCGATAAATTCTCGTAC AACGCGAATTTCAGCGACAAGCAAATGCGCATCAAGATCAACCAGATCCAGCTGAAGGAGACCAAAGAGGAAACC AAGACGACGCACGAGCGGGTTGCTGCCGACCGCCATTTCGAGACGCAAGCTGCCATCGTGCGCATTATGAAGGGC CGCAAGACCCTCAGCCACGCCGAGCTGATCGCGGAGGTTATCAGTGCTACTAAGACCCGGGGTGTGCTTCAGCCG GCCGATATTAAGGGAGAGATTGAGAAGTGCGTATCCTCCTTACTAACAACCCGTTGTTCCCGGTTATTGTGTCTA ACATTGTTTTGACTTTTAGGTTGATCGAGAAGGAGTATCTCGAGCGCAAAGAAGGCACTAATCAATACAGCTACG TGTCATAA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences