Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2236.t1
Gene name
Locationscaffold_02:2013857..2015370
Strand+
Gene length (bp)1513
Transcript length (bp)1416
Coding sequence length (bp)1416
Protein length (aa) 472

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00743 FMO-like Flavin-binding monooxygenase-like 6.1E-23 77 243
PF00743 FMO-like Flavin-binding monooxygenase-like 1.5E-14 265 406
PF13738 Pyr_redox_3 Pyridine nucleotide-disulphide oxidoreductase 8.2E-08 163 299
PF13454 NAD_binding_9 FAD-NAD(P)-binding 1.3E-07 7 172
PF13434 Lys_Orn_oxgnase L-lysine 6-monooxygenase/L-ornithine 5-monooxygenase 2.5E-05 98 233
PF13450 NAD_binding_8 NAD(P)-binding Rossmann-like domain 9.6E-06 8 44

GO

GO Term Description Terminal node
GO:0004499 N,N-dimethylaniline monooxygenase activity Yes
GO:0050660 flavin adenine dinucleotide binding Yes
GO:0050661 NADP binding Yes
GO:0016709 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, NAD(P)H as one donor, and incorporation of one atom of oxygen No
GO:0003824 catalytic activity No
GO:0003674 molecular_function No
GO:0043168 anion binding No
GO:1901363 heterocyclic compound binding No
GO:0004497 monooxygenase activity No
GO:0000166 nucleotide binding No
GO:0036094 small molecule binding No
GO:0016705 oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen No
GO:0043167 ion binding No
GO:0005488 binding No
GO:0097159 organic cyclic compound binding No
GO:0016491 oxidoreductase activity No
GO:1901265 nucleoside phosphate binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 20 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
3d_25C Three days - 25 degrees Celsius 5.99 2.03 9.95
5d_25C Five days - 25 degrees Celsius 3.88 1.06 6.71
7d_25C Seven days - 25 degrees Celsius 3.92 0.87 6.97
10d_25C Ten days - 25 degrees Celsius 1.37 0.00 2.82
7d_15C Seven days - 15 degrees Celsius 4.02 0.92 7.13
7d_30C Seven days - 30 degrees Celsius 11.06 4.36 17.77

Differential expression

Label1 Label2 Q-value Significant difference
3d_25C 5d_25C 0.289651 no
3d_25C 7d_25C 0.325310 no
3d_25C 7d_15C 0.363027 no
3d_25C 7d_30C 0.071063 no
3d_25C 10d_25C 0.006742 yes
5d_25C 7d_25C 0.988807 no
5d_25C 7d_15C 0.958180 no
5d_25C 7d_30C 0.003197 yes
5d_25C 10d_25C 0.052372 no
7d_25C 7d_15C 0.970873 no
7d_25C 7d_30C 0.006742 yes
7d_25C 10d_25C 0.051079 no
7d_15C 7d_30C 0.007437 yes
7d_15C 10d_25C 0.046354 yes
7d_30C 10d_25C 0.000700 yes

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2236.t1
MEIDRVAVIGAGPCGLGVAKYLLAERKFKSITIFEQRDQPGGVWNYTGDEGISTSALARPNPSQEPQQPVKGTFA
SPVYDALETNIPKSLMQFTEYPFPAASALFPAHTVVRDYLHRYAEELLPYIRLNSLILDVTLSKKHPRPEWTVTW
RDLQTNEILVEQFDAVVVANGHHNDPYIPKITGLDEWSQTYPGSIIHSSSYRRPESFANKKVIVVGHSASGIDIA
NQIGRVSKHPLLISERTATNLSPQQAAVAQSLPEISLLSVEDGRVQFANGHEERDVDHIVFCTGYHFSIPFLSSL
QPSIVTDGVRPHHLYQHVFYSKEPTLALIGFPQRIVPFPFSQAQGAWVARVLAGRLSLPSEAEMERWIGDWVVTR
GEGRGFNTLAFPLDADYINSLYELSSHAARKDGLENDGRGKRPPFWGEKEKWTRERFPLIKQASQVLGSRRGEIK
ALEDLGFDFERDYVPDAEARL*
Coding >Pro_DTO377G3_2|g2236.t1
ATGGAAATCGACCGGGTAGCTGTTATCGGCGCAGGCCCCTGCGGCCTAGGAGTTGCAAAGTATCTTCTTGCTGAA
CGAAAATTCAAGTCTATCACAATATTCGAACAGCGCGACCAACCTGGCGGTGTTTGGAACTACACCGGCGATGAG
GGCATCAGCACATCGGCACTTGCCCGTCCCAACCCGAGTCAGGAGCCTCAACAGCCCGTGAAAGGAACTTTTGCT
TCCCCTGTATACGACGCACTTGAAACAAACATCCCTAAATCGTTGATGCAGTTTACCGAGTATCCGTTCCCCGCG
GCCAGTGCGCTATTCCCAGCCCATACCGTTGTGCGAGACTATCTTCATCGGTATGCAGAGGAATTACTGCCATAC
ATACGTCTGAACTCTTTGATTTTGGATGTCACACTGTCAAAAAAGCATCCAAGGCCCGAGTGGACTGTAACCTGG
CGTGATCTGCAAACTAATGAGATTTTGGTCGAGCAATTCGATGCAGTGGTTGTCGCCAATGGTCACCATAATGAC
CCATATATCCCCAAAATCACAGGCTTAGATGAGTGGAGTCAAACCTATCCAGGCTCCATCATCCATTCATCTTCT
TATAGGCGTCCCGAATCATTTGCAAACAAGAAAGTGATTGTCGTCGGACACTCTGCCTCTGGTATTGACATCGCG
AACCAAATCGGCCGTGTATCAAAACACCCGCTGCTGATTTCGGAACGCACGGCAACAAATCTCTCTCCACAACAA
GCCGCCGTTGCCCAAAGCCTTCCTGAAATCAGTCTCCTCAGTGTCGAAGATGGCCGTGTGCAATTTGCCAATGGC
CATGAAGAGCGAGATGTTGATCACATCGTCTTTTGCACGGGCTACCACTTCTCTATTCCATTTTTGTCAAGTCTC
CAGCCATCTATCGTTACAGATGGCGTGCGTCCGCATCATTTGTACCAGCATGTGTTTTACAGCAAAGAGCCCACC
CTCGCTTTAATCGGGTTTCCCCAGCGGATTGTTCCATTCCCCTTCAGTCAGGCGCAAGGGGCATGGGTCGCGCGC
GTCCTGGCAGGACGACTCTCGCTGCCTTCCGAGGCTGAAATGGAGCGGTGGATTGGCGACTGGGTAGTAACTCGC
GGCGAGGGACGCGGCTTCAACACCCTTGCCTTTCCGCTCGATGCAGACTACATCAATTCGCTGTACGAGTTGAGC
TCGCATGCAGCTCGGAAGGATGGGTTGGAGAATGATGGGCGTGGTAAAAGGCCGCCCTTCTGGGGTGAAAAAGAG
AAGTGGACGCGTGAGAGATTCCCGTTGATCAAACAGGCGTCGCAGGTGCTTGGTAGTCGACGGGGTGAGATAAAG
GCTTTGGAAGACCTTGGCTTTGACTTCGAGAGGGATTATGTTCCAGATGCCGAGGCGCGTTTGTAG
Transcript >Pro_DTO377G3_2|g2236.t1
ATGGAAATCGACCGGGTAGCTGTTATCGGCGCAGGCCCCTGCGGCCTAGGAGTTGCAAAGTATCTTCTTGCTGAA
CGAAAATTCAAGTCTATCACAATATTCGAACAGCGCGACCAACCTGGCGGTGTTTGGAACTACACCGGCGATGAG
GGCATCAGCACATCGGCACTTGCCCGTCCCAACCCGAGTCAGGAGCCTCAACAGCCCGTGAAAGGAACTTTTGCT
TCCCCTGTATACGACGCACTTGAAACAAACATCCCTAAATCGTTGATGCAGTTTACCGAGTATCCGTTCCCCGCG
GCCAGTGCGCTATTCCCAGCCCATACCGTTGTGCGAGACTATCTTCATCGGTATGCAGAGGAATTACTGCCATAC
ATACGTCTGAACTCTTTGATTTTGGATGTCACACTGTCAAAAAAGCATCCAAGGCCCGAGTGGACTGTAACCTGG
CGTGATCTGCAAACTAATGAGATTTTGGTCGAGCAATTCGATGCAGTGGTTGTCGCCAATGGTCACCATAATGAC
CCATATATCCCCAAAATCACAGGCTTAGATGAGTGGAGTCAAACCTATCCAGGCTCCATCATCCATTCATCTTCT
TATAGGCGTCCCGAATCATTTGCAAACAAGAAAGTGATTGTCGTCGGACACTCTGCCTCTGGTATTGACATCGCG
AACCAAATCGGCCGTGTATCAAAACACCCGCTGCTGATTTCGGAACGCACGGCAACAAATCTCTCTCCACAACAA
GCCGCCGTTGCCCAAAGCCTTCCTGAAATCAGTCTCCTCAGTGTCGAAGATGGCCGTGTGCAATTTGCCAATGGC
CATGAAGAGCGAGATGTTGATCACATCGTCTTTTGCACGGGCTACCACTTCTCTATTCCATTTTTGTCAAGTCTC
CAGCCATCTATCGTTACAGATGGCGTGCGTCCGCATCATTTGTACCAGCATGTGTTTTACAGCAAAGAGCCCACC
CTCGCTTTAATCGGGTTTCCCCAGCGGATTGTTCCATTCCCCTTCAGTCAGGCGCAAGGGGCATGGGTCGCGCGC
GTCCTGGCAGGACGACTCTCGCTGCCTTCCGAGGCTGAAATGGAGCGGTGGATTGGCGACTGGGTAGTAACTCGC
GGCGAGGGACGCGGCTTCAACACCCTTGCCTTTCCGCTCGATGCAGACTACATCAATTCGCTGTACGAGTTGAGC
TCGCATGCAGCTCGGAAGGATGGGTTGGAGAATGATGGGCGTGGTAAAAGGCCGCCCTTCTGGGGTGAAAAAGAG
AAGTGGACGCGTGAGAGATTCCCGTTGATCAAACAGGCGTCGCAGGTGCTTGGTAGTCGACGGGGTGAGATAAAG
GCTTTGGAAGACCTTGGCTTTGACTTCGAGAGGGATTATGTTCCAGATGCCGAGGCGCGTTTGTAG
Gene >Pro_DTO377G3_2|g2236.t1
ATGGAAATCGACCGGGTAGCTGTTATCGGCGCAGGCCCCTGCGGCCTAGGAGTTGCAAAGTATGTGTTTGCCTAT
CGAGACAAAGAAGAACGTGAATAATTAATAGTATGCCAAGGTATCTTCTTGCTGAACGAAAATTCAAGTCTATCA
CAATATTCGAACAGCGCGACCAACCTGGCGGTGTTTGGAACTACACCGGCGATGAGGGCATCAGCACATCGGCAC
TTGCCCGTCCCAACCCGAGTCAGGAGCCTCAACAGCCCGTGAAAGGAACTTTTGCTTCCCCTGTATACGACGCAC
TTGAAACAAACATCCCTAAATCGTTGATGCAGTTTACCGAGTATCCGTTCCCCGCGGCCAGTGCGCTATTCCCAG
CCCATACCGTTGTGCGAGACTATCTTCATCGGTATGCAGAGGAATTACTGCCATACATACGTCTGAACTCTTTGA
TTTTGGATGTCACACTGTCAAAAAAGCATCCAAGGCCCGAGTGGACTGTAACCTGGCGTGATCTGCAAACTAATG
AGATTTTGGTCGAGCAATTCGATGCAGTGGTTGTCGCCAATGGTCACCATAATGACCCATATATCCCCAAAATCA
CAGGCTTAGATGAGTGGAGTCAAACCTATCCAGGCTCCATCATCCATTCATCTTCTTATAGGCGTCCCGAATCAT
TTGCAAACAAGGTATGTACCCTCTAAAACAAACAATTACTGACTAAAAATAGAAAGTGATTGTCGTCGGACACTC
TGCCTCTGGTATTGACATCGCGAACCAAATCGGCCGTGTATCAAAACACCCGCTGCTGATTTCGGAACGCACGGC
AACAAATCTCTCTCCACAACAAGCCGCCGTTGCCCAAAGCCTTCCTGAAATCAGTCTCCTCAGTGTCGAAGATGG
CCGTGTGCAATTTGCCAATGGCCATGAAGAGCGAGATGTTGATCACATCGTCTTTTGCACGGGCTACCACTTCTC
TATTCCATTTTTGTCAAGTCTCCAGCCATCTATCGTTACAGATGGCGTGCGTCCGCATCATTTGTACCAGCATGT
GTTTTACAGCAAAGAGCCCACCCTCGCTTTAATCGGGTTTCCCCAGCGGATTGTTCCATTCCCCTTCAGTCAGGC
GCAAGGGGCATGGGTCGCGCGCGTCCTGGCAGGACGACTCTCGCTGCCTTCCGAGGCTGAAATGGAGCGGTGGAT
TGGCGACTGGGTAGTAACTCGCGGCGAGGGACGCGGCTTCAACACCCTTGCCTTTCCGCTCGATGCAGACTACAT
CAATTCGCTGTACGAGTTGAGCTCGCATGCAGCTCGGAAGGATGGGTTGGAGAATGATGGGCGTGGTAAAAGGCC
GCCCTTCTGGGGTGAAAAAGAGAAGTGGACGCGTGAGAGATTCCCGTTGATCAAACAGGCGTCGCAGGTGCTTGG
TAGTCGACGGGGTGAGATAAAGGCTTTGGAAGACCTTGGCTTTGACTTCGAGAGGGATTATGTTCCAGATGCCGA
GGCGCGTTTGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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