© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g2211.t1 |
| Gene name | |
| Location | scaffold_02:1940816..1941603 |
| Strand | - |
| Gene length (bp) | 787 |
| Transcript length (bp) | 732 |
| Coding sequence length (bp) | 732 |
| Protein length (aa) | 244 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF08651 | DASH_Duo1 | DASH complex subunit Duo1 | 4.2E-31 | 69 | 140 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0042729 | DASH complex | Yes |
| GO:0000278 | mitotic cell cycle | Yes |
| GO:0072686 | mitotic spindle | Yes |
| GO:0043228 | non-membrane-bounded organelle | No |
| GO:0007049 | cell cycle | No |
| GO:0008150 | biological_process | No |
| GO:0032991 | protein-containing complex | No |
| GO:0043232 | intracellular non-membrane-bounded organelle | No |
| GO:0009987 | cellular process | No |
| GO:0005819 | spindle | No |
| GO:0043226 | organelle | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0140513 | nuclear protein-containing complex | No |
| GO:0043229 | intracellular organelle | No |
| GO:0005575 | cellular_component | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 40 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g2211.t1 MAFRTTAEEMERLQLSDDDTEDLWNSPSKRVTRKKINPRTSDEKPTLEPRASHDGEDPLFDHQQSRETALRTELQ GVRNINEVIEGLLASLDSAKGNMETVSQTVTSASTLLNTWTRILSQTEHNQRLILNPDWQGATQDVIDIENQAIQ RQQAAERREQALQQQREAAARKAEEIEKRRAQVTRGTRGTRGTTRGTVRTTGLGRTPSVSTSRTATRGSTTTTQR PASGIARGSGIARGRGRV* |
| Coding | >Pro_DTO377G3_2|g2211.t1 ATGGCTTTCCGCACCACAGCAGAAGAAATGGAGAGGCTTCAGCTGTCTGATGATGACACAGAGGACCTCTGGAAT TCACCATCCAAGAGAGTGACCCGCAAAAAGATCAACCCAAGAACCTCCGATGAGAAACCTACACTAGAACCTCGA GCTTCCCATGATGGCGAGGATCCTCTCTTTGATCATCAACAGTCTCGAGAGACTGCGCTCCGGACAGAATTACAA GGTGTGCGGAATATCAACGAAGTAATAGAAGGGCTTCTGGCAAGTTTGGATTCCGCCAAAGGGAACATGGAGACG GTCTCACAAACCGTTACGTCGGCCTCGACACTCCTCAACACGTGGACTCGCATTCTCTCCCAAACTGAGCATAAT CAGCGACTGATCCTCAACCCCGATTGGCAAGGCGCTACTCAGGATGTGATCGATATCGAGAACCAAGCGATCCAA AGACAGCAAGCGGCAGAAAGACGCGAACAGGCACTTCAGCAGCAGCGAGAAGCAGCAGCGAGAAAGGCCGAGGAA ATCGAAAAACGACGCGCACAGGTCACTCGGGGTACTCGAGGCACCCGTGGAACTACGAGGGGTACAGTTCGAACT ACTGGATTAGGAAGAACGCCCAGTGTCAGCACAAGCCGCACGGCAACACGAGGGTCTACGACAACAACCCAACGG CCAGCCAGCGGGATTGCACGAGGTAGCGGGATTGCTCGCGGTCGGGGGAGAGTCTAG |
| Transcript | >Pro_DTO377G3_2|g2211.t1 ATGGCTTTCCGCACCACAGCAGAAGAAATGGAGAGGCTTCAGCTGTCTGATGATGACACAGAGGACCTCTGGAAT TCACCATCCAAGAGAGTGACCCGCAAAAAGATCAACCCAAGAACCTCCGATGAGAAACCTACACTAGAACCTCGA GCTTCCCATGATGGCGAGGATCCTCTCTTTGATCATCAACAGTCTCGAGAGACTGCGCTCCGGACAGAATTACAA GGTGTGCGGAATATCAACGAAGTAATAGAAGGGCTTCTGGCAAGTTTGGATTCCGCCAAAGGGAACATGGAGACG GTCTCACAAACCGTTACGTCGGCCTCGACACTCCTCAACACGTGGACTCGCATTCTCTCCCAAACTGAGCATAAT CAGCGACTGATCCTCAACCCCGATTGGCAAGGCGCTACTCAGGATGTGATCGATATCGAGAACCAAGCGATCCAA AGACAGCAAGCGGCAGAAAGACGCGAACAGGCACTTCAGCAGCAGCGAGAAGCAGCAGCGAGAAAGGCCGAGGAA ATCGAAAAACGACGCGCACAGGTCACTCGGGGTACTCGAGGCACCCGTGGAACTACGAGGGGTACAGTTCGAACT ACTGGATTAGGAAGAACGCCCAGTGTCAGCACAAGCCGCACGGCAACACGAGGGTCTACGACAACAACCCAACGG CCAGCCAGCGGGATTGCACGAGGTAGCGGGATTGCTCGCGGTCGGGGGAGAGTCTAG |
| Gene | >Pro_DTO377G3_2|g2211.t1 ATGGCTTTCCGCACCACAGCAGAAGAAATGGAGAGGCTTCAGCTGTCTGATGATGACACAGAGGACCTCTGGAAT TCACCATCCAAGAGAGTGACCCGCAAAAAGATCAACCCAAGAACCTCCGATGAGAAACCTACACTAGAACCTCGA GCTTCCCATGATGGCGAGGATCCTCTCTTTGATCATCAACAGTCTCGAGAGACTGCGCTCCGGACAGAATTACAA GGTGTGCGGAATATCAACGAAGTAATAGAAGGGCTTCTGGCAAGTTTGGATTCCGCCAAAGGGAACATGGAGGTA ATATATTCTTCTCATAATGCACGGTCAATACTTTGGCTAATTATCCGTATAGACGGTCTCACAAACCGTTACGTC GGCCTCGACACTCCTCAACACGTGGACTCGCATTCTCTCCCAAACTGAGCATAATCAGCGACTGATCCTCAACCC CGATTGGCAAGGCGCTACTCAGGATGTGATCGATATCGAGAACCAAGCGATCCAAAGACAGCAAGCGGCAGAAAG ACGCGAACAGGCACTTCAGCAGCAGCGAGAAGCAGCAGCGAGAAAGGCCGAGGAAATCGAAAAACGACGCGCACA GGTCACTCGGGGTACTCGAGGCACCCGTGGAACTACGAGGGGTACAGTTCGAACTACTGGATTAGGAAGAACGCC CAGTGTCAGCACAAGCCGCACGGCAACACGAGGGTCTACGACAACAACCCAACGGCCAGCCAGCGGGATTGCACG AGGTAGCGGGATTGCTCGCGGTCGGGGGAGAGTCTAG |