Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2209.t1
Gene name
Locationscaffold_02:1938922..1939285
Strand+
Gene length (bp)363
Transcript length (bp)243
Coding sequence length (bp)243
Protein length (aa) 81

Your browser does not support drawing a protein figure.

PFAM Domains

(None)

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 19 0.5

Transmembrane Domains

Domain # Start End Length
1 20 42 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2209.t1
MAPIPSDKSDSASESPIDLAAGYLGVLILAMCALLLLMLTSYIEYNRLLDQELLHPSKNSSRHNEVESKIFTQHN
HAEEN*
Coding >Pro_DTO377G3_2|g2209.t1
ATGGCTCCTATTCCCAGCGACAAGTCTGATTCAGCATCAGAATCACCAATTGATTTGGCTGCTGGATATTTAGGG
GTACTTATACTAGCAATGTGTGCTCTATTGTTGCTCATGCTTACATCATATATTGAATATAATCGGCTGCTGGAT
CAAGAACTGCTACATCCGAGCAAAAACAGCTCTCGGCACAACGAGGTTGAAAGCAAAATCTTTACTCAGCACAAT
CACGCTGAAGAAAACTAG
Transcript >Pro_DTO377G3_2|g2209.t1
ATGGCTCCTATTCCCAGCGACAAGTCTGATTCAGCATCAGAATCACCAATTGATTTGGCTGCTGGATATTTAGGG
GTACTTATACTAGCAATGTGTGCTCTATTGTTGCTCATGCTTACATCATATATTGAATATAATCGGCTGCTGGAT
CAAGAACTGCTACATCCGAGCAAAAACAGCTCTCGGCACAACGAGGTTGAAAGCAAAATCTTTACTCAGCACAAT
CACGCTGAAGAAAACTAG
Gene >Pro_DTO377G3_2|g2209.t1
ATGGCTCCTATTCCCAGCGACAAGTCTGATTCAGCATCAGAATCACCAATTGATTTGGCTGCTGGATATTTAGGG
GTACTTATACTAGCAATGTGTGCTCTATTGTTGCTCATGCTTGTATGCGCCATCGTGATCCGGTATCTATGACCA
CCGAGAACTAAGATTGAACATGATGATCTTATAAGAAAGGCAAACTTTACAGAGAAGCTGATGCTAATATTACTG
TCATTCTGCTAGACATCATATATTGAATATAATCGGCTGCTGGATCAAGAACTGCTACATCCGAGCAAAAACAGC
TCTCGGCACAACGAGGTTGAAAGCAAAATCTTTACTCAGCACAATCACGCTGAAGAAAACTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail