Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2193.t1
Gene name
Locationscaffold_02:1901302..1901840
Strand-
Gene length (bp)538
Transcript length (bp)468
Coding sequence length (bp)468
Protein length (aa) 156

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00173 Cyt-b5 Cytochrome b5-like Heme/Steroid binding domain 1.0E-13 46 144

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.5

Transmembrane Domains

Domain # Start End Length
1 7 24 17

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2193.t1
MSIATPINLVLVSLFGVLVYWHFRPRAPITLPRAPPPTVFKTYIPKTLIEFNGEEGRPVYLSVRGRVFDVTPGRN
FYGPGGPYENFAGRDASRGLAFQSFDEEMLTTDLSAPLDDLKDLDADQLENLQSWEDRFMEKYLVVGKLVAEGDP
EAPKS*
Coding >Pro_DTO377G3_2|g2193.t1
ATGTCTATCGCGACGCCCATCAACCTAGTCTTAGTCTCGCTCTTCGGAGTCTTGGTGTACTGGCACTTCCGTCCC
AGGGCGCCCATCACTCTCCCCCGTGCGCCGCCGCCAACTGTCTTTAAGACCTACATTCCCAAAACTCTTATTGAG
TTCAACGGCGAGGAAGGCCGCCCCGTTTACTTGTCTGTCCGCGGGCGCGTCTTCGACGTCACTCCTGGCAGGAAC
TTCTATGGACCGGGCGGACCTTACGAGAACTTCGCTGGCCGGGACGCGTCGCGCGGCTTGGCTTTCCAGAGCTTC
GATGAGGAAATGCTGACCACGGATCTGTCGGCGCCGTTGGATGATTTGAAGGATTTGGATGCGGATCAGCTGGAG
AACCTGCAGTCCTGGGAAGACCGCTTCATGGAGAAGTACTTGGTCGTTGGAAAGCTGGTGGCTGAGGGTGACCCC
GAAGCTCCTAAATCGTGA
Transcript >Pro_DTO377G3_2|g2193.t1
ATGTCTATCGCGACGCCCATCAACCTAGTCTTAGTCTCGCTCTTCGGAGTCTTGGTGTACTGGCACTTCCGTCCC
AGGGCGCCCATCACTCTCCCCCGTGCGCCGCCGCCAACTGTCTTTAAGACCTACATTCCCAAAACTCTTATTGAG
TTCAACGGCGAGGAAGGCCGCCCCGTTTACTTGTCTGTCCGCGGGCGCGTCTTCGACGTCACTCCTGGCAGGAAC
TTCTATGGACCGGGCGGACCTTACGAGAACTTCGCTGGCCGGGACGCGTCGCGCGGCTTGGCTTTCCAGAGCTTC
GATGAGGAAATGCTGACCACGGATCTGTCGGCGCCGTTGGATGATTTGAAGGATTTGGATGCGGATCAGCTGGAG
AACCTGCAGTCCTGGGAAGACCGCTTCATGGAGAAGTACTTGGTCGTTGGAAAGCTGGTGGCTGAGGGTGACCCC
GAAGCTCCTAAATCGTGA
Gene >Pro_DTO377G3_2|g2193.t1
ATGTCTATCGCGACGCCCATCAACCTAGTCTTAGTCTCGCTCTTCGGAGTCTTGGTGTACTGGCACTTCCGTCCC
AGGGCGCCCATCACTCTCCCCCGTGCGCCGCCGCCAACTGTCTTTAAGACCTACATTCCCAAAACTCTTATTGAG
TTCAACGGCGAGGAAGGCCGCCCCGTTTACTTGTCTGTCCGCGGGCGCGTCTTCGACGTCACTCCTGGCAGGAAC
TTCTATGGACCGGTATGTGTTTGAAATTCGCGAAAGAACACCGGGTGGCGCTGTTGGAGCTGAAGCTGACGAAAT
GTAACAGGGCGGACCTTACGAGAACTTCGCTGGCCGGGACGCGTCGCGCGGCTTGGCTTTCCAGAGCTTCGATGA
GGAAATGCTGACCACGGATCTGTCGGCGCCGTTGGATGATTTGAAGGATTTGGATGCGGATCAGCTGGAGAACCT
GCAGTCCTGGGAAGACCGCTTCATGGAGAAGTACTTGGTCGTTGGAAAGCTGGTGGCTGAGGGTGACCCCGAAGC
TCCTAAATCGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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