Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO377G3_2\|g2191.t1
Gene name
Location	scaffold_02:1894432..1895519
Strand	-
Gene length (bp)	1087
Transcript length (bp)	924
Coding sequence length (bp)	924
Protein length (aa)	308

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF04193	PQ-loop	PQ loop repeat	4.0E-09	20	72
PF04193	PQ-loop	PQ loop repeat	5.6E-13	175	229

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 23	0.5

Transmembrane Domains

Domain #	Start	End	Length
1	15	34	19
2	47	69	22
3	95	117	22
4	143	165	22
5	169	191	22
6	203	225	22
7	235	257	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g2191.t1 MDSLTPYCRELASPGIFQTALSIQIILGILLSYLPQHIRIIARRSSFGISPYFILLGVTSGTSAFANILVFPSTA QDVACCRDISGFACFAGLLGVFQMAMQWLAFFSILLLFVIYFPRATSPTDPVGSVSSTSSGPTYRTALIVTGICL LHALVTIIISLAVELRYPAAVATWANFLGILAAILASIQYFPQIYTTFRLRCVGSLSIPMMCIQTPGSLVWAASL AARKGWSGWSIWGVLVVTACLQGTLLTMAIYFEYFGSNNKGKAGHVDQTGEPDESAPADESAQQEPVHEERPSEE TPLLQSQ*
Coding	>Pro_DTO377G3_2\|g2191.t1 ATGGACTCATTAACACCCTACTGCCGCGAGCTGGCCTCGCCAGGCATCTTCCAAACTGCTCTATCTATCCAGATT ATCCTCGGGATCCTCCTCTCATACCTCCCCCAACACATCCGTATCATCGCCCGGCGAAGCTCCTTCGGTATCTCA CCATACTTTATCCTCCTAGGTGTAACATCAGGGACCTCAGCTTTCGCCAATATCCTGGTATTCCCATCCACCGCA CAAGATGTCGCCTGCTGCCGGGATATCAGCGGATTCGCTTGCTTCGCAGGGCTACTGGGTGTATTCCAGATGGCC ATGCAATGGCTTGCTTTCTTTTCTATTCTTTTGCTATTCGTGATCTACTTCCCGCGCGCTACATCCCCCACAGAC CCGGTGGGCAGTGTGTCTTCCACCTCCAGCGGACCGACGTACCGCACCGCGCTCATCGTAACGGGGATATGTCTA CTGCACGCGCTCGTTACAATTATAATTTCCCTAGCGGTTGAGCTACGCTACCCGGCCGCTGTTGCGACCTGGGCT AACTTCCTCGGTATCCTGGCTGCGATCCTCGCGTCGATCCAGTACTTCCCGCAGATATACACTACCTTCCGGCTG CGTTGCGTGGGGAGCTTGAGTATCCCCATGATGTGCATCCAGACGCCCGGAAGTCTTGTCTGGGCTGCTAGTTTG GCTGCCCGTAAGGGTTGGAGTGGCTGGAGTATCTGGGGCGTGCTTGTTGTCACGGCTTGCTTGCAGGGTACCTTG TTGACGATGGCAATCTATTTTGAGTACTTTGGATCCAACAACAAGGGGAAAGCTGGGCACGTTGATCAAACCGGG GAGCCCGATGAGTCGGCTCCTGCTGATGAGAGCGCTCAGCAAGAACCTGTGCATGAGGAGCGACCATCTGAGGAG ACGCCGTTGCTTCAGAGCCAGTGA
Transcript	>Pro_DTO377G3_2\|g2191.t1 ATGGACTCATTAACACCCTACTGCCGCGAGCTGGCCTCGCCAGGCATCTTCCAAACTGCTCTATCTATCCAGATT ATCCTCGGGATCCTCCTCTCATACCTCCCCCAACACATCCGTATCATCGCCCGGCGAAGCTCCTTCGGTATCTCA CCATACTTTATCCTCCTAGGTGTAACATCAGGGACCTCAGCTTTCGCCAATATCCTGGTATTCCCATCCACCGCA CAAGATGTCGCCTGCTGCCGGGATATCAGCGGATTCGCTTGCTTCGCAGGGCTACTGGGTGTATTCCAGATGGCC ATGCAATGGCTTGCTTTCTTTTCTATTCTTTTGCTATTCGTGATCTACTTCCCGCGCGCTACATCCCCCACAGAC CCGGTGGGCAGTGTGTCTTCCACCTCCAGCGGACCGACGTACCGCACCGCGCTCATCGTAACGGGGATATGTCTA CTGCACGCGCTCGTTACAATTATAATTTCCCTAGCGGTTGAGCTACGCTACCCGGCCGCTGTTGCGACCTGGGCT AACTTCCTCGGTATCCTGGCTGCGATCCTCGCGTCGATCCAGTACTTCCCGCAGATATACACTACCTTCCGGCTG CGTTGCGTGGGGAGCTTGAGTATCCCCATGATGTGCATCCAGACGCCCGGAAGTCTTGTCTGGGCTGCTAGTTTG GCTGCCCGTAAGGGTTGGAGTGGCTGGAGTATCTGGGGCGTGCTTGTTGTCACGGCTTGCTTGCAGGGTACCTTG TTGACGATGGCAATCTATTTTGAGTACTTTGGATCCAACAACAAGGGGAAAGCTGGGCACGTTGATCAAACCGGG GAGCCCGATGAGTCGGCTCCTGCTGATGAGAGCGCTCAGCAAGAACCTGTGCATGAGGAGCGACCATCTGAGGAG ACGCCGTTGCTTCAGAGCCAGTGA
Gene	>Pro_DTO377G3_2\|g2191.t1 ATGGACTCATTAACACCCTACTGCCGCGAGCTGGCCTCGCCAGGCATCTTCCAAACTGCTCTATCTATGTACGTG CCCCTAGAATTAAAATCAGTCCCCAGTCACTGACGTACCATAGCCAGATTATCCTCGGGATCCTCCTCTCATACC TCCCCCAACACATCCGTATCATCGCCCGGCGAAGCTCCTTCGGTATCTCACCATACTTTATCCTCCTAGGTGTAA CATCAGGGACCTCAGCTTTCGCCAATATCCTGGTATTCCCATCCACCGCACAAGATGTCGCCTGCTGCCGGGATA TCAGCGGATTCGCTTGCTTCGCAGGGCTACTGGGTGTATTCCAGATGGCCATGCAATGGCTTGCTTTCTTTTCTA TGTGAGTCGAACGCAGCGCTGATTTATATCTGATTCCGAATTCCCGATTGAACACCCACACCCATACCATACCAT ACCATACCCACGCGAGCTTGTCTGACCATATCTACATAGTCTTTTGCTATTCGTGATCTACTTCCCGCGCGCTAC ATCCCCCACAGACCCGGTGGGCAGTGTGTCTTCCACCTCCAGCGGACCGACGTACCGCACCGCGCTCATCGTAAC GGGGATATGTCTACTGCACGCGCTCGTTACAATTATAATTTCCCTAGCGGTTGAGCTACGCTACCCGGCCGCTGT TGCGACCTGGGCTAACTTCCTCGGTATCCTGGCTGCGATCCTCGCGTCGATCCAGTACTTCCCGCAGATATACAC TACCTTCCGGCTGCGTTGCGTGGGGAGCTTGAGTATCCCCATGATGTGCATCCAGACGCCCGGAAGTCTTGTCTG GGCTGCTAGTTTGGCTGCCCGTAAGGGTTGGAGTGGCTGGAGTATCTGGGGCGTGCTTGTTGTCACGGCTTGCTT GCAGGGTACCTTGTTGACGATGGCAATCTATTTTGAGTACTTTGGATCCAACAACAAGGGGAAAGCTGGGCACGT TGATCAAACCGGGGAGCCCGATGAGTCGGCTCCTGCTGATGAGAGCGCTCAGCAAGAACCTGTGCATGAGGAGCG ACCATCTGAGGAGACGCCGTTGCTTCAGAGCCAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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