Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2191.t1
Gene name
Locationscaffold_02:1894432..1895519
Strand-
Gene length (bp)1087
Transcript length (bp)924
Coding sequence length (bp)924
Protein length (aa) 308

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04193 PQ-loop PQ loop repeat 4.4E-09 20 72
PF04193 PQ-loop PQ loop repeat 8.0E-13 175 229

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 23 0.5

Transmembrane Domains

Domain # Start End Length
1 15 34 19
2 47 69 22
3 95 117 22
4 143 165 22
5 169 191 22
6 203 225 22
7 235 257 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2191.t1
MDSLTPYCRELASPGIFQTALSIQIILGILLSYLPQHIRIIARRSSFGISPYFILLGVTSGTSAFANILVFPSTA
QDVACCRDISGFACFAGLLGVFQMAMQWLAFFSILLLFVIYFPRATSPTDPVGSVSSTSSGPTYRTALIVTGICL
LHALVTIIISLAVELRYPAAVATWANFLGILAAILASIQYFPQIYTTFRLRCVGSLSIPMMCIQTPGSLVWAASL
AARKGWSGWSIWGVLVVTACLQGTLLTMAIYFEYFGSNNKGKAGHVDQTGEPDESAPADESAQQEPVHEERPSEE
TPLLQSQ*
Coding >Pro_DTO377G3_2|g2191.t1
ATGGACTCATTAACACCCTACTGCCGCGAGCTGGCCTCGCCAGGCATCTTCCAAACTGCTCTATCTATCCAGATT
ATCCTCGGGATCCTCCTCTCATACCTCCCCCAACACATCCGTATCATCGCCCGGCGAAGCTCCTTCGGTATCTCA
CCATACTTTATCCTCCTAGGTGTAACATCAGGGACCTCAGCTTTCGCCAATATCCTGGTATTCCCATCCACCGCA
CAAGATGTCGCCTGCTGCCGGGATATCAGCGGATTCGCTTGCTTCGCAGGGCTACTGGGTGTATTCCAGATGGCC
ATGCAATGGCTTGCTTTCTTTTCTATTCTTTTGCTATTCGTGATCTACTTCCCGCGCGCTACATCCCCCACAGAC
CCGGTGGGCAGTGTGTCTTCCACCTCCAGCGGACCGACGTACCGCACCGCGCTCATCGTAACGGGGATATGTCTA
CTGCACGCGCTCGTTACAATTATAATTTCCCTAGCGGTTGAGCTACGCTACCCGGCCGCTGTTGCGACCTGGGCT
AACTTCCTCGGTATCCTGGCTGCGATCCTCGCGTCGATCCAGTACTTCCCGCAGATATACACTACCTTCCGGCTG
CGTTGCGTGGGGAGCTTGAGTATCCCCATGATGTGCATCCAGACGCCCGGAAGTCTTGTCTGGGCTGCTAGTTTG
GCTGCCCGTAAGGGTTGGAGTGGCTGGAGTATCTGGGGCGTGCTTGTTGTCACGGCTTGCTTGCAGGGTACCTTG
TTGACGATGGCAATCTATTTTGAGTACTTTGGATCCAACAACAAGGGGAAAGCTGGGCACGTTGATCAAACCGGG
GAGCCCGATGAGTCGGCTCCTGCTGATGAGAGCGCTCAGCAAGAACCTGTGCATGAGGAGCGACCATCTGAGGAG
ACGCCGTTGCTTCAGAGCCAGTGA
Transcript >Pro_DTO377G3_2|g2191.t1
ATGGACTCATTAACACCCTACTGCCGCGAGCTGGCCTCGCCAGGCATCTTCCAAACTGCTCTATCTATCCAGATT
ATCCTCGGGATCCTCCTCTCATACCTCCCCCAACACATCCGTATCATCGCCCGGCGAAGCTCCTTCGGTATCTCA
CCATACTTTATCCTCCTAGGTGTAACATCAGGGACCTCAGCTTTCGCCAATATCCTGGTATTCCCATCCACCGCA
CAAGATGTCGCCTGCTGCCGGGATATCAGCGGATTCGCTTGCTTCGCAGGGCTACTGGGTGTATTCCAGATGGCC
ATGCAATGGCTTGCTTTCTTTTCTATTCTTTTGCTATTCGTGATCTACTTCCCGCGCGCTACATCCCCCACAGAC
CCGGTGGGCAGTGTGTCTTCCACCTCCAGCGGACCGACGTACCGCACCGCGCTCATCGTAACGGGGATATGTCTA
CTGCACGCGCTCGTTACAATTATAATTTCCCTAGCGGTTGAGCTACGCTACCCGGCCGCTGTTGCGACCTGGGCT
AACTTCCTCGGTATCCTGGCTGCGATCCTCGCGTCGATCCAGTACTTCCCGCAGATATACACTACCTTCCGGCTG
CGTTGCGTGGGGAGCTTGAGTATCCCCATGATGTGCATCCAGACGCCCGGAAGTCTTGTCTGGGCTGCTAGTTTG
GCTGCCCGTAAGGGTTGGAGTGGCTGGAGTATCTGGGGCGTGCTTGTTGTCACGGCTTGCTTGCAGGGTACCTTG
TTGACGATGGCAATCTATTTTGAGTACTTTGGATCCAACAACAAGGGGAAAGCTGGGCACGTTGATCAAACCGGG
GAGCCCGATGAGTCGGCTCCTGCTGATGAGAGCGCTCAGCAAGAACCTGTGCATGAGGAGCGACCATCTGAGGAG
ACGCCGTTGCTTCAGAGCCAGTGA
Gene >Pro_DTO377G3_2|g2191.t1
ATGGACTCATTAACACCCTACTGCCGCGAGCTGGCCTCGCCAGGCATCTTCCAAACTGCTCTATCTATGTACGTG
CCCCTAGAATTAAAATCAGTCCCCAGTCACTGACGTACCATAGCCAGATTATCCTCGGGATCCTCCTCTCATACC
TCCCCCAACACATCCGTATCATCGCCCGGCGAAGCTCCTTCGGTATCTCACCATACTTTATCCTCCTAGGTGTAA
CATCAGGGACCTCAGCTTTCGCCAATATCCTGGTATTCCCATCCACCGCACAAGATGTCGCCTGCTGCCGGGATA
TCAGCGGATTCGCTTGCTTCGCAGGGCTACTGGGTGTATTCCAGATGGCCATGCAATGGCTTGCTTTCTTTTCTA
TGTGAGTCGAACGCAGCGCTGATTTATATCTGATTCCGAATTCCCGATTGAACACCCACACCCATACCATACCAT
ACCATACCCACGCGAGCTTGTCTGACCATATCTACATAGTCTTTTGCTATTCGTGATCTACTTCCCGCGCGCTAC
ATCCCCCACAGACCCGGTGGGCAGTGTGTCTTCCACCTCCAGCGGACCGACGTACCGCACCGCGCTCATCGTAAC
GGGGATATGTCTACTGCACGCGCTCGTTACAATTATAATTTCCCTAGCGGTTGAGCTACGCTACCCGGCCGCTGT
TGCGACCTGGGCTAACTTCCTCGGTATCCTGGCTGCGATCCTCGCGTCGATCCAGTACTTCCCGCAGATATACAC
TACCTTCCGGCTGCGTTGCGTGGGGAGCTTGAGTATCCCCATGATGTGCATCCAGACGCCCGGAAGTCTTGTCTG
GGCTGCTAGTTTGGCTGCCCGTAAGGGTTGGAGTGGCTGGAGTATCTGGGGCGTGCTTGTTGTCACGGCTTGCTT
GCAGGGTACCTTGTTGACGATGGCAATCTATTTTGAGTACTTTGGATCCAACAACAAGGGGAAAGCTGGGCACGT
TGATCAAACCGGGGAGCCCGATGAGTCGGCTCCTGCTGATGAGAGCGCTCAGCAAGAACCTGTGCATGAGGAGCG
ACCATCTGAGGAGACGCCGTTGCTTCAGAGCCAGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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