© 2022 - Robin Ohm - Utrecht University - The Netherlands
Built with Python Django and Wagtail
| Protein ID | Pro_DTO377G3_2|g2174.t1 |
| Gene name | |
| Location | scaffold_02:1840782..1842369 |
| Strand | - |
| Gene length (bp) | 1587 |
| Transcript length (bp) | 1491 |
| Coding sequence length (bp) | 1491 |
| Protein length (aa) | 497 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 1.3E-29 | 28 | 395 |
| PF06779 | MFS_4 | Uncharacterised MFS-type transporter YbfB | 1.5E-07 | 50 | 212 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 14 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 61 | 83 | 22 |
| 2 | 93 | 115 | 22 |
| 3 | 120 | 142 | 22 |
| 4 | 152 | 174 | 22 |
| 5 | 181 | 203 | 22 |
| 6 | 288 | 310 | 22 |
| 7 | 317 | 336 | 19 |
| 8 | 346 | 365 | 19 |
| 9 | 377 | 399 | 22 |
| 10 | 409 | 431 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g2174.t1 MAMETITPDHAMAKRVLRKIDRRLVPLLFTTYMFNFMDKTILSSASVFGMRDDTGLVGQQYSWVSSIFYFGYLGW VYPTTLLITRLPAAKYLTANTLFWGAVVALTAACTNFGGLITVRFLLGVAEATITPAFMFITSTWYTRDEIPTRT GLWFAGNSVGGIISSLLAYGLGHVKDNVGPWRWMFIVLGCATFLWGFAVWALLPDSISKAKFLSEEERQFASNRV VIAGTGATEKTAWRWDQVVECLMDPKTWLIFGLELCTQIPNGGTQNFANLVIVSFGFTNLQSTLLTIPYSLITVA TITGTGWLAGRFRQLNCLLIVAVVIPCVVGSAIIYSRAHIVLGVQFFGYFLLSTGPAAMPLAMSLVQANYRGVTK KMTVTAMLFLAYCAGNISGPQFFLSEEAPTYNTAFRTIMICYALAVVLALVLRFYLQWSNARRVRLEGFEGSAGN SGAVGGKGLDADDSNNVADMVNRVQLVSNDYEDVTDWKTPGFRYRY* |
| Coding | >Pro_DTO377G3_2|g2174.t1 ATGGCCATGGAAACAATTACCCCCGACCACGCTATGGCGAAAAGAGTCCTGAGGAAGATTGACAGACGACTGGTA CCACTGCTTTTCACGACTTATATGTTTAATTTCATGGATAAAACCATCTTGTCCAGCGCATCTGTCTTCGGGATG AGGGACGATACTGGCTTGGTTGGCCAACAGTACAGCTGGGTATCATCAATCTTCTACTTTGGCTACCTGGGCTGG GTATATCCAACAACCTTGCTGATTACCCGTCTGCCCGCCGCCAAATACTTGACGGCCAACACGCTATTCTGGGGT GCTGTGGTGGCCCTCACTGCAGCCTGCACCAACTTTGGCGGTCTCATTACAGTTCGCTTCTTGCTTGGAGTCGCT GAAGCAACCATCACGCCGGCGTTTATGTTTATCACGTCGACGTGGTACACGCGTGACGAGATCCCTACTAGGACA GGCCTATGGTTCGCCGGAAACAGTGTCGGTGGTATTATTTCCAGTCTCCTCGCCTACGGACTAGGTCACGTCAAG GATAACGTCGGGCCATGGAGGTGGATGTTCATCGTCCTCGGCTGCGCGACATTCCTCTGGGGATTCGCTGTCTGG GCTCTACTACCAGACTCAATCTCCAAGGCTAAATTCCTCTCGGAAGAGGAACGCCAGTTTGCAAGCAACCGAGTC GTCATTGCAGGCACAGGTGCAACAGAGAAGACCGCATGGAGATGGGACCAAGTCGTCGAATGCCTGATGGATCCA AAGACGTGGCTTATATTCGGACTGGAGCTTTGCACCCAGATCCCCAACGGAGGAACGCAGAACTTTGCCAATCTA GTGATTGTCTCGTTCGGCTTCACAAACTTGCAATCCACGCTGCTCACCATCCCTTACTCGCTCATCACCGTGGCC ACAATCACCGGAACGGGCTGGCTGGCCGGTCGTTTCCGCCAACTGAACTGCCTGCTTATCGTGGCCGTTGTGATC CCTTGCGTCGTCGGCAGTGCCATTATCTACTCCCGCGCGCATATCGTCCTGGGCGTGCAATTCTTTGGATATTTC CTCTTGTCGACTGGTCCGGCCGCAATGCCGCTTGCCATGTCGCTGGTCCAGGCTAATTATCGTGGTGTCACTAAG AAAATGACAGTCACTGCAATGCTCTTCCTGGCTTACTGCGCTGGAAATATCTCTGGACCTCAGTTCTTCCTTAGT GAGGAGGCCCCGACTTATAACACGGCCTTCCGCACGATCATGATTTGCTATGCCCTGGCGGTCGTATTGGCGTTG GTGCTGCGCTTCTACTTGCAGTGGTCTAATGCTCGCCGTGTGCGTCTGGAGGGCTTTGAGGGTAGTGCTGGAAAC TCGGGTGCTGTTGGTGGGAAGGGGTTGGACGCTGACGATTCGAATAATGTGGCGGATATGGTGAACCGGGTGCAA TTGGTATCGAATGACTATGAGGATGTCACGGATTGGAAGACGCCCGGCTTCAGATATCGTTATTAA |
| Transcript | >Pro_DTO377G3_2|g2174.t1 ATGGCCATGGAAACAATTACCCCCGACCACGCTATGGCGAAAAGAGTCCTGAGGAAGATTGACAGACGACTGGTA CCACTGCTTTTCACGACTTATATGTTTAATTTCATGGATAAAACCATCTTGTCCAGCGCATCTGTCTTCGGGATG AGGGACGATACTGGCTTGGTTGGCCAACAGTACAGCTGGGTATCATCAATCTTCTACTTTGGCTACCTGGGCTGG GTATATCCAACAACCTTGCTGATTACCCGTCTGCCCGCCGCCAAATACTTGACGGCCAACACGCTATTCTGGGGT GCTGTGGTGGCCCTCACTGCAGCCTGCACCAACTTTGGCGGTCTCATTACAGTTCGCTTCTTGCTTGGAGTCGCT GAAGCAACCATCACGCCGGCGTTTATGTTTATCACGTCGACGTGGTACACGCGTGACGAGATCCCTACTAGGACA GGCCTATGGTTCGCCGGAAACAGTGTCGGTGGTATTATTTCCAGTCTCCTCGCCTACGGACTAGGTCACGTCAAG GATAACGTCGGGCCATGGAGGTGGATGTTCATCGTCCTCGGCTGCGCGACATTCCTCTGGGGATTCGCTGTCTGG GCTCTACTACCAGACTCAATCTCCAAGGCTAAATTCCTCTCGGAAGAGGAACGCCAGTTTGCAAGCAACCGAGTC GTCATTGCAGGCACAGGTGCAACAGAGAAGACCGCATGGAGATGGGACCAAGTCGTCGAATGCCTGATGGATCCA AAGACGTGGCTTATATTCGGACTGGAGCTTTGCACCCAGATCCCCAACGGAGGAACGCAGAACTTTGCCAATCTA GTGATTGTCTCGTTCGGCTTCACAAACTTGCAATCCACGCTGCTCACCATCCCTTACTCGCTCATCACCGTGGCC ACAATCACCGGAACGGGCTGGCTGGCCGGTCGTTTCCGCCAACTGAACTGCCTGCTTATCGTGGCCGTTGTGATC CCTTGCGTCGTCGGCAGTGCCATTATCTACTCCCGCGCGCATATCGTCCTGGGCGTGCAATTCTTTGGATATTTC CTCTTGTCGACTGGTCCGGCCGCAATGCCGCTTGCCATGTCGCTGGTCCAGGCTAATTATCGTGGTGTCACTAAG AAAATGACAGTCACTGCAATGCTCTTCCTGGCTTACTGCGCTGGAAATATCTCTGGACCTCAGTTCTTCCTTAGT GAGGAGGCCCCGACTTATAACACGGCCTTCCGCACGATCATGATTTGCTATGCCCTGGCGGTCGTATTGGCGTTG GTGCTGCGCTTCTACTTGCAGTGGTCTAATGCTCGCCGTGTGCGTCTGGAGGGCTTTGAGGGTAGTGCTGGAAAC TCGGGTGCTGTTGGTGGGAAGGGGTTGGACGCTGACGATTCGAATAATGTGGCGGATATGGTGAACCGGGTGCAA TTGGTATCGAATGACTATGAGGATGTCACGGATTGGAAGACGCCCGGCTTCAGATATCGTTATTAA |
| Gene | >Pro_DTO377G3_2|g2174.t1 ATGGCCATGGAAACAATTACCCCCGACCACGCTATGGCGAAAAGAGTCCTGAGGAAGATTGACAGACGACTGGTA CCACTGCTTTTCACGACTTATATGTTTAATTTCATGGATAAAACCATCTTGTCCAGCGCATCTGTCTTCGGGATG AGGGACGATACTGTAAGAACATGTCCAGAACAAACAAGAACCACAACTAATATCATTTTTAGGGCTTGGTTGGCC AACAGTACAGCTGGGTATCATCAATCTTCTACTTTGGCTACCTGGGCTGGGTATATCCAACAACCTTGCTGATTA CCCGTCTGCCCGCCGCCAAATACTTGACGGCCAACACGCTATTCTGGGGTGCTGTGGTGGCCCTCACTGCAGCCT GCACCAACTTTGGCGGTCTCATTACAGTTCGCTTCTTGCTTGGAGTCGCTGAAGCAACCATCACGCCGGCGTTTA TGTTTATCACGTCGACGTGGTACACGCGTGACGAGATCCCTACTAGGACAGGCCTATGGTTCGCCGGAAACGTAT GTTGTTCCTGTCAATATATTGAATAAAAGCTCATCTTTACAGAGTGTCGGTGGTATTATTTCCAGTCTCCTCGCC TACGGACTAGGTCACGTCAAGGATAACGTCGGGCCATGGAGGTGGATGTTCATCGTCCTCGGCTGCGCGACATTC CTCTGGGGATTCGCTGTCTGGGCTCTACTACCAGACTCAATCTCCAAGGCTAAATTCCTCTCGGAAGAGGAACGC CAGTTTGCAAGCAACCGAGTCGTCATTGCAGGCACAGGTGCAACAGAGAAGACCGCATGGAGATGGGACCAAGTC GTCGAATGCCTGATGGATCCAAAGACGTGGCTTATATTCGGACTGGAGCTTTGCACCCAGATCCCCAACGGAGGA ACGCAGAACTTTGCCAATCTAGTGATTGTCTCGTTCGGCTTCACAAACTTGCAATCCACGCTGCTCACCATCCCT TACTCGCTCATCACCGTGGCCACAATCACCGGAACGGGCTGGCTGGCCGGTCGTTTCCGCCAACTGAACTGCCTG CTTATCGTGGCCGTTGTGATCCCTTGCGTCGTCGGCAGTGCCATTATCTACTCCCGCGCGCATATCGTCCTGGGC GTGCAATTCTTTGGATATTTCCTCTTGTCGACTGGTCCGGCCGCAATGCCGCTTGCCATGTCGCTGGTCCAGGCT AATTATCGTGGTGTCACTAAGAAAATGACAGTCACTGCAATGCTCTTCCTGGCTTACTGCGCTGGAAATATCTCT GGACCTCAGTTCTTCCTTAGTGAGGAGGCCCCGACTTATAACACGGCCTTCCGCACGATCATGATTTGCTATGCC CTGGCGGTCGTATTGGCGTTGGTGCTGCGCTTCTACTTGCAGTGGTCTAATGCTCGCCGTGTGCGTCTGGAGGGC TTTGAGGGTAGTGCTGGAAACTCGGGTGCTGTTGGTGGGAAGGGGTTGGACGCTGACGATTCGAATAATGTGGCG GATATGGTGAACCGGGTGCAATTGGTATCGAATGACTATGAGGATGTCACGGATTGGAAGACGCCCGGCTTCAGA TATCGTTATTAA |