Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g215.t1
Gene name
Locationscaffold_01:558088..559200
Strand+
Gene length (bp)1112
Transcript length (bp)1059
Coding sequence length (bp)1059
Protein length (aa) 353

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01008 IF-2B Initiation factor 2 subunit family 1.5E-49 32 340

GO

GO Term Description Terminal node
GO:0044237 cellular metabolic process Yes
GO:0008152 metabolic process No
GO:0009987 cellular process No
GO:0008150 biological_process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 53 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g215.t1
MASTTSDAAVADTKPFDIVATYNELLRSDADLTMPIAAIEALVLLLTQSASSTISETLDLLEKSTAHLKRSIPNP
IGLSAGTDLFQRYLITTLQRPGQLGPAGDFKAIRTHLLSNGRLFIRRAKESRDKIAAFGRGFIRDGSTILTNGGS
RAVAALLQKAADEEGGPAVRFRVIYVLSSISQDCKQPNEEPEGMETVRALRAKGVPVSTIPESAVAYSLGKADMV
IVGAEGVVENGGIVSRMGTYQIGLLAKAIGKPFYVVAESHKFVRLYPLGQYDLPIEQQVLEFKSEEDLEEERKQQ
SSVTKTDGDTSIKLPLCDSVDFTPPHLISALITDSGVLTPSAVSEELIKIWF*
Coding >Pro_DTO377G3_2|g215.t1
ATGGCTTCTACTACTTCAGATGCGGCTGTAGCCGATACGAAACCATTCGACATTGTCGCAACCTACAATGAACTC
CTCCGCTCCGATGCCGACCTCACTATGCCTATTGCGGCCATTGAAGCTCTGGTTCTTCTTCTCACACAGTCAGCC
TCTTCAACGATATCAGAGACTTTGGATCTACTCGAAAAATCCACCGCCCACCTGAAACGCTCCATTCCCAACCCC
ATCGGTCTATCTGCCGGAACCGATCTTTTCCAACGATACCTGATCACCACACTACAACGCCCTGGGCAACTAGGT
CCCGCGGGCGATTTCAAGGCCATCCGCACACATCTCTTGTCAAACGGACGGCTGTTTATCCGACGCGCCAAGGAA
AGCCGAGACAAAATCGCAGCATTCGGCCGTGGCTTCATTCGCGATGGCAGCACCATCCTTACAAACGGTGGCTCC
CGCGCTGTCGCAGCACTATTGCAAAAAGCCGCAGATGAGGAGGGTGGCCCCGCTGTGCGGTTCCGTGTTATCTAC
GTTCTCTCTTCGATTTCCCAGGATTGCAAGCAGCCCAATGAAGAACCAGAGGGTATGGAAACAGTCCGTGCTCTG
AGAGCGAAGGGTGTGCCAGTTTCAACAATTCCAGAGTCCGCGGTGGCATATTCCCTCGGCAAGGCTGATATGGTC
ATTGTGGGTGCGGAGGGCGTGGTTGAGAATGGAGGCATTGTGTCTCGCATGGGAACCTACCAGATCGGTCTCCTC
GCCAAGGCTATTGGGAAGCCATTCTACGTGGTAGCAGAAAGCCATAAGTTTGTTCGCCTGTACCCTCTTGGTCAG
TACGACCTACCAATTGAGCAGCAAGTTCTTGAGTTCAAGTCGGAGGAAGACCTTGAAGAGGAGCGCAAGCAGCAG
TCCTCTGTCACTAAGACAGACGGAGACACCTCAATTAAGCTACCCCTCTGTGACTCGGTTGATTTCACTCCTCCT
CACTTGATCTCTGCACTGATCACAGATAGCGGTGTCTTGACGCCTAGTGCTGTTAGTGAGGAATTGATCAAAATC
TGGTTCTGA
Transcript >Pro_DTO377G3_2|g215.t1
ATGGCTTCTACTACTTCAGATGCGGCTGTAGCCGATACGAAACCATTCGACATTGTCGCAACCTACAATGAACTC
CTCCGCTCCGATGCCGACCTCACTATGCCTATTGCGGCCATTGAAGCTCTGGTTCTTCTTCTCACACAGTCAGCC
TCTTCAACGATATCAGAGACTTTGGATCTACTCGAAAAATCCACCGCCCACCTGAAACGCTCCATTCCCAACCCC
ATCGGTCTATCTGCCGGAACCGATCTTTTCCAACGATACCTGATCACCACACTACAACGCCCTGGGCAACTAGGT
CCCGCGGGCGATTTCAAGGCCATCCGCACACATCTCTTGTCAAACGGACGGCTGTTTATCCGACGCGCCAAGGAA
AGCCGAGACAAAATCGCAGCATTCGGCCGTGGCTTCATTCGCGATGGCAGCACCATCCTTACAAACGGTGGCTCC
CGCGCTGTCGCAGCACTATTGCAAAAAGCCGCAGATGAGGAGGGTGGCCCCGCTGTGCGGTTCCGTGTTATCTAC
GTTCTCTCTTCGATTTCCCAGGATTGCAAGCAGCCCAATGAAGAACCAGAGGGTATGGAAACAGTCCGTGCTCTG
AGAGCGAAGGGTGTGCCAGTTTCAACAATTCCAGAGTCCGCGGTGGCATATTCCCTCGGCAAGGCTGATATGGTC
ATTGTGGGTGCGGAGGGCGTGGTTGAGAATGGAGGCATTGTGTCTCGCATGGGAACCTACCAGATCGGTCTCCTC
GCCAAGGCTATTGGGAAGCCATTCTACGTGGTAGCAGAAAGCCATAAGTTTGTTCGCCTGTACCCTCTTGGTCAG
TACGACCTACCAATTGAGCAGCAAGTTCTTGAGTTCAAGTCGGAGGAAGACCTTGAAGAGGAGCGCAAGCAGCAG
TCCTCTGTCACTAAGACAGACGGAGACACCTCAATTAAGCTACCCCTCTGTGACTCGGTTGATTTCACTCCTCCT
CACTTGATCTCTGCACTGATCACAGATAGCGGTGTCTTGACGCCTAGTGCTGTTAGTGAGGAATTGATCAAAATC
TGGTTCTGA
Gene >Pro_DTO377G3_2|g215.t1
ATGGCTTCTACTACTTCAGATGCGGCTGTAGCCGATACGAAACCATTCGAGTAAGTAAAACGCGCTCCCTCGAAG
CGCTCGCACCTGCTCACTGTTCCTTCAGCATTGTCGCAACCTACAATGAACTCCTCCGCTCCGATGCCGACCTCA
CTATGCCTATTGCGGCCATTGAAGCTCTGGTTCTTCTTCTCACACAGTCAGCCTCTTCAACGATATCAGAGACTT
TGGATCTACTCGAAAAATCCACCGCCCACCTGAAACGCTCCATTCCCAACCCCATCGGTCTATCTGCCGGAACCG
ATCTTTTCCAACGATACCTGATCACCACACTACAACGCCCTGGGCAACTAGGTCCCGCGGGCGATTTCAAGGCCA
TCCGCACACATCTCTTGTCAAACGGACGGCTGTTTATCCGACGCGCCAAGGAAAGCCGAGACAAAATCGCAGCAT
TCGGCCGTGGCTTCATTCGCGATGGCAGCACCATCCTTACAAACGGTGGCTCCCGCGCTGTCGCAGCACTATTGC
AAAAAGCCGCAGATGAGGAGGGTGGCCCCGCTGTGCGGTTCCGTGTTATCTACGTTCTCTCTTCGATTTCCCAGG
ATTGCAAGCAGCCCAATGAAGAACCAGAGGGTATGGAAACAGTCCGTGCTCTGAGAGCGAAGGGTGTGCCAGTTT
CAACAATTCCAGAGTCCGCGGTGGCATATTCCCTCGGCAAGGCTGATATGGTCATTGTGGGTGCGGAGGGCGTGG
TTGAGAATGGAGGCATTGTGTCTCGCATGGGAACCTACCAGATCGGTCTCCTCGCCAAGGCTATTGGGAAGCCAT
TCTACGTGGTAGCAGAAAGCCATAAGTTTGTTCGCCTGTACCCTCTTGGTCAGTACGACCTACCAATTGAGCAGC
AAGTTCTTGAGTTCAAGTCGGAGGAAGACCTTGAAGAGGAGCGCAAGCAGCAGTCCTCTGTCACTAAGACAGACG
GAGACACCTCAATTAAGCTACCCCTCTGTGACTCGGTTGATTTCACTCCTCCTCACTTGATCTCTGCACTGATCA
CAGATAGCGGTGTCTTGACGCCTAGTGCTGTTAGTGAGGAATTGATCAAAATCTGGTTCTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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