© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g2148.t1 |
| Gene name | |
| Location | scaffold_02:1773720..1775467 |
| Strand | - |
| Gene length (bp) | 1747 |
| Transcript length (bp) | 1527 |
| Coding sequence length (bp) | 1527 |
| Protein length (aa) | 509 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 1.2E-97 | 17 | 469 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.5E-27 | 47 | 350 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 9.4E-09 | 291 | 458 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 21 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 13 | 32 | 19 |
| 2 | 52 | 74 | 22 |
| 3 | 79 | 101 | 22 |
| 4 | 111 | 133 | 22 |
| 5 | 145 | 167 | 22 |
| 6 | 182 | 204 | 22 |
| 7 | 302 | 324 | 22 |
| 8 | 331 | 350 | 19 |
| 9 | 370 | 392 | 22 |
| 10 | 432 | 454 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g2148.t1 MTFSMTRKRAYNWYISCVAASCMVLYGYDASVFNSVQGSKNWLAWMNHPNASTIGSINTAYTVGAIFGGFFLGGP CADFLGRKLGMGIGCILVIIATFMQTFAPHHDLACFLAGRCIIGIGQGIALTAGPIYIGELAPPEIRGKIMTFWQ MFYSVGSFICFWINFACTKNVPQLGEWDWRLVVIFQLLVPILILALLPTIPGSPRWYIRRGNNIEKAREALRRVR DTEEEVEQELLEIREAIEYEKEAISSNYSALWKDKSLRKRMGLALVLNAGQQITGQGSLNSYSTKIYQKVFTSDS QIALINALNATFGIFFTLNAVWIVDRFGRKFLLIVGGIGMGLCMIIVSAVETETPQLANGAKSEPVGISIVFLLF LFILFYKPSWGATVWIWTSEIFSMNVRAQAVGMASQTQNIANAIVQQFFPLFLDNEGFYAFYMFAGINFLLAVFV WFLIPETKQVPLEEIDILFGGANHVARGEEVMAHQKGVQMSHEESKQPGAVAVEHTRN* |
| Coding | >Pro_DTO377G3_2|g2148.t1 ATGACTTTTTCAATGACCCGTAAGAGAGCGTACAATTGGTACATCTCTTGCGTTGCAGCATCATGTATGGTACTC TACGGCTACGATGCATCTGTATTCAACTCAGTCCAGGGTTCCAAGAACTGGCTCGCTTGGATGAACCACCCAAAT GCGTCGACAATCGGCTCAATTAATACAGCATACACGGTCGGTGCTATCTTTGGTGGTTTCTTCCTGGGAGGCCCG TGTGCAGACTTCCTGGGCCGCAAACTTGGAATGGGCATTGGCTGTATTTTGGTCATTATTGCCACCTTTATGCAA ACCTTCGCTCCTCACCACGATCTTGCCTGCTTCCTTGCCGGTAGATGCATTATTGGTATTGGCCAGGGTATCGCA TTGACTGCGGGCCCTATCTACATTGGTGAATTGGCTCCGCCAGAGATCCGTGGTAAGATCATGACTTTCTGGCAG ATGTTCTACTCTGTTGGATCGTTCATCTGCTTCTGGATCAACTTTGCCTGCACTAAAAATGTTCCCCAGCTGGGT GAGTGGGACTGGAGATTGGTTGTTATTTTCCAGCTTTTGGTTCCTATTTTGATCCTTGCCCTCCTGCCGACTATC CCCGGTAGCCCTCGTTGGTATATCCGGAGAGGAAACAACATCGAGAAGGCCCGTGAAGCTCTCCGAAGAGTTCGT GATACCGAGGAGGAAGTCGAGCAAGAGCTGCTGGAGATTCGTGAGGCTATCGAATACGAGAAGGAAGCTATCTCT AGCAATTACTCGGCTCTCTGGAAAGACAAGTCTCTCCGCAAGCGCATGGGTCTAGCTCTGGTTCTCAATGCCGGC CAACAGATCACCGGACAAGGCTCACTCAACTCATACTCTACCAAGATCTACCAGAAGGTGTTTACCAGCGACAGT CAGATTGCTCTGATCAACGCTCTGAACGCCACCTTTGGAATTTTCTTCACCCTGAACGCCGTCTGGATTGTTGAT CGATTCGGGAGAAAGTTCCTCTTGATTGTCGGTGGTATCGGCATGGGTCTGTGCATGATCATTGTCTCCGCCGTC GAAACAGAAACACCACAACTTGCCAATGGAGCCAAGTCGGAGCCTGTCGGTATATCGATTGTGTTCCTTCTGTTC TTGTTCATCTTATTCTACAAACCATCTTGGGGCGCAACAGTATGGATCTGGACGTCTGAGATTTTCTCAATGAAC GTTCGCGCACAGGCCGTAGGTATGGCATCGCAGACTCAGAACATCGCCAACGCCATCGTGCAGCAATTCTTCCCT CTTTTCCTCGACAACGAGGGCTTCTATGCCTTCTACATGTTTGCCGGTATTAACTTCCTACTTGCCGTCTTCGTT TGGTTCCTTATTCCGGAGACCAAGCAGGTTCCCCTTGAGGAGATTGATATTCTATTTGGCGGTGCTAACCATGTT GCTCGGGGAGAGGAGGTGATGGCACACCAGAAGGGGGTTCAGATGAGCCACGAAGAAAGCAAGCAGCCTGGTGCT GTTGCTGTTGAGCATACTCGGAACTAG |
| Transcript | >Pro_DTO377G3_2|g2148.t1 ATGACTTTTTCAATGACCCGTAAGAGAGCGTACAATTGGTACATCTCTTGCGTTGCAGCATCATGTATGGTACTC TACGGCTACGATGCATCTGTATTCAACTCAGTCCAGGGTTCCAAGAACTGGCTCGCTTGGATGAACCACCCAAAT GCGTCGACAATCGGCTCAATTAATACAGCATACACGGTCGGTGCTATCTTTGGTGGTTTCTTCCTGGGAGGCCCG TGTGCAGACTTCCTGGGCCGCAAACTTGGAATGGGCATTGGCTGTATTTTGGTCATTATTGCCACCTTTATGCAA ACCTTCGCTCCTCACCACGATCTTGCCTGCTTCCTTGCCGGTAGATGCATTATTGGTATTGGCCAGGGTATCGCA TTGACTGCGGGCCCTATCTACATTGGTGAATTGGCTCCGCCAGAGATCCGTGGTAAGATCATGACTTTCTGGCAG ATGTTCTACTCTGTTGGATCGTTCATCTGCTTCTGGATCAACTTTGCCTGCACTAAAAATGTTCCCCAGCTGGGT GAGTGGGACTGGAGATTGGTTGTTATTTTCCAGCTTTTGGTTCCTATTTTGATCCTTGCCCTCCTGCCGACTATC CCCGGTAGCCCTCGTTGGTATATCCGGAGAGGAAACAACATCGAGAAGGCCCGTGAAGCTCTCCGAAGAGTTCGT GATACCGAGGAGGAAGTCGAGCAAGAGCTGCTGGAGATTCGTGAGGCTATCGAATACGAGAAGGAAGCTATCTCT AGCAATTACTCGGCTCTCTGGAAAGACAAGTCTCTCCGCAAGCGCATGGGTCTAGCTCTGGTTCTCAATGCCGGC CAACAGATCACCGGACAAGGCTCACTCAACTCATACTCTACCAAGATCTACCAGAAGGTGTTTACCAGCGACAGT CAGATTGCTCTGATCAACGCTCTGAACGCCACCTTTGGAATTTTCTTCACCCTGAACGCCGTCTGGATTGTTGAT CGATTCGGGAGAAAGTTCCTCTTGATTGTCGGTGGTATCGGCATGGGTCTGTGCATGATCATTGTCTCCGCCGTC GAAACAGAAACACCACAACTTGCCAATGGAGCCAAGTCGGAGCCTGTCGGTATATCGATTGTGTTCCTTCTGTTC TTGTTCATCTTATTCTACAAACCATCTTGGGGCGCAACAGTATGGATCTGGACGTCTGAGATTTTCTCAATGAAC GTTCGCGCACAGGCCGTAGGTATGGCATCGCAGACTCAGAACATCGCCAACGCCATCGTGCAGCAATTCTTCCCT CTTTTCCTCGACAACGAGGGCTTCTATGCCTTCTACATGTTTGCCGGTATTAACTTCCTACTTGCCGTCTTCGTT TGGTTCCTTATTCCGGAGACCAAGCAGGTTCCCCTTGAGGAGATTGATATTCTATTTGGCGGTGCTAACCATGTT GCTCGGGGAGAGGAGGTGATGGCACACCAGAAGGGGGTTCAGATGAGCCACGAAGAAAGCAAGCAGCCTGGTGCT GTTGCTGTTGAGCATACTCGGAACTAG |
| Gene | >Pro_DTO377G3_2|g2148.t1 ATGACTTTTTCAATGACCCGTAAGAGAGCGTACAATTGGTTGGTGCACAGTCATATAATCCGCCGAACATACCCT AATCTAATTTCCTAGGTACATCTCTTGCGTTGCAGCATCATGTATGGTACTCTACGGCTACGATGCATCTGTATT CAACTCAGTCCAGGGTTCCAAGAACTGGCTCGCTTGGATGAACCACCCAAATGCGTCGACAATCGGCTCAATTAA TACAGCATACACGGTCGGTGCTATCTTTGGTGGTTTCTTCCTGGGAGGCCCGTGTGCAGACTTCCTGGGCCGCAA ACTTGGAATGGGCATTGGCTGTATTTTGGTCATTATTGCCACCTTTATGCAAACCTTCGCTCCTCACCACGATCT TGCCTGCTTCCTTGCCGGTAGATGCATTATTGGTATTGGCCAGGGTATCGCATTGAGTAAGTCTTGTTGATCCTG TGGTTTCAATGACGGGGACTGACAGCTTGTTTTGCAGCTGCGGGCCCTATCTACATTGGTGAATTGGCTCCGCCA GAGATCCGTGGTAAGATCATGACTTTCTGGCAGATGTTCTACTCTGTTGGATCGTTCATCTGCTTCTGGATCAAC TTTGCCTGCACTAAAAATGTTCCCCAGCTGGGTGAGTGGGACTGGAGATTGGTTGTTATTTTCCAGCTTTTGGTT CCTATTTTGATCCTTGCCCTCCTGCCGACTATCCCCGGTAGCCCTCGTTGGTAAGTCCATGTTGGCGATTTCGAT TGGCCCGAGCAATTCTGACCATTACTAGGTATATCCGGAGAGGAAACAACATCGAGAAGGCCCGTGAAGCTCTCC GAAGAGTTCGTGATACCGAGGAGGAAGTCGAGCAAGAGCTGCTGGAGATTCGTGAGGCTATCGAATACGAGAAGG AAGCTATCTCTAGCAATTACTCGGCTCTCTGGAAAGACAAGTCTCTCCGCAAGCGCATGGGTCTAGCTCTGGTTC TCAATGCCGGCCAACAGATCACCGGACAAGGCTCACTCAACTCATACTCTACCAAGATCTACCAGAAGGTGTTTA CCAGCGACAGTCAGATTGCTCTGATCAACGCTCTGAACGCCACCTTTGGAATTTTCTTCACCCTGAACGCCGTCT GGATTGTTGATCGATTCGGGAGAAAGTTCCTCTTGATTGTCGGTGGTATCGGCATGGGTCTGTGCATGATCATTG TCTCCGCCGTCGAAACAGAAACACCACAACTTGCCAATGGAGCCAAGTCGGAGCCTGTCGGTATATCGATTGTGT TCCTTCTGTTCTTGTTCATCTTATTCTGTAAGTTCCTTCTACTTACCATTTCCCAGCAAACGGAACTTCACTAAC ATCATTTTCAGACAAACCATCTTGGGGCGCAACAGTATGGATCTGGACGTCTGAGATTTTCTCAATGAACGTTCG CGCACAGGCCGTAGGTATGGCATCGCAGACTCAGAACATCGCCAACGCCATCGTGCAGCAATTCTTCCCTCTTTT CCTCGACAACGAGGGCTTCTATGCCTTCTACATGTTTGCCGGTATTAACTTCCTACTTGCCGTCTTCGTTTGGTT CCTTATTCCGGAGACCAAGCAGGTTCCCCTTGAGGAGATTGATATTCTATTTGGCGGTGCTAACCATGTTGCTCG GGGAGAGGAGGTGATGGCACACCAGAAGGGGGTTCAGATGAGCCACGAAGAAAGCAAGCAGCCTGGTGCTGTTGC TGTTGAGCATACTCGGAACTAG |