Protein ID | Pro_DTO377G3_2|g214.t1 |
Gene name | |
Location | scaffold_01:556282..557859 |
Strand | - |
Gene length (bp) | 1577 |
Transcript length (bp) | 1410 |
Coding sequence length (bp) | 1410 |
Protein length (aa) | 470 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF03800 | Nuf2 | Nuf2 family | 8.2E-45 | 35 | 175 |
PF18595 | Nuf2_DHR10-like | Nuf2, DHR10-like domain | 2.4E-33 | 287 | 403 |
GO Term | Description | Terminal node |
---|---|---|
GO:0031262 | Ndc80 complex | Yes |
GO:0000776 | kinetochore | Yes |
GO:0043228 | non-membrane-bounded organelle | No |
GO:0032991 | protein-containing complex | No |
GO:0043232 | intracellular non-membrane-bounded organelle | No |
GO:0043226 | organelle | No |
GO:0099080 | supramolecular complex | No |
GO:0110165 | cellular anatomical entity | No |
GO:0043229 | intracellular organelle | No |
GO:0005575 | cellular_component | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 38 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g214.t1 MSRNSTAMGYNSRMSQQFQGNQHHGRGRKKEDENDALMRLPDKEIAGCINDIGIPFTLADLAKPNAQQIQMVFEW FAELLMNTTRETVEPAMHAAAEDLCGDYPDIIPNDTRNLMGFFMMLRKLLAECGVNDFTFTDLTKPTHERLVKIF SYLINFVRFRESQTPVIDEHFNKTEKTKSRIDELLAENQEMELRLREMRQDLQSNEANVREKVSRNDALKARLLE LGREQSRVAETLDRVKTERARRQQQLEEKTERTVRSRQEAEKLRPYVLESPASLQSSLAELSENLMREKASIDAM ERRARALQTSSDTFTVVSNDVQGCVKLLDDISAEMQKEDEEESRAARTAEAISDRGNSVREVEQTEKLLQRQLAR WVERIEALQKNAQEKAELAQARMEELRNVQKQLREERAEKQRDMERRRIRIEQTEKKMVDLKENIETEIQSAHDQ YLKLESHIKLYMTEMEKSL* |
Coding | >Pro_DTO377G3_2|g214.t1 ATGTCGCGCAACTCTACCGCCATGGGATATAACAGCCGTATGAGCCAGCAATTCCAAGGCAACCAGCACCACGGT CGGGGTCGCAAGAAGGAGGACGAAAATGACGCCCTCATGCGCTTGCCCGACAAAGAGATCGCAGGATGTATCAAC GATATCGGTATACCGTTTACCCTCGCCGACCTGGCTAAACCAAACGCCCAACAAATCCAGATGGTGTTCGAATGG TTCGCGGAACTGCTCATGAATACGACTCGAGAGACAGTGGAACCCGCAATGCATGCAGCTGCAGAAGATCTATGC GGCGACTACCCTGATATAATTCCCAATGACACTCGCAACCTCATGGGTTTCTTTATGATGCTGCGAAAGCTATTG GCGGAGTGCGGTGTCAACGACTTCACCTTCACAGACCTGACCAAACCGACGCATGAACGACTCGTCAAAATATTC TCGTACTTGATTAACTTTGTTCGATTCCGGGAATCGCAAACACCTGTGATCGACGAGCACTTTAACAAGACAGAA AAAACGAAATCGCGCATAGACGAACTTCTGGCGGAAAATCAGGAGATGGAATTAAGGCTGAGGGAAATGCGGCAG GATCTCCAATCCAATGAAGCGAATGTGAGAGAGAAAGTTTCCCGAAACGATGCGCTTAAGGCGCGGCTATTGGAA CTGGGTCGGGAGCAGTCGCGAGTCGCAGAAACACTTGATCGAGTTAAGACGGAAAGAGCTCGGCGGCAGCAGCAA TTGGAAGAGAAAACCGAACGAACCGTCCGTTCTCGACAAGAAGCGGAGAAACTGCGGCCTTATGTGCTCGAGTCT CCGGCCAGCCTCCAGTCCTCACTGGCTGAACTATCCGAGAATCTGATGCGCGAAAAGGCCTCCATTGATGCGATG GAGAGGCGAGCACGCGCACTGCAGACCTCTTCGGATACGTTCACCGTGGTTTCCAATGATGTGCAGGGATGTGTT AAATTGCTCGATGACATTTCAGCTGAGATGCAAAAAGAGGATGAAGAGGAGTCTCGTGCTGCTAGAACTGCAGAG GCTATTTCGGACAGGGGGAACAGCGTCCGCGAGGTCGAGCAGACCGAGAAGCTCTTGCAGCGTCAACTGGCCCGT TGGGTCGAGCGCATCGAGGCACTTCAGAAAAATGCACAGGAGAAAGCCGAACTTGCGCAGGCACGCATGGAAGAA CTCCGAAATGTGCAAAAACAGCTCCGCGAGGAGCGTGCGGAGAAGCAGCGCGATATGGAGCGGAGGCGTATTCGC ATTGAACAGACAGAGAAGAAGATGGTTGACTTGAAGGAGAACATTGAGACCGAGATTCAGTCAGCCCACGATCAG TACCTAAAGTTAGAGTCACATATCAAGCTGTACATGACAGAGATGGAGAAGTCTCTATGA |
Transcript | >Pro_DTO377G3_2|g214.t1 ATGTCGCGCAACTCTACCGCCATGGGATATAACAGCCGTATGAGCCAGCAATTCCAAGGCAACCAGCACCACGGT CGGGGTCGCAAGAAGGAGGACGAAAATGACGCCCTCATGCGCTTGCCCGACAAAGAGATCGCAGGATGTATCAAC GATATCGGTATACCGTTTACCCTCGCCGACCTGGCTAAACCAAACGCCCAACAAATCCAGATGGTGTTCGAATGG TTCGCGGAACTGCTCATGAATACGACTCGAGAGACAGTGGAACCCGCAATGCATGCAGCTGCAGAAGATCTATGC GGCGACTACCCTGATATAATTCCCAATGACACTCGCAACCTCATGGGTTTCTTTATGATGCTGCGAAAGCTATTG GCGGAGTGCGGTGTCAACGACTTCACCTTCACAGACCTGACCAAACCGACGCATGAACGACTCGTCAAAATATTC TCGTACTTGATTAACTTTGTTCGATTCCGGGAATCGCAAACACCTGTGATCGACGAGCACTTTAACAAGACAGAA AAAACGAAATCGCGCATAGACGAACTTCTGGCGGAAAATCAGGAGATGGAATTAAGGCTGAGGGAAATGCGGCAG GATCTCCAATCCAATGAAGCGAATGTGAGAGAGAAAGTTTCCCGAAACGATGCGCTTAAGGCGCGGCTATTGGAA CTGGGTCGGGAGCAGTCGCGAGTCGCAGAAACACTTGATCGAGTTAAGACGGAAAGAGCTCGGCGGCAGCAGCAA TTGGAAGAGAAAACCGAACGAACCGTCCGTTCTCGACAAGAAGCGGAGAAACTGCGGCCTTATGTGCTCGAGTCT CCGGCCAGCCTCCAGTCCTCACTGGCTGAACTATCCGAGAATCTGATGCGCGAAAAGGCCTCCATTGATGCGATG GAGAGGCGAGCACGCGCACTGCAGACCTCTTCGGATACGTTCACCGTGGTTTCCAATGATGTGCAGGGATGTGTT AAATTGCTCGATGACATTTCAGCTGAGATGCAAAAAGAGGATGAAGAGGAGTCTCGTGCTGCTAGAACTGCAGAG GCTATTTCGGACAGGGGGAACAGCGTCCGCGAGGTCGAGCAGACCGAGAAGCTCTTGCAGCGTCAACTGGCCCGT TGGGTCGAGCGCATCGAGGCACTTCAGAAAAATGCACAGGAGAAAGCCGAACTTGCGCAGGCACGCATGGAAGAA CTCCGAAATGTGCAAAAACAGCTCCGCGAGGAGCGTGCGGAGAAGCAGCGCGATATGGAGCGGAGGCGTATTCGC ATTGAACAGACAGAGAAGAAGATGGTTGACTTGAAGGAGAACATTGAGACCGAGATTCAGTCAGCCCACGATCAG TACCTAAAGTTAGAGTCACATATCAAGCTGTACATGACAGAGATGGAGAAGTCTCTATGA |
Gene | >Pro_DTO377G3_2|g214.t1 ATGTCGCGCAACTCTACCGCCATGGGATATAACAGCCGTATGAGCCAGCAATTCCAAGGCAACCAGCACCACGGT CGGGGTCGCAAGAAGGAGGACGAAAATGACGCCCTCATGCGCTTGGTGAGCTTGATTTTTGCCGGAGCTTTCGTC TGATACTAACATGAAATAGCCCGACAAAGAGATCGCAGGATGTATCAACGATATCGGTATACCGTTTACCCTCGC CGACCTGGCTAAACCAAACGCCCAACAAATCCAGATGGTGTTCGAATGGTTCGCGGAACTGCTCATGAATACGAC TCGAGAGACAGTGGAACCCGCAATGCATGCAGCTGCAGAAGATCTATGCGGCGACTACCCTGATATAATTCCCAA TGACACTCGCAACCTCATGGGTTTCTTTATGATGCTGCGAAAGCTATTGGCGGAGGTATCTGCTCATCACTAGCT ACAAAAGCCCCGAAGAGTATGCTAATGCCTATAGTACAAAACAGTGCGGTGTCAACGACTTCACCTTCACAGACC TGACCAAACCGACGCATGAACGACTCGTCAAAATATTCTCGTACTTGATTAACTTTGTTCGATTCCGGGAATCGC AAACACCTGTGATCGACGAGCACTTTAACAAGACAGAAAAAACGAAATCGCGCATAGACGAACTTCTGGCGGAAA ATCAGGAGATGGAATTAAGGCTGAGGGAAATGCGGCAGGATCTCCAATCCAATGAAGCGAATGTGAGAGAGAAAG TTTCCCGAAACGATGCGCTTAAGGCGCGGCTATTGGAACTGGGTCGGGAGCAGTCGCGAGTCGCAGAAACACTTG ATCGAGTTAAGACGGAAAGAGCTCGGCGGCAGCAGCAATTGGAAGAGAAAACCGAACGAACCGTCCGTTCTCGAC AAGAAGCGGAGAAACTGCGGCCTTATGTGCTCGAGTCTCCGGCCAGCCTCCAGTCCTCACTGGCTGAACTATCCG AGAATCTGATGCGCGAAAAGGCCTCCATTGATGCGATGGAGAGGCGAGCACGCGCACTGCAGACCTCTTCGGATA CGTTCACCGTGGTTTCCAATGATGTGCAGGGATGTGTTAAATTGCTCGATGACATTTCAGCTGAGATGCAAAAAG AGGATGAAGAGGAGTCTCGTGCTGCTAGAACTGCAGAGGCTATTTCGGACAGGGGGAACAGCGTCCGCGAGGTCG AGCAGACCGAGAAGCTCTTGCAGCGTCAACTGGCCCGTTGGGTCGAGCGCATCGAGGCACTTCAGAAAAATGCAC AGGAGAAAGCCGAACTTGCGCAGGCACGCATGGAAGAACTCCGAAATGTGCAAAAACAGCTCCGCGAGGAGCGTG CGGAGAAGCAGCGCGATATGGAGCGGAGGCGTATTCGCATTGAACAGACAGAGAAGAAGGTACGTCTTACCCTGT GTCGTGGGTGATGAACTATTGCTAACCCACTCTTCTAGATGGTTGACTTGAAGGAGAACATTGAGACCGAGATTC AGTCAGCCCACGATCAGTACCTAAAGTTAGAGTCACATATCAAGCTGTACATGACAGAGATGGAGAAGTCTCTAT GA |