Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2128.t1
Gene name
Locationscaffold_02:1729323..1730085
Strand-
Gene length (bp)762
Transcript length (bp)762
Coding sequence length (bp)762
Protein length (aa) 254

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00230 MIP Major intrinsic protein 1.4E-25 28 247

GO

GO Term Description Terminal node
GO:0016020 membrane Yes
GO:0055085 transmembrane transport Yes
GO:0015267 channel activity Yes
GO:0008150 biological_process No
GO:0022803 passive transmembrane transporter activity No
GO:0006810 transport No
GO:0009987 cellular process No
GO:0051234 establishment of localization No
GO:0110165 cellular anatomical entity No
GO:0022857 transmembrane transporter activity No
GO:0005215 transporter activity No
GO:0003674 molecular_function No
GO:0005575 cellular_component No
GO:0051179 localization No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 27 0.5

Transmembrane Domains

Domain # Start End Length
1 13 35 22
2 55 77 22
3 98 120 22
4 145 167 22
5 179 201 22
6 229 251 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2128.t1
MPVSLHISNRTRSVIHGILFEYVVEAAAVFIQLAIGFCANIAAVTNKSHPDTSWIWGSATMIATYLSGNVSCAHL
NSSITIMLWFYRGFPKRKVPRYLGAQFLGAFLAAIAAYSLCYQSIERYLTTSSENLIVSSFVAVQYAVGIGPATV
FITEFMGALFLAVMVLAVDDKSPSTGMRSIIFGLVVVCLHAAFASQTEAVFNPSRDLGTRLALLALGYDSDLFRN
VTCLCWSYLGSISGALIGGLLYDLVFVL*
Coding >Pro_DTO377G3_2|g2128.t1
ATGCCTGTAAGCCTCCACATCAGCAACAGGACACGCTCCGTGATCCATGGAATCCTTTTCGAATATGTTGTCGAG
GCGGCAGCTGTCTTCATTCAGCTCGCAATTGGCTTTTGTGCAAATATCGCCGCTGTCACCAACAAGTCCCACCCC
GACACTAGTTGGATCTGGGGGTCTGCGACCATGATCGCTACTTATTTGTCTGGCAATGTATCTTGCGCCCACCTC
AACTCATCTATCACTATTATGCTTTGGTTCTACCGCGGCTTCCCTAAACGAAAAGTCCCCAGATACTTGGGCGCT
CAGTTTCTAGGGGCTTTCTTAGCTGCCATTGCTGCGTATAGCCTCTGCTACCAATCCATCGAGCGTTACCTCACT
ACGAGCTCGGAAAATCTGATAGTGTCCAGTTTCGTGGCCGTTCAATATGCAGTGGGGATCGGGCCTGCGACCGTG
TTTATAACCGAGTTCATGGGAGCTCTTTTCCTGGCTGTCATGGTTCTAGCCGTTGACGACAAGAGTCCTAGCACC
GGTATGAGATCAATCATTTTTGGCCTTGTGGTCGTGTGTCTTCACGCTGCCTTCGCCTCCCAAACTGAAGCTGTG
TTCAATCCAAGCCGAGACCTCGGGACCCGGCTTGCCTTATTGGCACTAGGCTACGACAGTGACTTGTTTCGGAAT
GTCACTTGCCTCTGCTGGTCTTATCTGGGATCAATTAGCGGTGCCTTGATTGGAGGTCTGCTGTACGACTTGGTC
TTTGTTCTATGA
Transcript >Pro_DTO377G3_2|g2128.t1
ATGCCTGTAAGCCTCCACATCAGCAACAGGACACGCTCCGTGATCCATGGAATCCTTTTCGAATATGTTGTCGAG
GCGGCAGCTGTCTTCATTCAGCTCGCAATTGGCTTTTGTGCAAATATCGCCGCTGTCACCAACAAGTCCCACCCC
GACACTAGTTGGATCTGGGGGTCTGCGACCATGATCGCTACTTATTTGTCTGGCAATGTATCTTGCGCCCACCTC
AACTCATCTATCACTATTATGCTTTGGTTCTACCGCGGCTTCCCTAAACGAAAAGTCCCCAGATACTTGGGCGCT
CAGTTTCTAGGGGCTTTCTTAGCTGCCATTGCTGCGTATAGCCTCTGCTACCAATCCATCGAGCGTTACCTCACT
ACGAGCTCGGAAAATCTGATAGTGTCCAGTTTCGTGGCCGTTCAATATGCAGTGGGGATCGGGCCTGCGACCGTG
TTTATAACCGAGTTCATGGGAGCTCTTTTCCTGGCTGTCATGGTTCTAGCCGTTGACGACAAGAGTCCTAGCACC
GGTATGAGATCAATCATTTTTGGCCTTGTGGTCGTGTGTCTTCACGCTGCCTTCGCCTCCCAAACTGAAGCTGTG
TTCAATCCAAGCCGAGACCTCGGGACCCGGCTTGCCTTATTGGCACTAGGCTACGACAGTGACTTGTTTCGGAAT
GTCACTTGCCTCTGCTGGTCTTATCTGGGATCAATTAGCGGTGCCTTGATTGGAGGTCTGCTGTACGACTTGGTC
TTTGTTCTATGA
Gene >Pro_DTO377G3_2|g2128.t1
ATGCCTGTAAGCCTCCACATCAGCAACAGGACACGCTCCGTGATCCATGGAATCCTTTTCGAATATGTTGTCGAG
GCGGCAGCTGTCTTCATTCAGCTCGCAATTGGCTTTTGTGCAAATATCGCCGCTGTCACCAACAAGTCCCACCCC
GACACTAGTTGGATCTGGGGGTCTGCGACCATGATCGCTACTTATTTGTCTGGCAATGTATCTTGCGCCCACCTC
AACTCATCTATCACTATTATGCTTTGGTTCTACCGCGGCTTCCCTAAACGAAAAGTCCCCAGATACTTGGGCGCT
CAGTTTCTAGGGGCTTTCTTAGCTGCCATTGCTGCGTATAGCCTCTGCTACCAATCCATCGAGCGTTACCTCACT
ACGAGCTCGGAAAATCTGATAGTGTCCAGTTTCGTGGCCGTTCAATATGCAGTGGGGATCGGGCCTGCGACCGTG
TTTATAACCGAGTTCATGGGAGCTCTTTTCCTGGCTGTCATGGTTCTAGCCGTTGACGACAAGAGTCCTAGCACC
GGTATGAGATCAATCATTTTTGGCCTTGTGGTCGTGTGTCTTCACGCTGCCTTCGCCTCCCAAACTGAAGCTGTG
TTCAATCCAAGCCGAGACCTCGGGACCCGGCTTGCCTTATTGGCACTAGGCTACGACAGTGACTTGTTTCGGAAT
GTCACTTGCCTCTGCTGGTCTTATCTGGGATCAATTAGCGGTGCCTTGATTGGAGGTCTGCTGTACGACTTGGTC
TTTGTTCTATGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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