Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2102.t1
Gene name
Locationscaffold_02:1664866..1666408
Strand-
Gene length (bp)1542
Transcript length (bp)1155
Coding sequence length (bp)1155
Protein length (aa) 385

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00180 Iso_dh Isocitrate/isopropylmalate dehydrogenase 1.8E-102 56 377

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 25 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2102.t1
MIATRNFSVARQCMRSSRVTPRFAAPIAQIRFYASPAQEAVAKFKGQKGPDGKYIVTLIEGDGIGPEISQSIKDI
FEAAKAPIKWESVDVTPILKDGKTAIPDEAVASVRRNYVALKGPLATPVGKGHISLNLTLRRTFNLFANLRPCRS
IAGYKTPYDNVDTVLIRENTEGEYSGIEHVVVDGVVQSIKLITREASERVLRFAFQYAQSINKKKVRVVHKATIM
KMSDGLFLNTAREIAKEFPDIEFDAELLDNTCLRIVTDPTPYNDKVLVMPNLYGDILSDMCAGLIGGLGLTPSGN
IGDECSIFEAVHGSAPDIAGKGLANPTAMLLSSVMMLQHMGLSDHANRIQKAIFDTLAEGKTLTGDLGGKAKTQE
YAGAIIKRL*
Coding >Pro_DTO377G3_2|g2102.t1
ATGATTGCCACCAGAAACTTCTCTGTCGCTCGCCAGTGCATGCGCTCGTCCCGCGTGACACCCCGATTTGCTGCT
CCTATCGCGCAGATTCGGTTCTACGCCAGCCCTGCACAGGAGGCTGTTGCCAAGTTTAAGGGTCAGAAAGGTCCT
GATGGCAAATACATTGTTACTCTGATTGAGGGTGACGGTATTGGTCCTGAGATCTCTCAGTCCATTAAGGACATC
TTCGAGGCTGCCAAGGCCCCCATCAAGTGGGAATCCGTTGATGTCACCCCCATCTTGAAGGATGGCAAGACCGCC
ATTCCCGACGAAGCCGTCGCTAGTGTGCGCCGTAACTACGTCGCCCTCAAGGGTCCTCTCGCTACCCCCGTTGGC
AAGGGTCACATCTCTCTGAACTTGACTCTCCGCCGTACTTTCAACCTGTTCGCCAATCTGCGTCCTTGCCGCTCC
ATTGCTGGCTACAAGACCCCATACGACAACGTCGACACCGTTCTCATCCGTGAGAACACCGAGGGTGAATACTCC
GGTATTGAGCACGTTGTCGTCGACGGTGTCGTGCAGAGCATCAAGCTCATCACCCGCGAGGCTTCCGAGCGTGTC
CTCCGTTTTGCCTTCCAGTACGCGCAGTCCATCAACAAGAAGAAGGTCCGCGTTGTCCACAAGGCCACCATCATG
AAGATGTCCGACGGTCTGTTCCTCAACACCGCTCGTGAGATCGCTAAGGAATTCCCCGACATCGAGTTCGACGCT
GAGCTGCTGGACAACACATGCCTGCGTATCGTCACTGACCCTACCCCCTACAACGACAAGGTCCTCGTTATGCCC
AACCTGTACGGTGACATTTTGTCCGACATGTGCGCCGGTCTGATCGGTGGTCTCGGTCTCACCCCCTCCGGTAAC
ATTGGTGACGAGTGCTCCATCTTCGAGGCCGTCCACGGCTCCGCCCCCGATATTGCCGGCAAGGGCCTCGCCAAC
CCCACTGCTATGCTTCTGAGCAGTGTCATGATGCTGCAGCACATGGGTCTCTCCGACCACGCTAACCGCATCCAG
AAGGCTATCTTCGACACTCTCGCCGAGGGCAAGACCCTCACCGGTGACCTTGGAGGTAAGGCCAAGACCCAGGAG
TATGCTGGGGCTATCATCAAGCGCCTGTAA
Transcript >Pro_DTO377G3_2|g2102.t1
ATGATTGCCACCAGAAACTTCTCTGTCGCTCGCCAGTGCATGCGCTCGTCCCGCGTGACACCCCGATTTGCTGCT
CCTATCGCGCAGATTCGGTTCTACGCCAGCCCTGCACAGGAGGCTGTTGCCAAGTTTAAGGGTCAGAAAGGTCCT
GATGGCAAATACATTGTTACTCTGATTGAGGGTGACGGTATTGGTCCTGAGATCTCTCAGTCCATTAAGGACATC
TTCGAGGCTGCCAAGGCCCCCATCAAGTGGGAATCCGTTGATGTCACCCCCATCTTGAAGGATGGCAAGACCGCC
ATTCCCGACGAAGCCGTCGCTAGTGTGCGCCGTAACTACGTCGCCCTCAAGGGTCCTCTCGCTACCCCCGTTGGC
AAGGGTCACATCTCTCTGAACTTGACTCTCCGCCGTACTTTCAACCTGTTCGCCAATCTGCGTCCTTGCCGCTCC
ATTGCTGGCTACAAGACCCCATACGACAACGTCGACACCGTTCTCATCCGTGAGAACACCGAGGGTGAATACTCC
GGTATTGAGCACGTTGTCGTCGACGGTGTCGTGCAGAGCATCAAGCTCATCACCCGCGAGGCTTCCGAGCGTGTC
CTCCGTTTTGCCTTCCAGTACGCGCAGTCCATCAACAAGAAGAAGGTCCGCGTTGTCCACAAGGCCACCATCATG
AAGATGTCCGACGGTCTGTTCCTCAACACCGCTCGTGAGATCGCTAAGGAATTCCCCGACATCGAGTTCGACGCT
GAGCTGCTGGACAACACATGCCTGCGTATCGTCACTGACCCTACCCCCTACAACGACAAGGTCCTCGTTATGCCC
AACCTGTACGGTGACATTTTGTCCGACATGTGCGCCGGTCTGATCGGTGGTCTCGGTCTCACCCCCTCCGGTAAC
ATTGGTGACGAGTGCTCCATCTTCGAGGCCGTCCACGGCTCCGCCCCCGATATTGCCGGCAAGGGCCTCGCCAAC
CCCACTGCTATGCTTCTGAGCAGTGTCATGATGCTGCAGCACATGGGTCTCTCCGACCACGCTAACCGCATCCAG
AAGGCTATCTTCGACACTCTCGCCGAGGGCAAGACCCTCACCGGTGACCTTGGAGGTAAGGCCAAGACCCAGGAG
TATGCTGGGGCTATCATCAAGCGCCTGTAA
Gene >Pro_DTO377G3_2|g2102.t1
ATGATTGCCACCAGAAACTTCTCTGTCGCTCGCCAGTGCATGCGCTCGTCCCGCGTGACACCCCGATTTGCTGCT
CCTATCGCGCAGGTACCAACCCCTCAGGACACTCAGTAGCTAACTATTCAGAGCTCAATTGACTAACTCTCGAGC
TTTTGAATAGATTCGGTTCTACGCCAGCCCTGCACAGGAGGCTGTTGCCAAGTTTAAGGGTCAGAAAGGTCCTGA
TGTATGTTCCTTCCAACCGAGCCCGGTTATCCATCTATGCCGGTGCCAGCCGCGCAGCGCACAGCGACCATAATT
CGAGAACATCACCACGTATATTCTCAACGGCAATGCTAATTGATCTGCTATTTCTAATAGGGCAAATACATTGTT
ACTCTGATTGAGGGTGACGGTATTGGTCCTGAGATCTCTCAGTCCATTAAGGACATCTTCGAGGCTGCCAAGGTA
TGAGCATGTTAACTCTCTAACGTGATCGAAATACTAAGTCAATAACAGGCCCCCATCAAGTGGGAATCCGTTGAT
GTCACCCCCATCTTGAAGGATGGCAAGACCGCCATTCCCGACGAAGCCGTCGCTAGTGTGCGCCGTAACTACGTC
GCCCTCAAGGGTCCTCTCGCTGTATGTTCTAGCTTCCAATTTCCCATATATATCTTGCATCTGGATTATGATACT
AACCTTTGCCTTTCTAGACCCCCGTTGGCAAGGGTCACATCTCTCTGAACTTGACTCTCCGCCGTACTTTCAACC
TGTTCGCCAATCTGCGTCCTTGCCGCTCCATTGCTGGCTACAAGACCCCATACGACAACGTCGACACCGTTCTCA
TCCGTGAGAACACCGAGGGTGAATACTCCGGTATTGAGCACGTTGTCGTCGACGGTGTCGTGCAGAGCATCAAGC
TCATCACCCGCGAGGCTTCCGAGCGTGTCCTCCGTTTTGCCTTCCAGTACGCGCAGTCCATCAACAAGAAGAAGG
TCCGCGTTGTCCACAAGGCCACCATCATGAAGATGTCCGACGGTCTGTTCCTCAACACCGCTCGTGAGATCGCTA
AGGAATTCCCCGACATCGAGTTCGACGCTGAGCTGCTGGACAACACATGCCTGCGTATCGTCACTGACCCTACCC
CCTACAACGACAAGGTCCTCGTTATGCCCAACCTGTACGGTGACATTTTGTCCGACATGTGCGCCGGTCTGATCG
GTGGTCTCGGTCTCACCCCCTCCGGTAACATTGGTGACGAGTGCTCCATCTTCGAGGCCGTCCACGGCTCCGCCC
CCGATATTGCCGGCAAGGGCCTCGCCAACCCCACTGCTATGCTTCTGAGCAGTGTCATGATGCTGCAGCACATGG
GTCTCTCCGACCACGCTAACCGCATCCAGAAGGCTATCTTCGACACTCTCGCCGAGGGCAAGGTGAGTTTTTGCA
TTTATTCCTACAGATACCGCGCATTACTGACCCCATGACCTTTAGACCCTCACCGGTGACCTTGGAGGTAAGGCC
AAGACCCAGGAGTATGCTGGGGCTATCATCAAGCGCCTGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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