Protein ID | Pro_DTO377G3_2|g2100.t1 |
Gene name | |
Location | scaffold_02:1660400..1663317 |
Strand | - |
Gene length (bp) | 2917 |
Transcript length (bp) | 2862 |
Coding sequence length (bp) | 2862 |
Protein length (aa) | 954 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF04130 | GCP_C_terminal | Gamma tubulin complex component C-terminal | 1.8E-66 | 590 | 953 |
PF17681 | GCP_N_terminal | Gamma tubulin complex component N-terminal | 1.8E-57 | 174 | 586 |
GO Term | Description | Terminal node |
---|---|---|
GO:0043015 | gamma-tubulin binding | Yes |
GO:0005515 | protein binding | No |
GO:0008092 | cytoskeletal protein binding | No |
GO:0005488 | binding | No |
GO:0015631 | tubulin binding | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g2100.t1 MDYDHELDPFSSESLWRLSKFSIEALQPLGSLPWNTTLSGDTTSCFEIYPQPEDKIDPVWKLDLFPTGLEKPESV TDSSINPSIDSESDTTCDSLRDISGDNNDIWSLDLLQEEPGQIPPQKSWERYQHKSFQEPVSAYFSESGAQGFDA ALVQRNMVKKDGAPTRIVRTDVFIRSLLRLGLGWSSAFFRYDQRTNQFERCLKDNIRVSGISLMALENVIENVVQ CGTNMQRLRLFAQDPPANYRELSTFFTLTSTVEIIIFNLEQQISDHSKNIASLLQIKALFHRCGDVVGVLAAIVG AAQRAVSDAQVISIVVERAAFFAQKFGWIENLVHEIVIRVTQPWFGFIETWIGLRSEDAALKEYMTNDKSFVRLE TYDRGKFKTGPARIDYIYQAEHMPSFIPADQARSIFECGRSLQLLKRSHPRHPIARRDVLSRIGGLHLHCATTWA GIEQIQTKAQEYESRLRAEIKKYHQGDAGLQDSSSNVVTQTVDQTANTEVTTTAFQLFDIDDEKNDSGPVTDYKA LSKDGLKRLLDKARGFEAEDTNERSYLGPELTYGLHLSLAPILSSQALLIDYSCLHLLFKEHRIRHHLNMQWRFQ LLGEGSFVARLSNSLFDPEMESGERRAGKVRSGVDTGLRLGSRDTWPPASSELRLVLIGLLGDCYFGGTNTEDDE KTHAQKDKELPGGLSFGIRELTDEEIEGCKNPNAIEALDFLRLQYTPPEVLESLITARSLNKYDCLFKHLLRLIR MASAVKRLIRDSTARGSLSGDTHNVYQKFRMDAQHFVLAVSDYCFHIGIGSIWQRFQDTLTKIEHCLNRGDIDGT IEAAHSVPRLRDYHEDILDQMLFALFLSKRHAQAAKLLESIFGTILSFGLLSRADGIGMRNESEGAVLHLYQSFR KQTSAFVNYLRSMESGKATSKSMAKSGEFFSSRTDPTSVFEHLRVRLDVKNYY* |
Coding | >Pro_DTO377G3_2|g2100.t1 ATGGACTATGATCATGAGCTGGATCCTTTCTCGAGTGAAAGCCTCTGGAGACTCTCCAAATTCAGCATAGAAGCT CTGCAGCCATTGGGATCGTTACCATGGAACACTACTCTAAGTGGTGATACTACATCTTGTTTTGAGATATACCCA CAGCCTGAAGACAAGATCGACCCTGTATGGAAGCTGGATCTCTTTCCAACCGGCTTGGAGAAACCAGAATCAGTT ACCGACTCGAGCATCAATCCCTCCATAGACAGCGAGTCTGACACAACATGTGATTCTTTAAGAGACATATCAGGC GACAACAACGATATCTGGTCTTTGGATTTACTTCAGGAAGAACCTGGTCAAATACCCCCGCAGAAATCGTGGGAG AGGTATCAACATAAGTCTTTCCAAGAGCCTGTGTCAGCCTATTTTAGCGAATCTGGAGCACAGGGCTTCGATGCA GCCTTGGTACAACGAAACATGGTAAAGAAAGACGGTGCGCCTACTCGAATTGTTCGAACAGATGTGTTCATTCGA TCACTACTTCGTCTTGGGCTTGGCTGGAGCTCTGCATTCTTTCGCTACGATCAACGAACCAACCAATTTGAAAGA TGTTTGAAGGATAATATCCGAGTCTCTGGTATTAGCCTGATGGCCTTGGAAAATGTGATCGAAAATGTGGTACAA TGCGGTACCAACATGCAGCGCCTGCGGTTATTTGCCCAAGACCCGCCAGCCAACTACAGAGAACTTTCTACGTTT TTCACATTAACTAGCACGGTTGAGATAATAATCTTTAACCTGGAACAACAGATCTCCGATCATTCAAAAAATATT GCTTCACTTCTACAAATAAAGGCACTATTTCACCGCTGCGGGGACGTGGTAGGCGTCCTGGCAGCTATTGTTGGC GCTGCACAAAGGGCTGTCTCGGACGCACAAGTCATATCAATTGTCGTGGAACGTGCAGCTTTTTTTGCCCAGAAG TTTGGCTGGATCGAGAACCTTGTGCATGAGATTGTGATTCGAGTGACTCAGCCATGGTTCGGATTCATCGAGACT TGGATTGGGCTTAGATCCGAAGACGCAGCTCTCAAAGAATATATGACAAACGACAAAAGCTTCGTCCGACTGGAA ACTTATGACCGTGGCAAGTTCAAGACTGGGCCAGCGCGAATTGACTATATCTACCAAGCGGAGCACATGCCGTCT TTCATCCCGGCCGACCAAGCCCGTTCTATCTTTGAGTGTGGGCGAAGTCTTCAACTATTGAAACGATCCCATCCT CGTCATCCTATCGCACGGCGCGATGTTCTCTCACGAATCGGTGGTCTCCATCTGCATTGTGCGACCACCTGGGCT GGCATTGAGCAAATTCAAACAAAAGCCCAGGAATACGAGTCAAGACTCCGCGCTGAGATCAAGAAATATCATCAG GGGGATGCAGGCTTGCAGGATTCATCATCAAATGTGGTCACCCAGACCGTCGATCAAACTGCCAACACAGAGGTT ACAACGACAGCCTTTCAACTCTTCGATATCGACGATGAAAAAAATGATTCAGGACCAGTGACGGATTACAAGGCT CTTTCGAAAGATGGCCTCAAGCGACTGCTCGATAAAGCCCGGGGATTTGAAGCCGAAGATACCAATGAAAGAAGC TATCTTGGTCCTGAGTTGACATATGGCCTCCATTTATCCCTTGCTCCCATTCTTTCGTCACAGGCACTTCTCATC GACTACTCTTGCCTGCACCTTCTCTTCAAAGAGCATCGAATTCGCCATCATCTGAACATGCAATGGCGTTTCCAG TTGCTGGGAGAGGGCTCGTTTGTCGCTCGTCTTTCTAATTCACTGTTCGACCCGGAAATGGAAAGTGGAGAGCGA AGGGCTGGAAAAGTGCGCAGTGGTGTCGACACCGGTCTACGCCTCGGCAGTCGTGACACATGGCCGCCAGCTAGT TCAGAGTTGCGACTCGTCTTAATTGGTCTGCTCGGAGATTGTTACTTTGGTGGCACAAATACAGAAGATGACGAA AAAACGCACGCCCAGAAGGACAAGGAATTGCCTGGTGGCCTGAGCTTCGGAATTCGAGAATTGACAGACGAAGAA ATTGAAGGATGTAAAAATCCGAATGCAATAGAGGCTTTGGACTTCCTTCGTCTGCAGTACACACCACCAGAAGTT CTTGAATCTCTCATTACTGCTCGCTCTTTGAATAAGTATGATTGTCTGTTCAAGCATTTGCTCCGGTTAATCCGC ATGGCTTCTGCCGTTAAACGACTTATCCGGGATTCTACTGCCCGAGGATCTCTATCAGGAGACACACACAATGTG TACCAGAAGTTCAGAATGGATGCCCAGCACTTTGTGCTAGCGGTAAGTGATTACTGCTTCCATATTGGAATTGGG TCCATCTGGCAGCGCTTTCAAGACACACTTACCAAAATCGAGCACTGCCTCAACCGCGGTGACATCGACGGTACG ATTGAAGCGGCTCACTCGGTACCACGACTTCGCGACTATCACGAAGATATCCTTGACCAGATGTTGTTCGCATTA TTCCTCAGTAAGCGCCATGCGCAGGCTGCCAAACTGCTCGAGTCAATTTTCGGCACTATTCTCAGTTTCGGCCTT CTCTCAAGGGCAGATGGAATTGGGATGCGCAACGAAAGCGAAGGGGCTGTTCTCCACCTGTATCAGTCTTTCAGA AAACAGACCTCCGCCTTTGTCAATTACCTTCGCAGCATGGAGTCCGGAAAAGCCACTTCGAAATCAATGGCTAAA TCAGGGGAATTCTTCTCTTCGCGGACAGACCCAACCAGCGTTTTTGAGCATCTACGAGTGAGATTAGACGTCAAG AACTATTATTGA |
Transcript | >Pro_DTO377G3_2|g2100.t1 ATGGACTATGATCATGAGCTGGATCCTTTCTCGAGTGAAAGCCTCTGGAGACTCTCCAAATTCAGCATAGAAGCT CTGCAGCCATTGGGATCGTTACCATGGAACACTACTCTAAGTGGTGATACTACATCTTGTTTTGAGATATACCCA CAGCCTGAAGACAAGATCGACCCTGTATGGAAGCTGGATCTCTTTCCAACCGGCTTGGAGAAACCAGAATCAGTT ACCGACTCGAGCATCAATCCCTCCATAGACAGCGAGTCTGACACAACATGTGATTCTTTAAGAGACATATCAGGC GACAACAACGATATCTGGTCTTTGGATTTACTTCAGGAAGAACCTGGTCAAATACCCCCGCAGAAATCGTGGGAG AGGTATCAACATAAGTCTTTCCAAGAGCCTGTGTCAGCCTATTTTAGCGAATCTGGAGCACAGGGCTTCGATGCA GCCTTGGTACAACGAAACATGGTAAAGAAAGACGGTGCGCCTACTCGAATTGTTCGAACAGATGTGTTCATTCGA TCACTACTTCGTCTTGGGCTTGGCTGGAGCTCTGCATTCTTTCGCTACGATCAACGAACCAACCAATTTGAAAGA TGTTTGAAGGATAATATCCGAGTCTCTGGTATTAGCCTGATGGCCTTGGAAAATGTGATCGAAAATGTGGTACAA TGCGGTACCAACATGCAGCGCCTGCGGTTATTTGCCCAAGACCCGCCAGCCAACTACAGAGAACTTTCTACGTTT TTCACATTAACTAGCACGGTTGAGATAATAATCTTTAACCTGGAACAACAGATCTCCGATCATTCAAAAAATATT GCTTCACTTCTACAAATAAAGGCACTATTTCACCGCTGCGGGGACGTGGTAGGCGTCCTGGCAGCTATTGTTGGC GCTGCACAAAGGGCTGTCTCGGACGCACAAGTCATATCAATTGTCGTGGAACGTGCAGCTTTTTTTGCCCAGAAG TTTGGCTGGATCGAGAACCTTGTGCATGAGATTGTGATTCGAGTGACTCAGCCATGGTTCGGATTCATCGAGACT TGGATTGGGCTTAGATCCGAAGACGCAGCTCTCAAAGAATATATGACAAACGACAAAAGCTTCGTCCGACTGGAA ACTTATGACCGTGGCAAGTTCAAGACTGGGCCAGCGCGAATTGACTATATCTACCAAGCGGAGCACATGCCGTCT TTCATCCCGGCCGACCAAGCCCGTTCTATCTTTGAGTGTGGGCGAAGTCTTCAACTATTGAAACGATCCCATCCT CGTCATCCTATCGCACGGCGCGATGTTCTCTCACGAATCGGTGGTCTCCATCTGCATTGTGCGACCACCTGGGCT GGCATTGAGCAAATTCAAACAAAAGCCCAGGAATACGAGTCAAGACTCCGCGCTGAGATCAAGAAATATCATCAG GGGGATGCAGGCTTGCAGGATTCATCATCAAATGTGGTCACCCAGACCGTCGATCAAACTGCCAACACAGAGGTT ACAACGACAGCCTTTCAACTCTTCGATATCGACGATGAAAAAAATGATTCAGGACCAGTGACGGATTACAAGGCT CTTTCGAAAGATGGCCTCAAGCGACTGCTCGATAAAGCCCGGGGATTTGAAGCCGAAGATACCAATGAAAGAAGC TATCTTGGTCCTGAGTTGACATATGGCCTCCATTTATCCCTTGCTCCCATTCTTTCGTCACAGGCACTTCTCATC GACTACTCTTGCCTGCACCTTCTCTTCAAAGAGCATCGAATTCGCCATCATCTGAACATGCAATGGCGTTTCCAG TTGCTGGGAGAGGGCTCGTTTGTCGCTCGTCTTTCTAATTCACTGTTCGACCCGGAAATGGAAAGTGGAGAGCGA AGGGCTGGAAAAGTGCGCAGTGGTGTCGACACCGGTCTACGCCTCGGCAGTCGTGACACATGGCCGCCAGCTAGT TCAGAGTTGCGACTCGTCTTAATTGGTCTGCTCGGAGATTGTTACTTTGGTGGCACAAATACAGAAGATGACGAA AAAACGCACGCCCAGAAGGACAAGGAATTGCCTGGTGGCCTGAGCTTCGGAATTCGAGAATTGACAGACGAAGAA ATTGAAGGATGTAAAAATCCGAATGCAATAGAGGCTTTGGACTTCCTTCGTCTGCAGTACACACCACCAGAAGTT CTTGAATCTCTCATTACTGCTCGCTCTTTGAATAAGTATGATTGTCTGTTCAAGCATTTGCTCCGGTTAATCCGC ATGGCTTCTGCCGTTAAACGACTTATCCGGGATTCTACTGCCCGAGGATCTCTATCAGGAGACACACACAATGTG TACCAGAAGTTCAGAATGGATGCCCAGCACTTTGTGCTAGCGGTAAGTGATTACTGCTTCCATATTGGAATTGGG TCCATCTGGCAGCGCTTTCAAGACACACTTACCAAAATCGAGCACTGCCTCAACCGCGGTGACATCGACGGTACG ATTGAAGCGGCTCACTCGGTACCACGACTTCGCGACTATCACGAAGATATCCTTGACCAGATGTTGTTCGCATTA TTCCTCAGTAAGCGCCATGCGCAGGCTGCCAAACTGCTCGAGTCAATTTTCGGCACTATTCTCAGTTTCGGCCTT CTCTCAAGGGCAGATGGAATTGGGATGCGCAACGAAAGCGAAGGGGCTGTTCTCCACCTGTATCAGTCTTTCAGA AAACAGACCTCCGCCTTTGTCAATTACCTTCGCAGCATGGAGTCCGGAAAAGCCACTTCGAAATCAATGGCTAAA TCAGGGGAATTCTTCTCTTCGCGGACAGACCCAACCAGCGTTTTTGAGCATCTACGAGTGAGATTAGACGTCAAG AACTATTATTGA |
Gene | >Pro_DTO377G3_2|g2100.t1 ATGGACTATGATCATGAGCTGGATCCTTTCTCGAGTGAAAGCCTCTGGAGACTCTCCAAATTCAGCATAGAAGCT CTGCAGCCATTGGGATCGTTACCATGGAACACTACTCTAAGTGGTAAGTCTCAACCGCAGATACTTTAGGGCCTT CAATAACACTCATTTATTTATAGGTGATACTACATCTTGTTTTGAGATATACCCACAGCCTGAAGACAAGATCGA CCCTGTATGGAAGCTGGATCTCTTTCCAACCGGCTTGGAGAAACCAGAATCAGTTACCGACTCGAGCATCAATCC CTCCATAGACAGCGAGTCTGACACAACATGTGATTCTTTAAGAGACATATCAGGCGACAACAACGATATCTGGTC TTTGGATTTACTTCAGGAAGAACCTGGTCAAATACCCCCGCAGAAATCGTGGGAGAGGTATCAACATAAGTCTTT CCAAGAGCCTGTGTCAGCCTATTTTAGCGAATCTGGAGCACAGGGCTTCGATGCAGCCTTGGTACAACGAAACAT GGTAAAGAAAGACGGTGCGCCTACTCGAATTGTTCGAACAGATGTGTTCATTCGATCACTACTTCGTCTTGGGCT TGGCTGGAGCTCTGCATTCTTTCGCTACGATCAACGAACCAACCAATTTGAAAGATGTTTGAAGGATAATATCCG AGTCTCTGGTATTAGCCTGATGGCCTTGGAAAATGTGATCGAAAATGTGGTACAATGCGGTACCAACATGCAGCG CCTGCGGTTATTTGCCCAAGACCCGCCAGCCAACTACAGAGAACTTTCTACGTTTTTCACATTAACTAGCACGGT TGAGATAATAATCTTTAACCTGGAACAACAGATCTCCGATCATTCAAAAAATATTGCTTCACTTCTACAAATAAA GGCACTATTTCACCGCTGCGGGGACGTGGTAGGCGTCCTGGCAGCTATTGTTGGCGCTGCACAAAGGGCTGTCTC GGACGCACAAGTCATATCAATTGTCGTGGAACGTGCAGCTTTTTTTGCCCAGAAGTTTGGCTGGATCGAGAACCT TGTGCATGAGATTGTGATTCGAGTGACTCAGCCATGGTTCGGATTCATCGAGACTTGGATTGGGCTTAGATCCGA AGACGCAGCTCTCAAAGAATATATGACAAACGACAAAAGCTTCGTCCGACTGGAAACTTATGACCGTGGCAAGTT CAAGACTGGGCCAGCGCGAATTGACTATATCTACCAAGCGGAGCACATGCCGTCTTTCATCCCGGCCGACCAAGC CCGTTCTATCTTTGAGTGTGGGCGAAGTCTTCAACTATTGAAACGATCCCATCCTCGTCATCCTATCGCACGGCG CGATGTTCTCTCACGAATCGGTGGTCTCCATCTGCATTGTGCGACCACCTGGGCTGGCATTGAGCAAATTCAAAC AAAAGCCCAGGAATACGAGTCAAGACTCCGCGCTGAGATCAAGAAATATCATCAGGGGGATGCAGGCTTGCAGGA TTCATCATCAAATGTGGTCACCCAGACCGTCGATCAAACTGCCAACACAGAGGTTACAACGACAGCCTTTCAACT CTTCGATATCGACGATGAAAAAAATGATTCAGGACCAGTGACGGATTACAAGGCTCTTTCGAAAGATGGCCTCAA GCGACTGCTCGATAAAGCCCGGGGATTTGAAGCCGAAGATACCAATGAAAGAAGCTATCTTGGTCCTGAGTTGAC ATATGGCCTCCATTTATCCCTTGCTCCCATTCTTTCGTCACAGGCACTTCTCATCGACTACTCTTGCCTGCACCT TCTCTTCAAAGAGCATCGAATTCGCCATCATCTGAACATGCAATGGCGTTTCCAGTTGCTGGGAGAGGGCTCGTT TGTCGCTCGTCTTTCTAATTCACTGTTCGACCCGGAAATGGAAAGTGGAGAGCGAAGGGCTGGAAAAGTGCGCAG TGGTGTCGACACCGGTCTACGCCTCGGCAGTCGTGACACATGGCCGCCAGCTAGTTCAGAGTTGCGACTCGTCTT AATTGGTCTGCTCGGAGATTGTTACTTTGGTGGCACAAATACAGAAGATGACGAAAAAACGCACGCCCAGAAGGA CAAGGAATTGCCTGGTGGCCTGAGCTTCGGAATTCGAGAATTGACAGACGAAGAAATTGAAGGATGTAAAAATCC GAATGCAATAGAGGCTTTGGACTTCCTTCGTCTGCAGTACACACCACCAGAAGTTCTTGAATCTCTCATTACTGC TCGCTCTTTGAATAAGTATGATTGTCTGTTCAAGCATTTGCTCCGGTTAATCCGCATGGCTTCTGCCGTTAAACG ACTTATCCGGGATTCTACTGCCCGAGGATCTCTATCAGGAGACACACACAATGTGTACCAGAAGTTCAGAATGGA TGCCCAGCACTTTGTGCTAGCGGTAAGTGATTACTGCTTCCATATTGGAATTGGGTCCATCTGGCAGCGCTTTCA AGACACACTTACCAAAATCGAGCACTGCCTCAACCGCGGTGACATCGACGGTACGATTGAAGCGGCTCACTCGGT ACCACGACTTCGCGACTATCACGAAGATATCCTTGACCAGATGTTGTTCGCATTATTCCTCAGTAAGCGCCATGC GCAGGCTGCCAAACTGCTCGAGTCAATTTTCGGCACTATTCTCAGTTTCGGCCTTCTCTCAAGGGCAGATGGAAT TGGGATGCGCAACGAAAGCGAAGGGGCTGTTCTCCACCTGTATCAGTCTTTCAGAAAACAGACCTCCGCCTTTGT CAATTACCTTCGCAGCATGGAGTCCGGAAAAGCCACTTCGAAATCAATGGCTAAATCAGGGGAATTCTTCTCTTC GCGGACAGACCCAACCAGCGTTTTTGAGCATCTACGAGTGAGATTAGACGTCAAGAACTATTATTGA |