© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g21.t1 |
| Gene name | |
| Location | scaffold_01:55762..56493 |
| Strand | + |
| Gene length (bp) | 731 |
| Transcript length (bp) | 435 |
| Coding sequence length (bp) | 435 |
| Protein length (aa) | 145 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03169 | OPT | OPT oligopeptide transporter protein | 5.3E-23 | 1 | 127 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0035673 | oligopeptide transmembrane transporter activity | Yes |
| GO:1904680 | peptide transmembrane transporter activity | No |
| GO:0042887 | amide transmembrane transporter activity | No |
| GO:0022857 | transmembrane transporter activity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| Yes | 1 - 24 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 25 | 18 |
| 2 | 91 | 113 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g21.t1 MPSYYTVVSILLVLAVAMTGIRGLAESDFNAGSGLAAQLVLAAIIPRSNPNSVMINILSAAIANGGANQAGDLAF DLKIGQLIGAPSEVQTYGQIIGSIFGALVSCFTYRLFTNRFPVPGDFIQVPNSFLQRSFLCHWHIYSEF* |
| Coding | >Pro_DTO377G3_2|g21.t1 ATGCCTTCGTATTACACGGTTGTCTCGATCCTGCTTGTCCTGGCGGTGGCGATGACTGGCATTCGTGGTCTGGCG GAATCCGACTTCAACGCAGGAAGCGGTTTAGCTGCCCAGCTGGTTTTGGCCGCCATAATCCCCCGCTCAAACCCT AATAGCGTGATGATCAATATCCTATCTGCTGCAATCGCAAATGGAGGTGCTAACCAGGCCGGCGATCTTGCCTTT GACTTGAAGATAGGGCAACTCATCGGTGCGCCATCAGAAGTCCAGACCTACGGCCAGATAATAGGATCGATTTTC GGCGCGCTTGTCTCTTGCTTCACGTATAGACTGTTCACCAACCGATTCCCGGTTCCAGGAGACTTCATCCAGGTA CCAAACTCGTTCCTGCAACGGAGTTTCCTTTGCCATTGGCATATCTACTCCGAGTTTTAG |
| Transcript | >Pro_DTO377G3_2|g21.t1 ATGCCTTCGTATTACACGGTTGTCTCGATCCTGCTTGTCCTGGCGGTGGCGATGACTGGCATTCGTGGTCTGGCG GAATCCGACTTCAACGCAGGAAGCGGTTTAGCTGCCCAGCTGGTTTTGGCCGCCATAATCCCCCGCTCAAACCCT AATAGCGTGATGATCAATATCCTATCTGCTGCAATCGCAAATGGAGGTGCTAACCAGGCCGGCGATCTTGCCTTT GACTTGAAGATAGGGCAACTCATCGGTGCGCCATCAGAAGTCCAGACCTACGGCCAGATAATAGGATCGATTTTC GGCGCGCTTGTCTCTTGCTTCACGTATAGACTGTTCACCAACCGATTCCCGGTTCCAGGAGACTTCATCCAGGTA CCAAACTCGTTCCTGCAACGGAGTTTCCTTTGCCATTGGCATATCTACTCCGAGTTTTAG |
| Gene | >Pro_DTO377G3_2|g21.t1 ATGCCTTCGTATTACACGGTTGTCTCGATCCTGCTTGTCCTGGCGGTGGCGATGACTGGCATTCGTGGTCTGGCG GAATCCGACTTCAACGCAGGAAGCGGTTTAGGTATGGCCTACTCTGTCAGATTATATCGTCGTCATTCCAGAATA TCATCTCTGGCCTGAGATCGACTAATAAATATCTTGTGTGAACAGCTGCCCAGCTGGTTTTGGCCGCCATAATCC CCCGCTCAAACCCTAATAGCGTGATGATCAATATCCTATCTGCTGCAATCGCAAATGGAGGTGCTAACCAGGCCG GCGATCTTGCCTTTGACTTGAAGATAGGGCAACTCATCGGTGCGCCATCAGAAGTCCAGACCTACGGCCAGATAA TAGGATCGATTTTCGGCGCGCTTGTCTCTTGCTTCACGTATAGACTGTTCACCAACCGATTCCCGGTTCCAGGAG ACTTCATCCAGGTACCAAACTCGTTCCTGCAAGTCAGTACCGCGAGAATGGTCTTGAATAAAGCCTTCCCCCTGG TGTGGGTGGTTACGCCCTGGGCTTTGGAATTTTCCTCGCCATTTCAACAGTGGCCAAGATGAGGTTTCAAGACAA TTGGTGGCATGTTTATATTCCTAGCGGAGTTTCCTTTGCCATTGGTAAGCCGTTCTCTCTATTTTGGGAAGACTC TATTTATGTTAATGATGTTAATATCGATTCACAGGCATATCTACTCCGAGTTTTAG |