Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g21.t1
Gene name
Locationscaffold_01:55762..56493
Strand+
Gene length (bp)731
Transcript length (bp)435
Coding sequence length (bp)435
Protein length (aa) 145

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03169 OPT OPT oligopeptide transporter protein 4.8E-23 1 127

GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0008150 biological_process No
GO:0051234 establishment of localization No
GO:0006810 transport No
GO:0051179 localization No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
Yes 1 - 24 0.45

Transmembrane Domains

Domain # Start End Length
1 7 25 18
2 91 113 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g21.t1
MPSYYTVVSILLVLAVAMTGIRGLAESDFNAGSGLAAQLVLAAIIPRSNPNSVMINILSAAIANGGANQAGDLAF
DLKIGQLIGAPSEVQTYGQIIGSIFGALVSCFTYRLFTNRFPVPGDFIQVPNSFLQRSFLCHWHIYSEF*
Coding >Pro_DTO377G3_2|g21.t1
ATGCCTTCGTATTACACGGTTGTCTCGATCCTGCTTGTCCTGGCGGTGGCGATGACTGGCATTCGTGGTCTGGCG
GAATCCGACTTCAACGCAGGAAGCGGTTTAGCTGCCCAGCTGGTTTTGGCCGCCATAATCCCCCGCTCAAACCCT
AATAGCGTGATGATCAATATCCTATCTGCTGCAATCGCAAATGGAGGTGCTAACCAGGCCGGCGATCTTGCCTTT
GACTTGAAGATAGGGCAACTCATCGGTGCGCCATCAGAAGTCCAGACCTACGGCCAGATAATAGGATCGATTTTC
GGCGCGCTTGTCTCTTGCTTCACGTATAGACTGTTCACCAACCGATTCCCGGTTCCAGGAGACTTCATCCAGGTA
CCAAACTCGTTCCTGCAACGGAGTTTCCTTTGCCATTGGCATATCTACTCCGAGTTTTAG
Transcript >Pro_DTO377G3_2|g21.t1
ATGCCTTCGTATTACACGGTTGTCTCGATCCTGCTTGTCCTGGCGGTGGCGATGACTGGCATTCGTGGTCTGGCG
GAATCCGACTTCAACGCAGGAAGCGGTTTAGCTGCCCAGCTGGTTTTGGCCGCCATAATCCCCCGCTCAAACCCT
AATAGCGTGATGATCAATATCCTATCTGCTGCAATCGCAAATGGAGGTGCTAACCAGGCCGGCGATCTTGCCTTT
GACTTGAAGATAGGGCAACTCATCGGTGCGCCATCAGAAGTCCAGACCTACGGCCAGATAATAGGATCGATTTTC
GGCGCGCTTGTCTCTTGCTTCACGTATAGACTGTTCACCAACCGATTCCCGGTTCCAGGAGACTTCATCCAGGTA
CCAAACTCGTTCCTGCAACGGAGTTTCCTTTGCCATTGGCATATCTACTCCGAGTTTTAG
Gene >Pro_DTO377G3_2|g21.t1
ATGCCTTCGTATTACACGGTTGTCTCGATCCTGCTTGTCCTGGCGGTGGCGATGACTGGCATTCGTGGTCTGGCG
GAATCCGACTTCAACGCAGGAAGCGGTTTAGGTATGGCCTACTCTGTCAGATTATATCGTCGTCATTCCAGAATA
TCATCTCTGGCCTGAGATCGACTAATAAATATCTTGTGTGAACAGCTGCCCAGCTGGTTTTGGCCGCCATAATCC
CCCGCTCAAACCCTAATAGCGTGATGATCAATATCCTATCTGCTGCAATCGCAAATGGAGGTGCTAACCAGGCCG
GCGATCTTGCCTTTGACTTGAAGATAGGGCAACTCATCGGTGCGCCATCAGAAGTCCAGACCTACGGCCAGATAA
TAGGATCGATTTTCGGCGCGCTTGTCTCTTGCTTCACGTATAGACTGTTCACCAACCGATTCCCGGTTCCAGGAG
ACTTCATCCAGGTACCAAACTCGTTCCTGCAAGTCAGTACCGCGAGAATGGTCTTGAATAAAGCCTTCCCCCTGG
TGTGGGTGGTTACGCCCTGGGCTTTGGAATTTTCCTCGCCATTTCAACAGTGGCCAAGATGAGGTTTCAAGACAA
TTGGTGGCATGTTTATATTCCTAGCGGAGTTTCCTTTGCCATTGGTAAGCCGTTCTCTCTATTTTGGGAAGACTC
TATTTATGTTAATGATGTTAATATCGATTCACAGGCATATCTACTCCGAGTTTTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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