Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g2079.t1
Gene name
Location	scaffold_02:1607724..1610014
Strand	-
Gene length (bp)	2290
Transcript length (bp)	2118
Coding sequence length (bp)	2118
Protein length (aa)	706

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF06472	ABC_membrane_2	ABC transporter transmembrane region 2	5.3E-105	97	365
PF00005	ABC_tran	ABC transporter	2.1E-18	478	620

GO

GO Term	Description	Terminal node
GO:0055085	transmembrane transport	Yes
GO:0016021	integral component of membrane	Yes
GO:0005524	ATP binding	Yes
GO:0140359	ABC-type transporter activity	Yes
GO:0097367	carbohydrate derivative binding	No
GO:0051234	establishment of localization	No
GO:0022857	transmembrane transporter activity	No
GO:0030554	adenyl nucleotide binding	No
GO:0005575	cellular_component	No
GO:0015399	primary active transmembrane transporter activity	No
GO:0140657	ATP-dependent activity	No
GO:0022804	active transmembrane transporter activity	No
GO:0017076	purine nucleotide binding	No
GO:0008150	biological_process	No
GO:0006810	transport	No
GO:0043167	ion binding	No
GO:0032559	adenyl ribonucleotide binding	No
GO:0035639	purine ribonucleoside triphosphate binding	No
GO:0032553	ribonucleotide binding	No
GO:0000166	nucleotide binding	No
GO:1901265	nucleoside phosphate binding	No
GO:0005488	binding	No
GO:0036094	small molecule binding	No
GO:0003674	molecular_function	No
GO:0097159	organic cyclic compound binding	No
GO:0042626	ATPase-coupled transmembrane transporter activity	No
GO:0032555	purine ribonucleotide binding	No
GO:0051179	localization	No
GO:0031224	intrinsic component of membrane	No
GO:0005215	transporter activity	No
GO:0110165	cellular anatomical entity	No
GO:1901363	heterocyclic compound binding	No
GO:0043168	anion binding	No
GO:0009987	cellular process	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 54	0.45

Transmembrane Domains

Domain #	Start	End	Length
1	112	131	19
2	151	173	22
3	346	368	22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
3d_25C	Three days - 25 degrees Celsius	65.53	39.94	91.12
5d_25C	Five days - 25 degrees Celsius	90.16	54.60	125.73
7d_25C	Seven days - 25 degrees Celsius	94.31	56.37	132.26
10d_25C	Ten days - 25 degrees Celsius	134.13	79.97	188.30
7d_15C	Seven days - 15 degrees Celsius	106.12	62.35	149.88
7d_30C	Seven days - 30 degrees Celsius	96.24	57.93	134.55

Differential expression

Label1	Label2	Q-value	Significant difference
3d_25C	5d_25C	0.148176	no
3d_25C	7d_25C	0.097721	no
3d_25C	7d_15C	0.024892	yes
3d_25C	7d_30C	0.072335	no
3d_25C	10d_25C	0.000700	yes
5d_25C	7d_25C	0.894240	no
5d_25C	7d_15C	0.539518	no
5d_25C	7d_30C	0.834937	no
5d_25C	10d_25C	0.060029	no
7d_25C	7d_15C	0.695091	no
7d_25C	7d_30C	0.955867	no
7d_25C	10d_25C	0.121522	no
7d_15C	7d_30C	0.748449	no
7d_15C	10d_25C	0.351618	no
7d_30C	10d_25C	0.148527	no

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g2079.t1 MAAQSKLLPPERSIKQILSSLTSLYLRNRTNISRAVYLALFAALAKRIHNAISEQKAASQQVELLRRPGTSSLGD EEQPRKKRVGINREFFKNLLRLLKIVIPGWRSKELRLLVSHTVFLVLRTILSLYVAELDGRLVSNLVRGKGKDFL LGLVWWMIVAIPATFTNSMLAYHQCKLALSYRKRLTDYIHEKYLSNMTFYAISALDDRIKNPDQLVTVDVSRFSD SLAELYSNLAKPILDMAIYNYSLSKNVGGEGLFIMSLLVQLSANVMRMLTPPFGKYVADEARLEGEFRFLHSRLI EYNEEVALYHGHEAEKDTLDKGYFTLIKHVNRILRRRLYHGFMEDFVIKYFWGAMGLVLCSVPVFFKIPGQTTHS MADHTESFVTNRRMLLSSSDAFGRLMFSYKEISELAGYTSRVSSLLEVMDDLLAGRFEKKLVSSASTAENAEVLS GRGKVLESDAIEFIDVPIVSPNGDVLVRKLSFTVNPGDHLLIVGPNGCGKSSLFRILGGLWPVYGGTVKKPPFHD IFYIPQRPYLSRGTLRQQVIYPDGVREMRAKGVTDADLYEILSVVDIASVVDRPGGWDAEEEWRDVLSGGLQQRI AMARLFYHRPKFAILDECTSSVTLEIEKIMYETAKKLGITLMTVSHRRSLWKYHQKILQFDGQGGYIFTSLDWER RLKLEDEKEELDLQLRAVPELERRVAELTA*
Coding	>Pro_DTO377G3_2\|g2079.t1 ATGGCCGCTCAGTCCAAACTACTACCGCCCGAACGCTCCATCAAACAGATCCTCTCCAGCCTAACATCCCTCTAC CTGCGAAACCGAACCAATATCTCACGTGCCGTATACCTCGCCCTCTTTGCCGCGCTCGCCAAACGAATCCACAAT GCCATCTCCGAGCAGAAAGCCGCGTCACAGCAGGTAGAGCTGCTCCGACGGCCCGGCACCAGTAGTCTAGGTGAT GAGGAACAACCCCGCAAGAAGCGCGTGGGGATCAACCGGGAATTCTTCAAGAACTTGCTCCGTTTATTGAAGATC GTTATACCCGGATGGCGGAGCAAGGAGCTACGGCTGCTGGTAAGCCACACCGTCTTCCTGGTGCTGCGGACGATA CTTAGTTTGTACGTCGCCGAGCTGGACGGAAGACTTGTGAGCAACTTGGTGCGCGGTAAGGGGAAGGATTTCTTG CTCGGTCTTGTTTGGTGGATGATTGTGGCTATCCCTGCTACTTTTACGAATTCTATGCTCGCCTACCATCAGTGC AAGCTTGCTCTCAGCTACCGCAAGCGTCTCACGGACTATATCCACGAGAAGTATCTGTCTAATATGACTTTCTAT GCCATCTCCGCCTTGGACGATCGAATCAAGAATCCCGACCAACTTGTCACGGTCGATGTGTCCCGCTTCTCAGAC AGTCTAGCAGAACTGTATTCCAATTTAGCTAAGCCCATTCTCGATATGGCTATTTACAACTACTCGCTCTCCAAG AACGTGGGAGGTGAAGGGCTGTTCATCATGAGTCTGCTAGTGCAGTTGTCCGCCAACGTCATGCGTATGCTGACT CCACCATTTGGCAAATATGTTGCCGATGAGGCTCGGCTGGAGGGGGAGTTCCGTTTCCTCCATTCACGGCTTATT GAGTACAATGAAGAAGTGGCGCTTTACCACGGCCACGAGGCCGAGAAGGATACCCTGGACAAGGGTTATTTCACG CTGATCAAACATGTGAACCGCATTCTGCGCCGGCGACTTTACCACGGATTCATGGAGGACTTTGTGATCAAGTAT TTCTGGGGAGCTATGGGCTTGGTGCTATGTAGTGTGCCTGTCTTCTTCAAGATCCCCGGTCAGACTACCCACAGC ATGGCAGATCACACTGAAAGCTTCGTCACCAATCGCCGAATGTTGCTTTCCTCCTCAGATGCTTTTGGCCGATTG ATGTTCTCCTACAAAGAAATCTCAGAGCTGGCTGGCTACACTTCGCGTGTCTCCTCATTATTGGAAGTGATGGAC GACCTCCTTGCTGGAAGGTTCGAGAAGAAGTTGGTATCTTCCGCTTCGACGGCAGAGAATGCGGAGGTGCTGTCT GGTCGGGGTAAAGTTTTAGAAAGCGACGCAATTGAGTTCATCGATGTACCGATCGTATCCCCGAACGGCGACGTA TTGGTGCGTAAGCTTTCCTTCACCGTTAACCCCGGCGACCACCTCCTGATCGTCGGACCCAACGGGTGCGGCAAA TCGTCTCTTTTCCGGATCCTGGGCGGGCTCTGGCCAGTATACGGAGGTACGGTGAAAAAACCCCCTTTCCATGAT ATTTTCTACATTCCCCAGCGACCATATCTGTCTCGTGGGACCCTGCGACAGCAAGTGATCTACCCAGATGGAGTG CGCGAGATGCGCGCTAAGGGTGTCACTGACGCCGATCTCTACGAGATCCTATCAGTGGTTGATATCGCGTCCGTC GTAGACCGTCCGGGAGGCTGGGATGCAGAGGAAGAATGGCGCGACGTACTATCCGGTGGTCTGCAGCAGCGCATC GCTATGGCTCGGTTGTTCTATCACCGACCCAAGTTTGCCATTTTGGACGAGTGTACATCCTCGGTGACGCTGGAG ATTGAGAAGATTATGTACGAGACGGCCAAGAAACTTGGCATTACTCTCATGACTGTCTCGCACCGACGCAGTCTC TGGAAGTATCACCAGAAGATCCTGCAGTTCGATGGACAGGGCGGCTACATCTTCACCAGTCTTGACTGGGAGCGG CGGTTGAAACTCGAAGATGAGAAGGAAGAGTTGGACTTGCAGTTACGGGCTGTACCGGAACTGGAACGTCGGGTT GCCGAGTTAACGGCTTAG
Transcript	>Pro_DTO377G3_2\|g2079.t1 ATGGCCGCTCAGTCCAAACTACTACCGCCCGAACGCTCCATCAAACAGATCCTCTCCAGCCTAACATCCCTCTAC CTGCGAAACCGAACCAATATCTCACGTGCCGTATACCTCGCCCTCTTTGCCGCGCTCGCCAAACGAATCCACAAT GCCATCTCCGAGCAGAAAGCCGCGTCACAGCAGGTAGAGCTGCTCCGACGGCCCGGCACCAGTAGTCTAGGTGAT GAGGAACAACCCCGCAAGAAGCGCGTGGGGATCAACCGGGAATTCTTCAAGAACTTGCTCCGTTTATTGAAGATC GTTATACCCGGATGGCGGAGCAAGGAGCTACGGCTGCTGGTAAGCCACACCGTCTTCCTGGTGCTGCGGACGATA CTTAGTTTGTACGTCGCCGAGCTGGACGGAAGACTTGTGAGCAACTTGGTGCGCGGTAAGGGGAAGGATTTCTTG CTCGGTCTTGTTTGGTGGATGATTGTGGCTATCCCTGCTACTTTTACGAATTCTATGCTCGCCTACCATCAGTGC AAGCTTGCTCTCAGCTACCGCAAGCGTCTCACGGACTATATCCACGAGAAGTATCTGTCTAATATGACTTTCTAT GCCATCTCCGCCTTGGACGATCGAATCAAGAATCCCGACCAACTTGTCACGGTCGATGTGTCCCGCTTCTCAGAC AGTCTAGCAGAACTGTATTCCAATTTAGCTAAGCCCATTCTCGATATGGCTATTTACAACTACTCGCTCTCCAAG AACGTGGGAGGTGAAGGGCTGTTCATCATGAGTCTGCTAGTGCAGTTGTCCGCCAACGTCATGCGTATGCTGACT CCACCATTTGGCAAATATGTTGCCGATGAGGCTCGGCTGGAGGGGGAGTTCCGTTTCCTCCATTCACGGCTTATT GAGTACAATGAAGAAGTGGCGCTTTACCACGGCCACGAGGCCGAGAAGGATACCCTGGACAAGGGTTATTTCACG CTGATCAAACATGTGAACCGCATTCTGCGCCGGCGACTTTACCACGGATTCATGGAGGACTTTGTGATCAAGTAT TTCTGGGGAGCTATGGGCTTGGTGCTATGTAGTGTGCCTGTCTTCTTCAAGATCCCCGGTCAGACTACCCACAGC ATGGCAGATCACACTGAAAGCTTCGTCACCAATCGCCGAATGTTGCTTTCCTCCTCAGATGCTTTTGGCCGATTG ATGTTCTCCTACAAAGAAATCTCAGAGCTGGCTGGCTACACTTCGCGTGTCTCCTCATTATTGGAAGTGATGGAC GACCTCCTTGCTGGAAGGTTCGAGAAGAAGTTGGTATCTTCCGCTTCGACGGCAGAGAATGCGGAGGTGCTGTCT GGTCGGGGTAAAGTTTTAGAAAGCGACGCAATTGAGTTCATCGATGTACCGATCGTATCCCCGAACGGCGACGTA TTGGTGCGTAAGCTTTCCTTCACCGTTAACCCCGGCGACCACCTCCTGATCGTCGGACCCAACGGGTGCGGCAAA TCGTCTCTTTTCCGGATCCTGGGCGGGCTCTGGCCAGTATACGGAGGTACGGTGAAAAAACCCCCTTTCCATGAT ATTTTCTACATTCCCCAGCGACCATATCTGTCTCGTGGGACCCTGCGACAGCAAGTGATCTACCCAGATGGAGTG CGCGAGATGCGCGCTAAGGGTGTCACTGACGCCGATCTCTACGAGATCCTATCAGTGGTTGATATCGCGTCCGTC GTAGACCGTCCGGGAGGCTGGGATGCAGAGGAAGAATGGCGCGACGTACTATCCGGTGGTCTGCAGCAGCGCATC GCTATGGCTCGGTTGTTCTATCACCGACCCAAGTTTGCCATTTTGGACGAGTGTACATCCTCGGTGACGCTGGAG ATTGAGAAGATTATGTACGAGACGGCCAAGAAACTTGGCATTACTCTCATGACTGTCTCGCACCGACGCAGTCTC TGGAAGTATCACCAGAAGATCCTGCAGTTCGATGGACAGGGCGGCTACATCTTCACCAGTCTTGACTGGGAGCGG CGGTTGAAACTCGAAGATGAGAAGGAAGAGTTGGACTTGCAGTTACGGGCTGTACCGGAACTGGAACGTCGGGTT GCCGAGTTAACGGCTTAG
Gene	>Pro_DTO377G3_2\|g2079.t1 ATGGCCGCTCAGTCCAAACTACTACCGCCCGAACGCTCCATCAAACAGATCCTCTCCAGCCTAACATCCCTCTAC CTGCGAAACCGAACCAATATCTCACGTGCCGTATACCTCGCCCTCTTTGCCGCGCTCGCCAAACGAATCCACAAT GCCATCTCCGAGCAGAAAGCCGCGTCACAGCAGGTAGAGCTGCTCCGACGGCCCGGCACCAGTAGTCTAGGTGAT GAGGAACAACCCCGCAAGAAGCGCGTGGGGATCAACCGGGAATTCTTCAAGAACTTGCTCCGTTTATTGAAGATC GTTATACCCGGATGGCGGAGCAAGGAGCTACGGCTGCTGGTAAGCCACACCGTCTTCCTGGTGCTGCGGACGATA CTTAGTTTGTACGTCGCCGAGCTGGACGGAAGACTTGTGAGCAACTTGGTGCGCGGTAAGGGGAAGGATTTCTTG CTCGGTCTTGTTTGGTGGATGATTGTGGCTATCCCTGCTACTTTTACGAATTCTATGGTAAGTCTCCGGTTTCCG GTGCTAGATGCGACCGTTCAGTACATTTGCTGACTTGATGTTTCGCCGTATTAGCTCGCCTACCATCAGTGCAAG CTTGCTCTCAGCTACCGCAAGCGTCTCACGGACTATATCCACGAGAAGTATCTGTCTAATATGACTTTCTATGCC ATCTCCGCCTTGGACGATCGAATCAAGAATCCCGACCAACTTGTCACGGTCGATGTGTCCCGCTTCTCAGACAGT CTAGCAGAACTGTATTCCAATTTAGCTAAGCCCATTCTCGATATGGCTATTTACAACTACTCGCTCTCCAAGAAC GTGGGAGGTGAAGGGCTGTTCATCATGAGTCTGCTAGTGCAGTTGTCCGCCAACGTCATGCGTATGCTGACTCCA CCATTTGGCAAATATGTTGCCGATGAGGCTCGGCTGGAGGGGGAGTTCCGTTTCCTCCATTCACGGCTTATTGAG TACAATGAAGAAGTGGCGCTTTACCACGGCCACGAGGCCGAGAAGGATACCCTGGACAAGGGTTATTTCACGCTG ATCAAACATGTGAACCGCATTCTGCGCCGGCGACTTTACCACGGATTCATGGAGGACTTTGTGATCAAGTATTTC TGGGGAGCTATGGGCTTGGTGCTATGTAGTGTGCCTGTCTTCTTCAAGATCCCCGGTCAGACTACCCACAGCATG GCAGATCACACTGAAAGTAAGTTGTTGCCCTTTGGTATTGGATTTTTAAATTCTGATGACTCCCAGGCTTCGTCA CCAATCGCCGAATGTTGCTTTCCTCCTCAGATGCTTTTGGCCGATTGATGTTCTCCTACAAAGAAATCTCAGAGC TGGCTGGCTACACTTCGCGTGTCTCCTCATTATTGGAAGTGATGGACGACCTCCTTGCTGGAAGGTTCGAGAAGA AGTTGGTATCTTCCGCTTCGACGGCAGAGAATGCGGAGGTGCTGTCTGGTCGGGGTAAAGTTTTAGAAAGCGACG CAATTGAGTTCATCGATGTACCGATCGTATCCCCGAACGGCGACGTATTGGTGCGTAAGCTTTCCTTCACCGTTA ACCCCGGCGACCACCTCCTGATCGTCGGACCCAACGGGTGCGGCAAATCGTCTCTTTTCCGGATCCTGGGCGGGC TCTGGCCAGTATACGGAGGTACGGTGAAAAAACCCCCTTTCCATGATATTTTCTACATTCCCCAGCGACCATATC TGTCTCGTGGGACCCTGCGACAGCAAGTGATCTACCCAGATGGAGTGCGCGAGATGCGCGCTAAGGGTGTCACTG ACGCCGATCTCTACGAGATCCTATCAGTGGTTGATATCGCGTCCGTCGTAGACCGTCCGGGAGGCTGGGATGCAG AGGAAGAATGGCGCGACGTACTATCCGGTGGTCTGCAGCAGCGCATCGCTATGGCTCGGTTGTTCTATCACCGAC CCAAGTTTGCCATTTTGGACGAGTGTACATCCTCGGTGACGCTGGAGATTGAGAAGATTATGTACGAGACGGCCA AGAAACTTGGCATTACTCTCATGACTGTCTCGCACCGACGCAGTCTCTGGAAGTATCACCAGAAGATCCTGCAGT TCGATGGACAGGGCGGCTACATCTTCACCAGTCTTGACTGGGAGCGGCGGTTGAAACTCGAAGAGTAAGTTTCCG CCCTTCCTTTCCGCCGAGCGGTTATTAACAATCTCGCAGTGAGAAGGAAGAGTTGGACTTGCAGTTACGGGCTGT ACCGGAACTGGAACGTCGGGTTGCCGAGTTAACGGCTTAG

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences