Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g2073.t1
Gene name
Location	scaffold_02:1588612..1591045
Strand	+
Gene length (bp)	2433
Transcript length (bp)	2184
Coding sequence length (bp)	2184
Protein length (aa)	728

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00888	Cullin	Cullin family	1.8E-190	2	628
PF10557	Cullin_Nedd8	Cullin protein neddylation domain	2.7E-26	659	720

GO

GO Term	Description	Terminal node
GO:0031625	ubiquitin protein ligase binding	Yes
GO:0006511	ubiquitin-dependent protein catabolic process	Yes
GO:0044248	cellular catabolic process	No
GO:0043170	macromolecule metabolic process	No
GO:0019538	protein metabolic process	No
GO:0008150	biological_process	No
GO:0044389	ubiquitin-like protein ligase binding	No
GO:0019899	enzyme binding	No
GO:0071704	organic substance metabolic process	No
GO:0044260	cellular macromolecule metabolic process	No
GO:0008152	metabolic process	No
GO:0009057	macromolecule catabolic process	No
GO:0005488	binding	No
GO:0009056	catabolic process	No
GO:0005515	protein binding	No
GO:0044265	cellular macromolecule catabolic process	No
GO:0003674	molecular_function	No
GO:0043632	modification-dependent macromolecule catabolic process	No
GO:0006807	nitrogen compound metabolic process	No
GO:0019941	modification-dependent protein catabolic process	No
GO:0006508	proteolysis	No
GO:1901575	organic substance catabolic process	No
GO:0044237	cellular metabolic process	No
GO:1901564	organonitrogen compound metabolic process	No
GO:0009987	cellular process	No
GO:0051603	proteolysis involved in protein catabolic process	No
GO:0044238	primary metabolic process	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 23	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label	Description	Expression (RPKM)	Confidence interval (low)	Confidence interval (high)
3d_25C	Three days - 25 degrees Celsius	90.47	55.27	125.66
5d_25C	Five days - 25 degrees Celsius	112.19	67.80	156.58
7d_25C	Seven days - 25 degrees Celsius	118.81	71.45	166.16
10d_25C	Ten days - 25 degrees Celsius	155.36	92.53	218.19
7d_15C	Seven days - 15 degrees Celsius	105.22	63.30	147.14
7d_30C	Seven days - 30 degrees Celsius	117.58	70.84	164.32

Differential expression

Label1	Label2	Q-value	Significant difference
3d_25C	5d_25C	0.377369	no
3d_25C	7d_25C	0.239291	no
3d_25C	7d_15C	0.570470	no
3d_25C	7d_30C	0.260752	no
3d_25C	10d_25C	0.010411	yes
5d_25C	7d_25C	0.858535	no
5d_25C	7d_15C	0.841748	no
5d_25C	7d_30C	0.887863	no
5d_25C	10d_25C	0.155683	no
7d_25C	7d_15C	0.665412	no
7d_25C	7d_30C	0.976860	no
7d_25C	10d_25C	0.256315	no
7d_15C	7d_30C	0.701173	no
7d_15C	10d_25C	0.074263	no
7d_30C	10d_25C	0.236169	no

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g2073.t1 MKTYMALYTAVHNFCTSQKAVASGQGLQGSRGAHLLGEELYKLLGEYLSSHLNKVYKQSQSHTEEGLLGFYIREW YRYTTAAKYVNHIFRYLNRHWVKREIDEGKKNVYDVYTLHLVKWKTEFFEKVHEKVMDAVLNLIEKQRNGETIEQ SQIKAIVDSFVSLGLDENDSSKSTLDVYRQYFQQPFIRATRSYYENESRQFVAENSVVEYMKKAEARLEEEKLRV GLYLHPDVTKSLTDTCLSVLVTAHSTLLRDEFQVLLDNERQDDLARMYRLLSRIKEGLDPLRATFENHVRRAGLA AVEKVASEGETLEPKLYVDALLQVHTRYQNLVDEAFNGEAEFVRSLDNACREFVNRNRVCKTSSSKSPELLAKYT DSLLKKGSKSAEESELEEMLVQIMTVFKYIEDKDVFQKFYSKNLAKRLVHVSSVSDDAETSMISKLKEACGFEYT NKLQRMFQDMQISKDLNNNYKVWQDKVLEDEDRKKMCDAHFQILGTGFWPLNAPTTPFLAPPEIVKTAERFQTFY FDKHNGRKLTWLWQLCKGEIKANYIKNAKVPYTFQVSTYQMGILLLFNETDTLSYGEIEKATTLATEILDPNLSI LLKAKVLIASPEGAKPEPSTSFTLNYNFKSKKVKVNLNIQIKSEAKVEADDTHKTIEEDRKLLLQSAIVRIMKSR KKMKHVQLVQEVIQQVKSRFPPKIPDIKKNIEALMEKDYIERMDGDEISYIA*
Coding	>Pro_DTO377G3_2\|g2073.t1 ATGAAGACCTACATGGCTCTGTACACGGCTGTCCATAACTTCTGCACATCCCAAAAAGCAGTCGCTAGTGGCCAA GGCCTACAAGGATCACGTGGGGCCCATCTGCTCGGCGAGGAACTTTACAAATTACTCGGCGAATACCTCTCGTCC CATCTGAATAAGGTCTACAAACAATCACAGAGCCACACCGAGGAAGGCCTTCTTGGCTTCTACATTCGCGAATGG TACCGCTATACGACCGCCGCCAAGTACGTGAACCACATTTTCCGCTACCTCAATCGGCACTGGGTCAAGCGTGAG ATCGACGAGGGCAAGAAAAATGTCTATGATGTTTACACTCTGCATTTGGTTAAATGGAAAACGGAATTTTTCGAA AAAGTCCATGAGAAGGTCATGGACGCTGTTCTGAATTTGATCGAGAAGCAACGGAATGGCGAAACCATCGAACAG TCCCAGATCAAAGCTATTGTGGACTCCTTCGTGTCACTGGGTCTGGATGAGAACGATAGCTCTAAGTCAACACTA GATGTCTATCGGCAGTACTTCCAGCAGCCGTTCATCCGTGCCACCAGAAGCTATTATGAAAATGAGTCACGGCAG TTCGTGGCCGAAAATAGTGTGGTGGAATACATGAAGAAGGCAGAAGCTCGTCTGGAAGAGGAGAAGCTCCGGGTC GGTCTGTATTTGCATCCAGATGTCACCAAGAGCTTGACCGATACCTGCCTGTCTGTTCTCGTCACTGCCCACTCA ACTTTGCTTCGCGACGAGTTCCAAGTCTTGCTGGATAACGAACGTCAGGACGATCTTGCTCGTATGTATCGACTC TTATCAAGGATCAAGGAAGGCTTGGATCCTCTGCGCGCGACCTTTGAGAACCACGTGAGACGGGCTGGTTTGGCT GCTGTCGAGAAGGTTGCTTCGGAGGGCGAAACACTCGAGCCCAAGTTGTATGTCGATGCCCTACTGCAAGTTCAC ACAAGGTACCAGAACTTGGTCGACGAGGCCTTTAATGGCGAGGCCGAGTTCGTGCGTTCCCTTGATAACGCCTGC CGAGAGTTCGTCAACCGAAACCGCGTCTGCAAGACGAGCTCTTCTAAGTCTCCCGAACTGCTGGCAAAATATACG GACTCACTGCTCAAGAAAGGATCCAAGTCGGCTGAAGAGTCGGAGCTTGAGGAGATGCTGGTGCAAATCATGACA GTCTTCAAGTACATCGAAGACAAAGACGTTTTCCAGAAGTTCTATTCCAAGAACCTCGCCAAACGTCTAGTCCAT GTGAGCTCTGTTTCTGACGATGCTGAAACAAGCATGATCAGCAAACTGAAGGAGGCGTGTGGTTTCGAATATACC AACAAGCTGCAACGCATGTTCCAGGACATGCAGATTTCCAAGGATCTTAATAACAACTACAAGGTCTGGCAGGAC AAAGTACTAGAGGATGAAGACCGAAAGAAAATGTGCGATGCCCACTTCCAAATCCTGGGAACTGGCTTCTGGCCC CTCAATGCCCCGACCACCCCATTCCTTGCGCCACCGGAGATAGTCAAGACCGCCGAACGGTTCCAGACATTTTAC TTTGACAAGCACAACGGCCGCAAGTTGACATGGCTGTGGCAGCTATGCAAGGGCGAAATCAAAGCTAACTACATC AAAAACGCCAAGGTGCCCTACACTTTCCAGGTGTCGACCTATCAGATGGGCATTCTTCTTCTCTTCAATGAAACC GACACTCTGTCCTACGGTGAGATCGAAAAGGCTACTACCCTAGCTACCGAAATCCTCGATCCCAACCTTAGCATC CTGCTCAAGGCCAAAGTCCTCATCGCCAGCCCCGAGGGCGCTAAGCCCGAGCCCTCCACTTCGTTTACACTGAAC TACAACTTCAAGAGTAAGAAGGTCAAGGTCAACCTGAACATTCAGATCAAGTCTGAGGCAAAGGTTGAGGCCGAC GACACACACAAAACGATAGAAGAGGACAGGAAGCTTCTGCTTCAATCTGCCATTGTTCGAATCATGAAGTCACGC AAGAAGATGAAGCATGTACAGCTTGTTCAGGAGGTTATCCAGCAGGTCAAATCCCGCTTCCCGCCTAAAATTCCC GACATCAAGAAGAACATTGAAGCCCTTATGGAGAAGGATTACATTGAGCGCATGGACGGCGATGAAATCTCGTAC ATTGCTTAA
Transcript	>Pro_DTO377G3_2\|g2073.t1 ATGAAGACCTACATGGCTCTGTACACGGCTGTCCATAACTTCTGCACATCCCAAAAAGCAGTCGCTAGTGGCCAA GGCCTACAAGGATCACGTGGGGCCCATCTGCTCGGCGAGGAACTTTACAAATTACTCGGCGAATACCTCTCGTCC CATCTGAATAAGGTCTACAAACAATCACAGAGCCACACCGAGGAAGGCCTTCTTGGCTTCTACATTCGCGAATGG TACCGCTATACGACCGCCGCCAAGTACGTGAACCACATTTTCCGCTACCTCAATCGGCACTGGGTCAAGCGTGAG ATCGACGAGGGCAAGAAAAATGTCTATGATGTTTACACTCTGCATTTGGTTAAATGGAAAACGGAATTTTTCGAA AAAGTCCATGAGAAGGTCATGGACGCTGTTCTGAATTTGATCGAGAAGCAACGGAATGGCGAAACCATCGAACAG TCCCAGATCAAAGCTATTGTGGACTCCTTCGTGTCACTGGGTCTGGATGAGAACGATAGCTCTAAGTCAACACTA GATGTCTATCGGCAGTACTTCCAGCAGCCGTTCATCCGTGCCACCAGAAGCTATTATGAAAATGAGTCACGGCAG TTCGTGGCCGAAAATAGTGTGGTGGAATACATGAAGAAGGCAGAAGCTCGTCTGGAAGAGGAGAAGCTCCGGGTC GGTCTGTATTTGCATCCAGATGTCACCAAGAGCTTGACCGATACCTGCCTGTCTGTTCTCGTCACTGCCCACTCA ACTTTGCTTCGCGACGAGTTCCAAGTCTTGCTGGATAACGAACGTCAGGACGATCTTGCTCGTATGTATCGACTC TTATCAAGGATCAAGGAAGGCTTGGATCCTCTGCGCGCGACCTTTGAGAACCACGTGAGACGGGCTGGTTTGGCT GCTGTCGAGAAGGTTGCTTCGGAGGGCGAAACACTCGAGCCCAAGTTGTATGTCGATGCCCTACTGCAAGTTCAC ACAAGGTACCAGAACTTGGTCGACGAGGCCTTTAATGGCGAGGCCGAGTTCGTGCGTTCCCTTGATAACGCCTGC CGAGAGTTCGTCAACCGAAACCGCGTCTGCAAGACGAGCTCTTCTAAGTCTCCCGAACTGCTGGCAAAATATACG GACTCACTGCTCAAGAAAGGATCCAAGTCGGCTGAAGAGTCGGAGCTTGAGGAGATGCTGGTGCAAATCATGACA GTCTTCAAGTACATCGAAGACAAAGACGTTTTCCAGAAGTTCTATTCCAAGAACCTCGCCAAACGTCTAGTCCAT GTGAGCTCTGTTTCTGACGATGCTGAAACAAGCATGATCAGCAAACTGAAGGAGGCGTGTGGTTTCGAATATACC AACAAGCTGCAACGCATGTTCCAGGACATGCAGATTTCCAAGGATCTTAATAACAACTACAAGGTCTGGCAGGAC AAAGTACTAGAGGATGAAGACCGAAAGAAAATGTGCGATGCCCACTTCCAAATCCTGGGAACTGGCTTCTGGCCC CTCAATGCCCCGACCACCCCATTCCTTGCGCCACCGGAGATAGTCAAGACCGCCGAACGGTTCCAGACATTTTAC TTTGACAAGCACAACGGCCGCAAGTTGACATGGCTGTGGCAGCTATGCAAGGGCGAAATCAAAGCTAACTACATC AAAAACGCCAAGGTGCCCTACACTTTCCAGGTGTCGACCTATCAGATGGGCATTCTTCTTCTCTTCAATGAAACC GACACTCTGTCCTACGGTGAGATCGAAAAGGCTACTACCCTAGCTACCGAAATCCTCGATCCCAACCTTAGCATC CTGCTCAAGGCCAAAGTCCTCATCGCCAGCCCCGAGGGCGCTAAGCCCGAGCCCTCCACTTCGTTTACACTGAAC TACAACTTCAAGAGTAAGAAGGTCAAGGTCAACCTGAACATTCAGATCAAGTCTGAGGCAAAGGTTGAGGCCGAC GACACACACAAAACGATAGAAGAGGACAGGAAGCTTCTGCTTCAATCTGCCATTGTTCGAATCATGAAGTCACGC AAGAAGATGAAGCATGTACAGCTTGTTCAGGAGGTTATCCAGCAGGTCAAATCCCGCTTCCCGCCTAAAATTCCC GACATCAAGAAGAACATTGAAGCCCTTATGGAGAAGGATTACATTGAGCGCATGGACGGCGATGAAATCTCGTAC ATTGCTTAA
Gene	>Pro_DTO377G3_2\|g2073.t1 ATGAAGACCGTAAGTGAAATGCCGAACGATCCCTGTCGATGAGGGTGTTTAAAAAATAGAAGCTTACTGGTTGTT TTTGTCTAGTACATGGCTCTGTACACGTGTGTTCAAGATTCAACACCACTTCTCTGACGAGAACCACACTCACAC ATTGATATTAGGGCTGTCCATAACTTCTGCACATCCCAAAAAGCAGTCGCTAGTGGCCAAGGCCTACAAGGATCA CGTGGGGGTTCGTTTTTCCCCCTGTATGCCAGTTCTCGATATGAGCTGACCTGGACCCAAGCCCATCTGCTCGGC GAGGAACTTTACAAATTACTCGGCGAATACCTCTCGTCCCATCTGAATAAGGTCTACAAACAATCACAGAGCCAC ACCGAGGAAGGCCTTCTTGGCTTCTACATTCGCGAATGGTACCGCTATACGACCGCCGCCAAGTACGTGAACCAC ATTTTCCGCTACCTCAATCGGCACTGGGTCAAGCGTGAGATCGACGAGGGCAAGAAAAATGTCTATGATGTTTAC ACTCTGCATTTGGTTAAATGGAAAACGGAATTTTTCGAAAAAGTCCATGAGAAGGTCATGGACGCTGTTCTGAAT TTGATCGAGAAGCAACGGAATGGCGAAACCATCGAACAGTCCCAGATCAAAGCTATTGTGGACTCCTTCGTGTCA CTGGGTCTGGATGAGAACGATAGCTCTAAGTCAACACTAGATGTCTATCGGCAGTACTTCCAGCAGCCGTTCATC CGTGCCACCAGAAGCTATTATGAAAATGAGTCACGGCAGTTCGTGGCCGAAAATAGTGTGGTGGAATACATGAAG AAGGCAGAAGCTCGTCTGGAAGAGGAGAAGCTCCGGGTCGGTCTGTATTTGCATCCAGATGTCACCAAGAGCTTG ACCGATACCTGCCTGTCTGTTCTCGTCACTGCCCACTCAACTTTGCTTCGCGACGAGTTCCAAGTCTTGCTGGAT AACGAACGTCAGGACGATCTTGCTCGTATGTATCGACTCTTATCAAGGATCAAGGAAGGCTTGGATCCTCTGCGC GCGACCTTTGAGAACCACGTGAGACGGGCTGGTTTGGCTGCTGTCGAGAAGGTTGCTTCGGAGGGCGAAACACTC GAGCCCAAGTTGTATGTCGATGCCCTACTGCAAGTTCACACAAGGTACCAGAACTTGGTCGACGAGGCCTTTAAT GGCGAGGCCGAGTTCGTGCGTTCCCTTGATAACGCCTGCCGAGAGTTCGTCAACCGAAACCGCGTCTGCAAGACG AGCTCTTCTAAGTCTCCCGAACTGCTGGCAAAATATACGGACTCACTGCTCAAGAAAGGATCCAAGTCGGCTGAA GAGTCGGAGCTTGAGGAGATGCTGGTGCAAATCATGACAGTCTTCAAGTACATCGAAGACAAAGACGTTTTCCAG AAGTTCTATTCCAAGAACCTCGCCAAACGTCTAGTCCATGTGAGCTCTGTTTCTGACGATGCTGAAACAAGCATG ATCAGCAAACTGAAGGAGGCGTGTGGTTTCGAATATACCAACAAGCTGCAACGCATGTTCCAGGACATGCAGATT TCCAAGGATCTTAATAACAACTACAAGGTCTGGCAGGACAAAGTACTAGAGGATGAAGACCGAAAGAAAATGTGC GATGCCCACTTCCAAATCCTGGGAACTGGCTTCTGGCCCCTCAATGCCCCGACCACCCCATTCCTTGCGCCACCG GAGATAGTCAAGACCGCCGAACGGTTCCAGACATTTTACTTTGACAAGCACAACGGCCGCAAGTTGACATGGCTG TGGCAGCTATGCAAGGGCGAAATCAAAGCTAACTACATCAAAAACGCCAAGGTGCCCTACACTTTCCAGGTGTCG ACCTATCAGATGGGCATTCTTCTTCTCTTCAATGAAACCGACACTCTGTCCTACGGTGAGATCGAAAAGGCTACT ACCCTAGCTACCGAAATCCTCGATCCCAACCTTAGCATCCTGCTCAAGGCCAAAGTCCTCATCGCCAGCCCCGAG GGCGCTAAGCCCGAGCCCTCCACTTCGTTTACACTGAACTACAACTTCAAGAGTAAGAAGGTCAAGGTCAACCTG AACATTCAGATCAAGTCTGAGGCAAAGGTTGAGGCCGACGACACACACAAAACGATAGAAGAGGACAGGAAGCTT CTGCTTCAAGTATGTCTCCTACCTAATCATCACTCCCCACACAGTCTATTTGTCCTAACCTTGCTATAGTCTGCC ATTGTTCGAATCATGAAGTCACGCAAGAAGATGAAGCATGTACAGCTTGTTCAGGAGGTTATCCAGCAGGTCAAA TCCCGCTTCCCGCCTAAAATTCCCGACATCAAGAAGAACATTGAAGCCCTTATGGAGAAGGATTACATTGAGCGC ATGGACGGCGATGAAATCTCGTACATTGCTTAA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences