Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2071.t1
Gene name
Locationscaffold_02:1586306..1586843
Strand-
Gene length (bp)537
Transcript length (bp)537
Coding sequence length (bp)537
Protein length (aa) 179

Your browser does not support drawing a protein figure.

PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07883 Cupin_2 Cupin domain 1.9E-06 67 118
PF00190 Cupin_1 Cupin 6.5E-05 68 116

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 44 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2071.t1
MAITPQSDIQVTTRQIPEWQRIPNTSIQSKPLMIYHGAFNATATELEDHLEAVGEVVPQWVFSMYTQTHFHSTTP
EVLGVVSGRARLCFGGGKNPGRFEPTVQRGDFIIVPAGVGHRLLEDLHWNQEEFQMVGAYPLGKQWDMCYGRPEE
EAKLRRIKDVAWFRQDPLYGGDGPAMHV*
Coding >Pro_DTO377G3_2|g2071.t1
ATGGCCATAACTCCACAGTCAGACATTCAAGTGACCACTCGCCAAATCCCCGAGTGGCAACGTATACCGAACACT
TCGATCCAATCCAAGCCGCTCATGATATACCATGGGGCCTTCAATGCCACAGCTACAGAGCTCGAAGATCACCTG
GAGGCAGTAGGCGAGGTTGTTCCTCAGTGGGTGTTTAGCATGTACACCCAAACCCACTTTCACTCCACAACGCCA
GAGGTGCTCGGGGTCGTTTCAGGGAGAGCACGTCTGTGTTTTGGAGGCGGAAAGAACCCCGGACGATTTGAGCCA
ACGGTACAGCGCGGTGATTTTATCATTGTGCCTGCGGGCGTGGGTCATCGACTTTTAGAGGACCTGCACTGGAAT
CAGGAAGAGTTCCAAATGGTGGGCGCATATCCACTCGGAAAACAGTGGGATATGTGTTATGGGAGGCCAGAAGAG
GAAGCAAAGTTGCGGAGAATCAAGGATGTGGCGTGGTTCCGTCAAGATCCATTGTATGGTGGTGACGGCCCTGCC
ATGCACGTCTAA
Transcript >Pro_DTO377G3_2|g2071.t1
ATGGCCATAACTCCACAGTCAGACATTCAAGTGACCACTCGCCAAATCCCCGAGTGGCAACGTATACCGAACACT
TCGATCCAATCCAAGCCGCTCATGATATACCATGGGGCCTTCAATGCCACAGCTACAGAGCTCGAAGATCACCTG
GAGGCAGTAGGCGAGGTTGTTCCTCAGTGGGTGTTTAGCATGTACACCCAAACCCACTTTCACTCCACAACGCCA
GAGGTGCTCGGGGTCGTTTCAGGGAGAGCACGTCTGTGTTTTGGAGGCGGAAAGAACCCCGGACGATTTGAGCCA
ACGGTACAGCGCGGTGATTTTATCATTGTGCCTGCGGGCGTGGGTCATCGACTTTTAGAGGACCTGCACTGGAAT
CAGGAAGAGTTCCAAATGGTGGGCGCATATCCACTCGGAAAACAGTGGGATATGTGTTATGGGAGGCCAGAAGAG
GAAGCAAAGTTGCGGAGAATCAAGGATGTGGCGTGGTTCCGTCAAGATCCATTGTATGGTGGTGACGGCCCTGCC
ATGCACGTCTAA
Gene >Pro_DTO377G3_2|g2071.t1
ATGGCCATAACTCCACAGTCAGACATTCAAGTGACCACTCGCCAAATCCCCGAGTGGCAACGTATACCGAACACT
TCGATCCAATCCAAGCCGCTCATGATATACCATGGGGCCTTCAATGCCACAGCTACAGAGCTCGAAGATCACCTG
GAGGCAGTAGGCGAGGTTGTTCCTCAGTGGGTGTTTAGCATGTACACCCAAACCCACTTTCACTCCACAACGCCA
GAGGTGCTCGGGGTCGTTTCAGGGAGAGCACGTCTGTGTTTTGGAGGCGGAAAGAACCCCGGACGATTTGAGCCA
ACGGTACAGCGCGGTGATTTTATCATTGTGCCTGCGGGCGTGGGTCATCGACTTTTAGAGGACCTGCACTGGAAT
CAGGAAGAGTTCCAAATGGTGGGCGCATATCCACTCGGAAAACAGTGGGATATGTGTTATGGGAGGCCAGAAGAG
GAAGCAAAGTTGCGGAGAATCAAGGATGTGGCGTGGTTCCGTCAAGATCCATTGTATGGTGGTGACGGCCCTGCC
ATGCACGTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

Built with Python Django and Wagtail