Protein ID | Pro_DTO377G3_2|g2060.t1 |
Gene name | |
Location | scaffold_02:1561216..1562901 |
Strand | - |
Gene length (bp) | 1685 |
Transcript length (bp) | 1374 |
Coding sequence length (bp) | 1374 |
Protein length (aa) | 458 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF00091 | Tubulin | Tubulin/FtsZ family, GTPase domain | 2.0E-68 | 4 | 214 |
PF03953 | Tubulin_C | Tubulin C-terminal domain | 6.2E-43 | 264 | 392 |
PF10644 | Misat_Tub_SegII | Misato Segment II tubulin-like domain | 6.9E-08 | 3 | 75 |
GO Term | Description | Terminal node |
---|---|---|
GO:0003924 | GTPase activity | Yes |
GO:0017111 | nucleoside-triphosphatase activity | No |
GO:0016817 | hydrolase activity, acting on acid anhydrides | No |
GO:0016787 | hydrolase activity | No |
GO:0003824 | catalytic activity | No |
GO:0016462 | pyrophosphatase activity | No |
GO:0016818 | hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides | No |
GO:0003674 | molecular_function | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 34 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g2060.t1 MPREIITIQAGQCGNNVGSQFWQQLCQEHGISADGNLEEHATDGAAGDRKDVFFYQSDDTRYIPRAILLDLEPRV LNAIQTGPYKNIYNPENFFVGQQGIGAGNNWGTGYAAGEGVQEEIFDMIDREADGSDSLEGFMLLHSIAGGTGSG LGSFILERMNDRFPKKLIQTYSVFPDTQSDVVVNPYNSLLAMRRLTQDADSVVVLDNGALSRIVADRLHVQEPSF HQTNQLVSTVMSASTTTLRYPGYMHNDLAGIIASLIPTPRSHFLLTSYTPFTGANIEQARTVRKTTVLDVMRRLL QPKNRMVSVNPSKSSCYISILNIIQGEADPTDVHKSLLRIRERRLATFIPWGPASIQVALTKKSPYIEETGHRVS GLMLANHTSVATLFKRIVKHYDMLRKRNAFLDSYKKEAPFADGLGEFDEARAVVMDLIGEYEAAEREDYLDPDAG KANELGV* |
Coding | >Pro_DTO377G3_2|g2060.t1 ATGCCAAGAGAAATCATCACAATCCAAGCCGGCCAGTGCGGCAACAACGTTGGCAGCCAGTTCTGGCAGCAGCTG TGCCAGGAGCACGGGATCAGCGCAGATGGAAACCTGGAGGAGCATGCGACTGACGGGGCGGCCGGTGATCGCAAG GATGTCTTCTTCTACCAGAGTGACGACACAAGGTACATCCCTCGAGCGATTCTCCTCGACTTAGAACCCAGGGTC CTCAACGCCATCCAGACTGGCCCCTACAAGAATATCTACAACCCCGAGAACTTCTTCGTCGGACAACAAGGTATC GGAGCTGGAAACAATTGGGGTACCGGATATGCTGCAGGCGAGGGCGTGCAAGAGGAGATTTTCGATATGATTGAC CGCGAAGCAGACGGAAGTGACTCACTAGAGGGTTTTATGCTTCTACATTCGATCGCAGGAGGAACAGGCTCTGGA CTGGGTAGTTTCATCCTCGAACGCATGAACGATCGATTCCCGAAGAAACTCATTCAAACCTACTCTGTCTTCCCG GACACGCAGTCCGATGTCGTCGTCAACCCTTACAACAGCTTGCTGGCCATGCGCCGATTGACCCAGGATGCCGAC TCCGTGGTCGTCCTGGACAATGGCGCTCTGTCACGAATTGTCGCTGATCGGCTGCACGTCCAAGAGCCCTCGTTC CACCAAACCAACCAACTCGTTTCTACGGTGATGTCTGCATCTACAACCACGCTCCGATACCCTGGATACATGCAC AACGATCTCGCCGGGATCATCGCCTCGCTCATCCCCACGCCACGCAGCCACTTCCTTCTCACATCATACACACCG TTCACGGGCGCCAACATCGAGCAAGCCAGGACGGTGCGAAAGACCACCGTCCTAGACGTCATGCGCCGTCTTCTA CAGCCTAAGAACCGCATGGTCTCGGTCAACCCCAGCAAGTCCAGCTGCTACATCAGCATCCTCAACATCATCCAG GGCGAAGCCGACCCGACCGACGTGCACAAGTCACTCCTGCGCATCCGGGAGCGTCGCCTCGCTACCTTCATCCCC TGGGGCCCTGCCAGTATCCAGGTGGCTCTCACAAAGAAATCGCCGTATATTGAGGAAACCGGACATCGCGTCAGC GGGCTGATGCTGGCCAACCACACCTCTGTCGCGACACTCTTCAAGCGCATTGTGAAGCACTACGACATGCTCCGC AAGCGAAATGCGTTCTTGGATTCCTACAAGAAGGAAGCTCCGTTTGCTGACGGACTTGGCGAATTTGACGAGGCA CGGGCGGTTGTGATGGATCTGATCGGCGAGTACGAGGCAGCGGAGCGAGAGGACTACTTGGACCCGGATGCAGGC AAGGCAAACGAGCTCGGAGTCTGA |
Transcript | >Pro_DTO377G3_2|g2060.t1 ATGCCAAGAGAAATCATCACAATCCAAGCCGGCCAGTGCGGCAACAACGTTGGCAGCCAGTTCTGGCAGCAGCTG TGCCAGGAGCACGGGATCAGCGCAGATGGAAACCTGGAGGAGCATGCGACTGACGGGGCGGCCGGTGATCGCAAG GATGTCTTCTTCTACCAGAGTGACGACACAAGGTACATCCCTCGAGCGATTCTCCTCGACTTAGAACCCAGGGTC CTCAACGCCATCCAGACTGGCCCCTACAAGAATATCTACAACCCCGAGAACTTCTTCGTCGGACAACAAGGTATC GGAGCTGGAAACAATTGGGGTACCGGATATGCTGCAGGCGAGGGCGTGCAAGAGGAGATTTTCGATATGATTGAC CGCGAAGCAGACGGAAGTGACTCACTAGAGGGTTTTATGCTTCTACATTCGATCGCAGGAGGAACAGGCTCTGGA CTGGGTAGTTTCATCCTCGAACGCATGAACGATCGATTCCCGAAGAAACTCATTCAAACCTACTCTGTCTTCCCG GACACGCAGTCCGATGTCGTCGTCAACCCTTACAACAGCTTGCTGGCCATGCGCCGATTGACCCAGGATGCCGAC TCCGTGGTCGTCCTGGACAATGGCGCTCTGTCACGAATTGTCGCTGATCGGCTGCACGTCCAAGAGCCCTCGTTC CACCAAACCAACCAACTCGTTTCTACGGTGATGTCTGCATCTACAACCACGCTCCGATACCCTGGATACATGCAC AACGATCTCGCCGGGATCATCGCCTCGCTCATCCCCACGCCACGCAGCCACTTCCTTCTCACATCATACACACCG TTCACGGGCGCCAACATCGAGCAAGCCAGGACGGTGCGAAAGACCACCGTCCTAGACGTCATGCGCCGTCTTCTA CAGCCTAAGAACCGCATGGTCTCGGTCAACCCCAGCAAGTCCAGCTGCTACATCAGCATCCTCAACATCATCCAG GGCGAAGCCGACCCGACCGACGTGCACAAGTCACTCCTGCGCATCCGGGAGCGTCGCCTCGCTACCTTCATCCCC TGGGGCCCTGCCAGTATCCAGGTGGCTCTCACAAAGAAATCGCCGTATATTGAGGAAACCGGACATCGCGTCAGC GGGCTGATGCTGGCCAACCACACCTCTGTCGCGACACTCTTCAAGCGCATTGTGAAGCACTACGACATGCTCCGC AAGCGAAATGCGTTCTTGGATTCCTACAAGAAGGAAGCTCCGTTTGCTGACGGACTTGGCGAATTTGACGAGGCA CGGGCGGTTGTGATGGATCTGATCGGCGAGTACGAGGCAGCGGAGCGAGAGGACTACTTGGACCCGGATGCAGGC AAGGCAAACGAGCTCGGAGTCTGA |
Gene | >Pro_DTO377G3_2|g2060.t1 ATGCCAAGGTTTGTTCATTCTTCCGAGTCAAGCATAATTGACAGGTCTCTCTCCAGCTTGAATACCGATGCTGAT ATTGGTGGCAATTGCAGAGAAATCATCACAATCCAAGCCGGCCAGTGCGGCAACAACGGTATGTGGCTCAACTCT GCGATCCATTCCACGATCGTTGATCTAGTCATTTGAAACGGAGCACGAGAAAATATAGTTCACGTCTAACATTCG TTCTATCTAGTTGGCAGCCAGTTCTGGCAGCAGCTGTGCCAGGAGCACGGGATCAGCGCAGATGGAAACCTGGAG GAGCATGCGACTGACGGGGCGGCCGGTGATCGCAAGGATGTCTTCTTCTACCAGGTGTGTATAGGAAGCTTGCGA GGAAAATATAGGCTTGGTGGACAAGAACACTGGCTAACATATGGCAGAGTGACGACACAAGGTACATCCCTCGAG CGATTCTCCTCGACTTAGAACCCAGGGTAGGCCTCACCGATATATCAAATCGACCACGATGATTAACGCATAGAT TGTTCCAGGTCCTCAACGCCATCCAGACTGGCCCCTACAAGAATATCTACAACCCCGAGAACTTCTTCGTCGGAC AACAAGGTATCGGAGCTGGAAACAATTGGGGTACCGGATATGCTGCAGGCGAGGGCGTGCAAGAGGAGATTTTCG ATATGATTGACCGCGAAGCAGACGGAAGTGACTCACTAGAGGGTTTTATGCTTCTACATTCGATCGCAGGAGGAA CAGGCTCTGGACTGGGTAGTTTCATCCTCGAACGCATGAACGATCGATTCCCGAAGAAACTCATTCAAACCTACT CTGTCTTCCCGGACACGCAGTCCGATGTCGTCGTCAACCCTTACAACAGCTTGCTGGCCATGCGCCGATTGACCC AGGATGCCGACTCCGTGGTCGTCCTGGACAATGGCGCTCTGTCACGAATTGTCGCTGATCGGCTGCACGTCCAAG AGCCCTCGTTCCACCAAACCAACCAACTCGTTTCTACGGTGATGTCTGCATCTACAACCACGCTCCGATACCCTG GATACATGCACAACGATCTCGCCGGGATCATCGCCTCGCTCATCCCCACGCCACGCAGCCACTTCCTTCTCACAT CATACACACCGTTCACGGGCGCCAACATCGAGCAAGCCAGGACGGTGCGAAAGACCACCGTCCTAGACGTCATGC GCCGTCTTCTACAGCCTAAGAACCGCATGGTCTCGGTCAACCCCAGCAAGTCCAGCTGCTACATCAGCATCCTCA ACATCATCCAGGGCGAAGCCGACCCGACCGACGTGCACAAGTCACTCCTGCGCATCCGGGAGCGTCGCCTCGCTA CCTTCATCCCCTGGGGCCCTGCCAGTATCCAGGTGGCTCTCACAAAGAAATCGCCGTATATTGAGGAAACCGGAC ATCGCGTCAGCGGGCTGATGCTGGCCAACCACACCTCTGTCGCGACACTCTTCAAGCGCATTGTGAAGCACTACG ACATGCTCCGCAAGCGAAATGCGTTCTTGGATTCCTACAAGAAGGAAGCTCCGTTTGCTGACGGACTTGGCGAAT TTGACGAGGCACGGGCGGTTGTGATGGATCTGATCGGCGAGTACGAGGCAGCGGAGCGAGAGGACTACTTGGACC CGGATGCAGGCAAGGCAAACGAGCTCGGAGTCTGA |