© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g2052.t1 |
| Gene name | |
| Location | scaffold_02:1545925..1547025 |
| Strand | - |
| Gene length (bp) | 1100 |
| Transcript length (bp) | 936 |
| Coding sequence length (bp) | 936 |
| Protein length (aa) | 312 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF03446 | NAD_binding_2 | NAD binding domain of 6-phosphogluconate dehydrogenase | 1.9E-27 | 3 | 166 |
| PF14833 | NAD_binding_11 | NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase | 1.5E-13 | 174 | 293 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0050661 | NADP binding | Yes |
| GO:0051287 | NAD binding | Yes |
| GO:1901265 | nucleoside phosphate binding | No |
| GO:0097159 | organic cyclic compound binding | No |
| GO:0005488 | binding | No |
| GO:0000166 | nucleotide binding | No |
| GO:1901363 | heterocyclic compound binding | No |
| GO:0003674 | molecular_function | No |
| GO:0036094 | small molecule binding | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 18 | 0.45 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g2052.t1 MPQIGWYGLGSMGLAMASNLQRHLATKKALSLIYSNRTMSRGAPLQALGAIPVANFEKLVSQCGIIFTMISNDAV LQSLLSTAMGSSQSLKDKIFVDCSTVHPDTVKSAVSELKSKGASYVAAPVFGGNPIAVDGKLVFAIGGPKSATDA VKPLIQDVMGRRVIDCGEDATKASLLKIAGNIVTVNMMEAVGEAQVFAEKTGLGTGPMEELIGEAFGAVAGGYSK RLTTGAYAPPLDSHPGFGVSLAIKDARHAMSMAQDQGVELPGLEIAKTNMEAAREYGGECLDSSSMYGILRQKAG LAFWNEKSRKE* |
| Coding | >Pro_DTO377G3_2|g2052.t1 ATGCCACAAATCGGCTGGTATGGACTCGGGTCCATGGGCCTAGCAATGGCCTCCAATCTGCAGCGCCACCTAGCC ACGAAGAAGGCCTTGAGCCTGATCTACTCGAACCGCACGATGTCGCGCGGAGCACCCCTGCAAGCACTGGGTGCA ATCCCAGTAGCCAATTTCGAGAAGTTGGTGTCTCAATGTGGAATTATTTTCACCATGATCTCGAATGACGCAGTC CTCCAAAGCCTGCTATCCACCGCCATGGGTTCAAGCCAGTCCTTGAAAGACAAGATCTTCGTCGACTGCTCAACA GTGCATCCCGATACTGTAAAATCGGCTGTATCGGAGCTGAAAAGCAAGGGTGCATCGTACGTAGCAGCGCCGGTC TTCGGCGGGAACCCAATTGCCGTGGATGGCAAACTTGTTTTTGCCATTGGTGGCCCGAAGAGTGCGACTGATGCC GTCAAACCTCTGATCCAGGATGTTATGGGTCGGCGCGTGATTGATTGCGGTGAGGATGCGACAAAGGCTTCCCTT CTGAAAATCGCGGGTAACATTGTTACTGTTAACATGATGGAGGCTGTTGGTGAGGCTCAGGTCTTTGCCGAGAAG ACCGGACTTGGAACTGGTCCTATGGAAGAACTCATTGGCGAGGCTTTTGGTGCTGTTGCCGGAGGGTATTCTAAG AGATTGACTACCGGTGCTTATGCGCCGCCCCTGGACTCTCATCCTGGATTTGGTGTTTCTCTTGCTATCAAGGAT GCTAGACATGCTATGTCAATGGCCCAGGATCAGGGTGTTGAGCTTCCTGGCCTTGAGATTGCCAAGACTAACATG GAGGCTGCGAGAGAATATGGCGGAGAGTGCCTGGATAGCAGTTCGATGTACGGAATTCTACGCCAGAAGGCTGGT CTGGCGTTTTGGAATGAGAAGAGCAGGAAAGAGTAA |
| Transcript | >Pro_DTO377G3_2|g2052.t1 ATGCCACAAATCGGCTGGTATGGACTCGGGTCCATGGGCCTAGCAATGGCCTCCAATCTGCAGCGCCACCTAGCC ACGAAGAAGGCCTTGAGCCTGATCTACTCGAACCGCACGATGTCGCGCGGAGCACCCCTGCAAGCACTGGGTGCA ATCCCAGTAGCCAATTTCGAGAAGTTGGTGTCTCAATGTGGAATTATTTTCACCATGATCTCGAATGACGCAGTC CTCCAAAGCCTGCTATCCACCGCCATGGGTTCAAGCCAGTCCTTGAAAGACAAGATCTTCGTCGACTGCTCAACA GTGCATCCCGATACTGTAAAATCGGCTGTATCGGAGCTGAAAAGCAAGGGTGCATCGTACGTAGCAGCGCCGGTC TTCGGCGGGAACCCAATTGCCGTGGATGGCAAACTTGTTTTTGCCATTGGTGGCCCGAAGAGTGCGACTGATGCC GTCAAACCTCTGATCCAGGATGTTATGGGTCGGCGCGTGATTGATTGCGGTGAGGATGCGACAAAGGCTTCCCTT CTGAAAATCGCGGGTAACATTGTTACTGTTAACATGATGGAGGCTGTTGGTGAGGCTCAGGTCTTTGCCGAGAAG ACCGGACTTGGAACTGGTCCTATGGAAGAACTCATTGGCGAGGCTTTTGGTGCTGTTGCCGGAGGGTATTCTAAG AGATTGACTACCGGTGCTTATGCGCCGCCCCTGGACTCTCATCCTGGATTTGGTGTTTCTCTTGCTATCAAGGAT GCTAGACATGCTATGTCAATGGCCCAGGATCAGGGTGTTGAGCTTCCTGGCCTTGAGATTGCCAAGACTAACATG GAGGCTGCGAGAGAATATGGCGGAGAGTGCCTGGATAGCAGTTCGATGTACGGAATTCTACGCCAGAAGGCTGGT CTGGCGTTTTGGAATGAGAAGAGCAGGAAAGAGTAA |
| Gene | >Pro_DTO377G3_2|g2052.t1 ATGCCACAAATCGGCTGGGTAATCAGCCTCTAGAGCACCTACAATTATGAACAAAGAACTAACAAAACACAGTAT GGACTCGGGTCCATGGGCCTAGCAATGGCCTCCAATCTGCAGCGCCACCTAGCCACGAAGAAGGCCTTGAGCCTG ATCTACTCGAACCGCACGATGTCGCGCGGAGCACCCCTGCAAGCACTGGGTGCAATCCCAGTAGCCAATTTCGAG AAGTTGGTGTCTCAATGTGGAATTATTTTCACCATGGTAAGCGGATTCCACCGAGAAATACATAGCAATGTCTAA AGCCTCTTCCAGATCTCGAATGACGCAGTCCTCCAAAGCCTGCTATCCACCGCCATGGGTTCAAGCCAGTCCTTG AAAGACAAGATCTTCGTCGACTGCTCAACAGTGCATCCCGATACTGTAAAATCGGCTGTATCGGAGCTGAAAAGC AAGGGTGCATCGTACGTAGCAGCGCCGGTCTTCGGCGGGAACCCAATTGCCGTGGATGGCAAACTTGTTTTTGCC ATTGGTGGCCCGAAGAGTGCGACTGATGCCGTCAAACCTCTGATCCAGGATGTTATGGGTCGGCGCGTGATTGAT TGCGGTGAGGATGCGACAAAGGCTTCCCTTCTGAAAATCGCGGGTAACATTGTTACTGTTAACATGATGGAGGCT GTTGGTGAGGCTCAGGTCTTTGCCGAGAAGACCGGACTTGGAACTGGTCCTATGGAAGAACTCATTGGCGAGGCT TTTGGTGCTGTTGCCGGAGGGTATTCTAAGAGGTGTGTTACAGTATTTTTTCGGTGCTGGCATGGCGTTTCATAC TTATCTTTGTTTCCAGATTGACTACCGGTGCTTATGCGCCGCCCCTGGACTCTCATCCTGGATTTGGTGTTTCTC TTGCTATCAAGGATGCTAGACATGCTATGTCAATGGCCCAGGATCAGGGTGTTGAGCTTCCTGGCCTTGAGATTG CCAAGACTAACATGGAGGCTGCGAGAGAATATGGCGGAGAGTGCCTGGATAGCAGTTCGATGTACGGAATTCTAC GCCAGAAGGCTGGTCTGGCGTTTTGGAATGAGAAGAGCAGGAAAGAGTAA |