Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2052.t1
Gene name
Locationscaffold_02:1545925..1547025
Strand-
Gene length (bp)1100
Transcript length (bp)936
Coding sequence length (bp)936
Protein length (aa) 312

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF03446 NAD_binding_2 NAD binding domain of 6-phosphogluconate dehydrogenase 1.9E-27 3 166
PF14833 NAD_binding_11 NAD-binding of NADP-dependent 3-hydroxyisobutyrate dehydrogenase 1.5E-13 174 293

GO

GO Term Description Terminal node
GO:0050661 NADP binding Yes
GO:0051287 NAD binding Yes
GO:1901265 nucleoside phosphate binding No
GO:0097159 organic cyclic compound binding No
GO:0005488 binding No
GO:0000166 nucleotide binding No
GO:1901363 heterocyclic compound binding No
GO:0003674 molecular_function No
GO:0036094 small molecule binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 18 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2052.t1
MPQIGWYGLGSMGLAMASNLQRHLATKKALSLIYSNRTMSRGAPLQALGAIPVANFEKLVSQCGIIFTMISNDAV
LQSLLSTAMGSSQSLKDKIFVDCSTVHPDTVKSAVSELKSKGASYVAAPVFGGNPIAVDGKLVFAIGGPKSATDA
VKPLIQDVMGRRVIDCGEDATKASLLKIAGNIVTVNMMEAVGEAQVFAEKTGLGTGPMEELIGEAFGAVAGGYSK
RLTTGAYAPPLDSHPGFGVSLAIKDARHAMSMAQDQGVELPGLEIAKTNMEAAREYGGECLDSSSMYGILRQKAG
LAFWNEKSRKE*
Coding >Pro_DTO377G3_2|g2052.t1
ATGCCACAAATCGGCTGGTATGGACTCGGGTCCATGGGCCTAGCAATGGCCTCCAATCTGCAGCGCCACCTAGCC
ACGAAGAAGGCCTTGAGCCTGATCTACTCGAACCGCACGATGTCGCGCGGAGCACCCCTGCAAGCACTGGGTGCA
ATCCCAGTAGCCAATTTCGAGAAGTTGGTGTCTCAATGTGGAATTATTTTCACCATGATCTCGAATGACGCAGTC
CTCCAAAGCCTGCTATCCACCGCCATGGGTTCAAGCCAGTCCTTGAAAGACAAGATCTTCGTCGACTGCTCAACA
GTGCATCCCGATACTGTAAAATCGGCTGTATCGGAGCTGAAAAGCAAGGGTGCATCGTACGTAGCAGCGCCGGTC
TTCGGCGGGAACCCAATTGCCGTGGATGGCAAACTTGTTTTTGCCATTGGTGGCCCGAAGAGTGCGACTGATGCC
GTCAAACCTCTGATCCAGGATGTTATGGGTCGGCGCGTGATTGATTGCGGTGAGGATGCGACAAAGGCTTCCCTT
CTGAAAATCGCGGGTAACATTGTTACTGTTAACATGATGGAGGCTGTTGGTGAGGCTCAGGTCTTTGCCGAGAAG
ACCGGACTTGGAACTGGTCCTATGGAAGAACTCATTGGCGAGGCTTTTGGTGCTGTTGCCGGAGGGTATTCTAAG
AGATTGACTACCGGTGCTTATGCGCCGCCCCTGGACTCTCATCCTGGATTTGGTGTTTCTCTTGCTATCAAGGAT
GCTAGACATGCTATGTCAATGGCCCAGGATCAGGGTGTTGAGCTTCCTGGCCTTGAGATTGCCAAGACTAACATG
GAGGCTGCGAGAGAATATGGCGGAGAGTGCCTGGATAGCAGTTCGATGTACGGAATTCTACGCCAGAAGGCTGGT
CTGGCGTTTTGGAATGAGAAGAGCAGGAAAGAGTAA
Transcript >Pro_DTO377G3_2|g2052.t1
ATGCCACAAATCGGCTGGTATGGACTCGGGTCCATGGGCCTAGCAATGGCCTCCAATCTGCAGCGCCACCTAGCC
ACGAAGAAGGCCTTGAGCCTGATCTACTCGAACCGCACGATGTCGCGCGGAGCACCCCTGCAAGCACTGGGTGCA
ATCCCAGTAGCCAATTTCGAGAAGTTGGTGTCTCAATGTGGAATTATTTTCACCATGATCTCGAATGACGCAGTC
CTCCAAAGCCTGCTATCCACCGCCATGGGTTCAAGCCAGTCCTTGAAAGACAAGATCTTCGTCGACTGCTCAACA
GTGCATCCCGATACTGTAAAATCGGCTGTATCGGAGCTGAAAAGCAAGGGTGCATCGTACGTAGCAGCGCCGGTC
TTCGGCGGGAACCCAATTGCCGTGGATGGCAAACTTGTTTTTGCCATTGGTGGCCCGAAGAGTGCGACTGATGCC
GTCAAACCTCTGATCCAGGATGTTATGGGTCGGCGCGTGATTGATTGCGGTGAGGATGCGACAAAGGCTTCCCTT
CTGAAAATCGCGGGTAACATTGTTACTGTTAACATGATGGAGGCTGTTGGTGAGGCTCAGGTCTTTGCCGAGAAG
ACCGGACTTGGAACTGGTCCTATGGAAGAACTCATTGGCGAGGCTTTTGGTGCTGTTGCCGGAGGGTATTCTAAG
AGATTGACTACCGGTGCTTATGCGCCGCCCCTGGACTCTCATCCTGGATTTGGTGTTTCTCTTGCTATCAAGGAT
GCTAGACATGCTATGTCAATGGCCCAGGATCAGGGTGTTGAGCTTCCTGGCCTTGAGATTGCCAAGACTAACATG
GAGGCTGCGAGAGAATATGGCGGAGAGTGCCTGGATAGCAGTTCGATGTACGGAATTCTACGCCAGAAGGCTGGT
CTGGCGTTTTGGAATGAGAAGAGCAGGAAAGAGTAA
Gene >Pro_DTO377G3_2|g2052.t1
ATGCCACAAATCGGCTGGGTAATCAGCCTCTAGAGCACCTACAATTATGAACAAAGAACTAACAAAACACAGTAT
GGACTCGGGTCCATGGGCCTAGCAATGGCCTCCAATCTGCAGCGCCACCTAGCCACGAAGAAGGCCTTGAGCCTG
ATCTACTCGAACCGCACGATGTCGCGCGGAGCACCCCTGCAAGCACTGGGTGCAATCCCAGTAGCCAATTTCGAG
AAGTTGGTGTCTCAATGTGGAATTATTTTCACCATGGTAAGCGGATTCCACCGAGAAATACATAGCAATGTCTAA
AGCCTCTTCCAGATCTCGAATGACGCAGTCCTCCAAAGCCTGCTATCCACCGCCATGGGTTCAAGCCAGTCCTTG
AAAGACAAGATCTTCGTCGACTGCTCAACAGTGCATCCCGATACTGTAAAATCGGCTGTATCGGAGCTGAAAAGC
AAGGGTGCATCGTACGTAGCAGCGCCGGTCTTCGGCGGGAACCCAATTGCCGTGGATGGCAAACTTGTTTTTGCC
ATTGGTGGCCCGAAGAGTGCGACTGATGCCGTCAAACCTCTGATCCAGGATGTTATGGGTCGGCGCGTGATTGAT
TGCGGTGAGGATGCGACAAAGGCTTCCCTTCTGAAAATCGCGGGTAACATTGTTACTGTTAACATGATGGAGGCT
GTTGGTGAGGCTCAGGTCTTTGCCGAGAAGACCGGACTTGGAACTGGTCCTATGGAAGAACTCATTGGCGAGGCT
TTTGGTGCTGTTGCCGGAGGGTATTCTAAGAGGTGTGTTACAGTATTTTTTCGGTGCTGGCATGGCGTTTCATAC
TTATCTTTGTTTCCAGATTGACTACCGGTGCTTATGCGCCGCCCCTGGACTCTCATCCTGGATTTGGTGTTTCTC
TTGCTATCAAGGATGCTAGACATGCTATGTCAATGGCCCAGGATCAGGGTGTTGAGCTTCCTGGCCTTGAGATTG
CCAAGACTAACATGGAGGCTGCGAGAGAATATGGCGGAGAGTGCCTGGATAGCAGTTCGATGTACGGAATTCTAC
GCCAGAAGGCTGGTCTGGCGTTTTGGAATGAGAAGAGCAGGAAAGAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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