Protein ID | Pro_DTO377G3_2|g2048.t1 |
Gene name | |
Location | scaffold_02:1537964..1539563 |
Strand | - |
Gene length (bp) | 1599 |
Transcript length (bp) | 1377 |
Coding sequence length (bp) | 1377 |
Protein length (aa) | 459 |
PFAM Domain ID | Short name | Long name | E-value | Start | End |
---|---|---|---|---|---|
PF20511 | PMI_typeI_cat | Phosphomannose isomerase type I, catalytic domain | 1.3E-61 | 5 | 151 |
PF20512 | PMI_typeI_hel | Phosphomannose isomerase type I, helical insertion domain | 3.0E-22 | 167 | 272 |
PF01238 | PMI_typeI_C | Phosphomannose isomerase type I C-terminal | 2.4E-14 | 362 | 408 |
GO Term | Description | Terminal node |
---|---|---|
GO:0004476 | mannose-6-phosphate isomerase activity | Yes |
GO:0008270 | zinc ion binding | Yes |
GO:0005975 | carbohydrate metabolic process | Yes |
GO:0046872 | metal ion binding | No |
GO:0016861 | intramolecular oxidoreductase activity, interconverting aldoses and ketoses | No |
GO:0003674 | molecular_function | No |
GO:0003824 | catalytic activity | No |
GO:0016853 | isomerase activity | No |
GO:0043169 | cation binding | No |
GO:0071704 | organic substance metabolic process | No |
GO:0046914 | transition metal ion binding | No |
GO:0016860 | intramolecular oxidoreductase activity | No |
GO:0008152 | metabolic process | No |
GO:0043167 | ion binding | No |
GO:0005488 | binding | No |
GO:0008150 | biological_process | No |
GO:0044238 | primary metabolic process | No |
SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
---|---|---|
No | 1 - 11 | 0.45 |
Type of sequence | Sequence |
---|---|
Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
Protein | >Pro_DTO377G3_2|g2048.t1 MQIPLLRLQCGVNSYDWGKVGQESAAAKYAATTAAPDFTIESDKPYAELWMGTHPSLPSKDVETQRTLLDMVQDN QALLSTDVSERFGGKLPFLFKVLSIRKALSIQAHPNKKLAEQLHARDPKNYPDDNHKPEMTIAITPFEGMCGFRP LAEITHFLQAVEPLRTLVGNQAASEFEQIVKGNENSEEPAVIRKNKEALRSLFTTLMESSSEKIETACKNLISAA DNSPDSFATLAGDVETNPTNPAELAALAKRLNGQFPNDIGLFVFFFLNFVKLQPGEGMFLKADDIHAYISGDVIE CMASSDNVVRAGFTPKFKDVDTLTQMLTYSYAPIEEQKIQATDYPYAILNATAYSSASSVMLYDPPIDEFSVIKA DLNRTGAKATFDPIDGPSIFICTRGKGKITVSNKTEEVKEGYVFFVGATAECVIENTGSGEGDDDVFTTYKAFCE LTPTGEEN* |
Coding | >Pro_DTO377G3_2|g2048.t1 ATGCAGATACCACTACTTCGGCTGCAATGCGGCGTCAATAGCTACGACTGGGGCAAGGTTGGCCAAGAGTCAGCA GCGGCCAAGTATGCCGCCACAACAGCCGCCCCGGACTTTACAATTGAGTCTGACAAGCCCTATGCAGAACTCTGG ATGGGCACACACCCCTCTCTTCCATCGAAAGATGTGGAGACACAGCGTACCCTCCTCGACATGGTTCAGGATAAC CAGGCCTTGCTGTCGACCGATGTGAGTGAACGATTTGGAGGCAAACTCCCGTTCCTGTTCAAGGTGCTTTCTATC CGTAAAGCGCTCAGCATCCAAGCCCATCCAAACAAGAAGCTCGCGGAGCAGCTCCATGCCCGGGACCCAAAGAAC TATCCCGATGACAATCACAAGCCCGAGATGACCATTGCCATCACTCCGTTCGAGGGTATGTGTGGCTTCCGCCCG CTCGCCGAGATCACACATTTCCTCCAAGCTGTAGAGCCTCTGCGCACCCTTGTTGGCAATCAGGCGGCGAGTGAG TTCGAGCAAATTGTCAAGGGCAACGAAAACTCAGAGGAACCTGCTGTCATCCGAAAGAACAAAGAAGCGCTACGC TCCCTCTTCACCACGCTGATGGAGTCTTCATCCGAAAAGATAGAGACAGCCTGCAAGAACCTTATCTCGGCTGCG GACAATAGCCCCGACAGTTTTGCAACCCTGGCAGGTGATGTGGAGACGAACCCTACCAACCCCGCTGAGCTGGCT GCGCTTGCCAAGCGCCTGAACGGACAGTTCCCGAACGACATCGGCCTGTTCGTATTCTTCTTCCTCAACTTTGTC AAGCTGCAGCCTGGCGAGGGTATGTTCCTGAAGGCAGATGATATCCACGCGTATATTTCCGGTGATGTCATCGAG TGCATGGCCTCCTCTGACAACGTGGTGCGAGCGGGCTTCACCCCGAAGTTCAAGGACGTTGACACCCTCACCCAG ATGCTGACCTACTCCTACGCACCAATCGAGGAGCAGAAGATCCAGGCCACAGACTACCCGTATGCCATTTTGAAC GCCACTGCTTACTCTAGCGCCTCGTCCGTGATGCTCTACGACCCTCCTATCGACGAGTTCAGTGTTATCAAGGCC GACTTGAACCGAACTGGCGCCAAGGCCACTTTTGACCCGATCGACGGCCCCAGTATCTTCATATGTACACGTGGC AAGGGCAAGATTACTGTTAGCAACAAGACCGAGGAGGTCAAGGAGGGCTATGTTTTCTTCGTCGGCGCTACCGCT GAGTGTGTGATTGAGAACACTGGCAGCGGTGAGGGCGATGATGATGTCTTTACGACCTACAAAGCATTCTGTGAA TTGACCCCGACCGGTGAGGAAAACTAG |
Transcript | >Pro_DTO377G3_2|g2048.t1 ATGCAGATACCACTACTTCGGCTGCAATGCGGCGTCAATAGCTACGACTGGGGCAAGGTTGGCCAAGAGTCAGCA GCGGCCAAGTATGCCGCCACAACAGCCGCCCCGGACTTTACAATTGAGTCTGACAAGCCCTATGCAGAACTCTGG ATGGGCACACACCCCTCTCTTCCATCGAAAGATGTGGAGACACAGCGTACCCTCCTCGACATGGTTCAGGATAAC CAGGCCTTGCTGTCGACCGATGTGAGTGAACGATTTGGAGGCAAACTCCCGTTCCTGTTCAAGGTGCTTTCTATC CGTAAAGCGCTCAGCATCCAAGCCCATCCAAACAAGAAGCTCGCGGAGCAGCTCCATGCCCGGGACCCAAAGAAC TATCCCGATGACAATCACAAGCCCGAGATGACCATTGCCATCACTCCGTTCGAGGGTATGTGTGGCTTCCGCCCG CTCGCCGAGATCACACATTTCCTCCAAGCTGTAGAGCCTCTGCGCACCCTTGTTGGCAATCAGGCGGCGAGTGAG TTCGAGCAAATTGTCAAGGGCAACGAAAACTCAGAGGAACCTGCTGTCATCCGAAAGAACAAAGAAGCGCTACGC TCCCTCTTCACCACGCTGATGGAGTCTTCATCCGAAAAGATAGAGACAGCCTGCAAGAACCTTATCTCGGCTGCG GACAATAGCCCCGACAGTTTTGCAACCCTGGCAGGTGATGTGGAGACGAACCCTACCAACCCCGCTGAGCTGGCT GCGCTTGCCAAGCGCCTGAACGGACAGTTCCCGAACGACATCGGCCTGTTCGTATTCTTCTTCCTCAACTTTGTC AAGCTGCAGCCTGGCGAGGGTATGTTCCTGAAGGCAGATGATATCCACGCGTATATTTCCGGTGATGTCATCGAG TGCATGGCCTCCTCTGACAACGTGGTGCGAGCGGGCTTCACCCCGAAGTTCAAGGACGTTGACACCCTCACCCAG ATGCTGACCTACTCCTACGCACCAATCGAGGAGCAGAAGATCCAGGCCACAGACTACCCGTATGCCATTTTGAAC GCCACTGCTTACTCTAGCGCCTCGTCCGTGATGCTCTACGACCCTCCTATCGACGAGTTCAGTGTTATCAAGGCC GACTTGAACCGAACTGGCGCCAAGGCCACTTTTGACCCGATCGACGGCCCCAGTATCTTCATATGTACACGTGGC AAGGGCAAGATTACTGTTAGCAACAAGACCGAGGAGGTCAAGGAGGGCTATGTTTTCTTCGTCGGCGCTACCGCT GAGTGTGTGATTGAGAACACTGGCAGCGGTGAGGGCGATGATGATGTCTTTACGACCTACAAAGCATTCTGTGAA TTGACCCCGACCGGTGAGGAAAACTAG |
Gene | >Pro_DTO377G3_2|g2048.t1 ATGCAGATACCACTACTTCGGCTGCAATGCGGTAAGTTTGGGGATGCTCAATAAGAGAGACATAGCTGACATACT TTCCTTTAGGCGTCAATAGCTACGACTGGGGTAAGCTAGTCCCGCTTGCGATTGTGTTCCCCGCACTAACATCCC GTCATAGGCAAGGTTGGCCAAGAGTCAGCAGCGGCCAAGTATGCCGCCACAACAGCCGCCCCGGACTTTACAATT GAGTCTGACAAGCCCTATGCAGAAGTAAGTGAGAGATCAATAGTAATATTCGACTTGATGGGCTCACAATTTATA GCTCTGGATGGGCACACACCCCTCTCTTCCATCGAAAGATGTGGAGACACAGCGTACCCTCCTCGACATGGTTCA GGATAACCAGGCCTTGCTGTCGACCGATGTGAGTGAACGATTTGGAGGCAAACTCCCGTTCCTGTTCAAGGTGCT TTCTATCCGTAAAGCGCTCAGCATCCAAGCCCATCCAAACAAGAAGCTCGCGGAGCAGCTCCATGCCCGGGACCC AAAGAACTATCCCGGTGAGTGGTACTTCGGATCACACTCGATACACGAGCACCCGGAAACATGGCTAACCGCTTG CAAGATGACAATCACAAGCCCGAGATGACCATTGCCATCACTCCGTTCGAGGGTATGTGTGGCTTCCGCCCGCTC GCCGAGATCACACATTTCCTCCAAGCTGTAGAGCCTCTGCGCACCCTTGTTGGCAATCAGGCGGCGAGTGAGTTC GAGCAAATTGTCAAGGGCAACGAAAACTCAGAGGAACCTGCTGTCATCCGAAAGAACAAAGAAGCGCTACGCTCC CTCTTCACCACGCTGATGGAGTCTTCATCCGAAAAGATAGAGACAGCCTGCAAGAACCTTATCTCGGCTGCGGAC AATAGCCCCGACAGTTTTGCAACCCTGGCAGGTGATGTGGAGACGAACCCTACCAACCCCGCTGAGCTGGCTGCG CTTGCCAAGCGCCTGAACGGACAGTTCCCGAACGACATCGGCCTGTTCGTATTCTTCTTCCTCAACTTTGTCAAG CTGCAGCCTGGCGAGGGTATGTTCCTGAAGGCAGATGATATCCACGCGTATATTTCCGGTGATGTCATCGAGTGC ATGGCCTCCTCTGACAACGTGGTGCGAGCGGGCTTCACCCCGAAGTTCAAGGACGTTGACACCCTCACCCAGATG CTGACCTACTCCTACGCACCAATCGAGGAGCAGAAGATCCAGGCCACAGACTACCCGTATGCCATTTTGAACGCC ACTGCTTACTCTAGCGCCTCGTCCGTGATGCTCTACGACCCTCCTATCGACGAGTTCAGTGTTATCAAGGCCGAC TTGAACCGAACTGGCGCCAAGGCCACTTTTGACCCGATCGACGGCCCCAGTATCTTCATATGTACACGTGGCAAG GGCAAGATTACTGTTAGCAACAAGACCGAGGAGGTCAAGGAGGGCTATGTTTTCTTCGTCGGCGCTACCGCTGAG TGTGTGATTGAGAACACTGGCAGCGGTGAGGGCGATGATGATGTCTTTACGACCTACAAAGCATTCTGTGAATTG ACCCCGACCGGTGAGGAAAACTAG |