Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2044.t1
Gene name
Locationscaffold_02:1524452..1525604
Strand+
Gene length (bp)1152
Transcript length (bp)888
Coding sequence length (bp)888
Protein length (aa) 296

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF04733 Coatomer_E Coatomer epsilon subunit 4.1E-58 9 289
PF13432 TPR_16 Tetratricopeptide repeat 1.7E-03 75 132
PF13174 TPR_6 Tetratricopeptide repeat 2.5E-02 76 101

GO

GO Term Description Terminal node
GO:0005515 protein binding Yes
GO:0005488 binding No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 61 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2044.t1
MDPFSAEGELLNIHSAFHSGQYQNVIDFETAALSPENQLPAQVLRLRAQIALGQFEESLAEPSIEEDSPDLSAVR
ALALQSSGKTDAALQLAQELAENYPENNTVQVLAATVLQAQGHSEEALALLSKHQGNLEAVSLIVQIHLVQNRTD
LALKEVQAAKRWGQDSLLVNVAESWVGLRVGGDKYQSAFYVFEELASAPGTSAPLSIVGQAIAEIHLGRLPEAEA
ALTAALETYPTDVELIANSIVLNVLAGKQTEDLESRLQQVQPAHPLLTDIQEKSEFFDTAAAKFSAKVSS*
Coding >Pro_DTO377G3_2|g2044.t1
ATGGATCCCTTTTCTGCAGAGGGCGAGCTCCTCAACATCCACAGCGCCTTCCACTCAGGCCAATACCAGAATGTG
ATTGACTTCGAGACCGCCGCGCTCTCCCCCGAGAACCAGCTCCCCGCTCAAGTCCTCCGACTCCGCGCCCAGATT
GCCCTTGGCCAATTCGAAGAAAGCCTCGCCGAGCCCTCCATCGAAGAGGACAGCCCTGACCTCTCCGCCGTCAGG
GCCCTGGCACTGCAGTCCTCCGGCAAAACAGACGCTGCCCTGCAGCTCGCACAAGAGCTCGCAGAGAACTACCCC
GAAAACAACACGGTGCAGGTTCTTGCTGCTACTGTGCTCCAGGCCCAGGGACACAGCGAGGAGGCGCTGGCGCTG
CTGTCCAAGCACCAGGGTAACCTCGAGGCCGTCTCCCTCATTGTCCAGATCCATCTCGTACAAAACCGGACCGAT
CTCGCGCTCAAGGAGGTTCAGGCTGCCAAGCGCTGGGGTCAGGATTCGCTGCTGGTCAACGTTGCCGAGTCGTGG
GTTGGCTTGAGAGTTGGCGGCGACAAGTACCAGTCTGCTTTCTACGTCTTCGAGGAGCTCGCATCCGCACCCGGT
ACCTCCGCACCGCTATCTATCGTTGGTCAGGCCATCGCTGAGATCCACCTGGGTCGTCTTCCTGAGGCTGAGGCT
GCCCTCACCGCTGCCCTTGAGACATACCCTACCGACGTGGAGTTGATTGCCAATAGCATTGTTTTGAATGTGTTG
GCTGGCAAGCAGACCGAGGACCTGGAGTCCCGGCTACAGCAGGTCCAGCCCGCGCACCCCCTTCTCACCGATATC
CAGGAGAAGAGCGAGTTTTTCGATACTGCGGCGGCAAAGTTCTCTGCTAAGGTCTCATCGTAG
Transcript >Pro_DTO377G3_2|g2044.t1
ATGGATCCCTTTTCTGCAGAGGGCGAGCTCCTCAACATCCACAGCGCCTTCCACTCAGGCCAATACCAGAATGTG
ATTGACTTCGAGACCGCCGCGCTCTCCCCCGAGAACCAGCTCCCCGCTCAAGTCCTCCGACTCCGCGCCCAGATT
GCCCTTGGCCAATTCGAAGAAAGCCTCGCCGAGCCCTCCATCGAAGAGGACAGCCCTGACCTCTCCGCCGTCAGG
GCCCTGGCACTGCAGTCCTCCGGCAAAACAGACGCTGCCCTGCAGCTCGCACAAGAGCTCGCAGAGAACTACCCC
GAAAACAACACGGTGCAGGTTCTTGCTGCTACTGTGCTCCAGGCCCAGGGACACAGCGAGGAGGCGCTGGCGCTG
CTGTCCAAGCACCAGGGTAACCTCGAGGCCGTCTCCCTCATTGTCCAGATCCATCTCGTACAAAACCGGACCGAT
CTCGCGCTCAAGGAGGTTCAGGCTGCCAAGCGCTGGGGTCAGGATTCGCTGCTGGTCAACGTTGCCGAGTCGTGG
GTTGGCTTGAGAGTTGGCGGCGACAAGTACCAGTCTGCTTTCTACGTCTTCGAGGAGCTCGCATCCGCACCCGGT
ACCTCCGCACCGCTATCTATCGTTGGTCAGGCCATCGCTGAGATCCACCTGGGTCGTCTTCCTGAGGCTGAGGCT
GCCCTCACCGCTGCCCTTGAGACATACCCTACCGACGTGGAGTTGATTGCCAATAGCATTGTTTTGAATGTGTTG
GCTGGCAAGCAGACCGAGGACCTGGAGTCCCGGCTACAGCAGGTCCAGCCCGCGCACCCCCTTCTCACCGATATC
CAGGAGAAGAGCGAGTTTTTCGATACTGCGGCGGCAAAGTTCTCTGCTAAGGTCTCATCGTAG
Gene >Pro_DTO377G3_2|g2044.t1
ATGGATCCCTTTTCTGCAGAGGGCGGTACGCATTCCAGTTCTTTCTACAGCTCCGATCAACGCTAACCCAGCTTC
CCCGCAGAGCTCCTCAACATCCACAGCGCCTTCCACTCAGGCCAATACCAGAATGTGATTGACTTCGAGACCGCC
GCGCTCTCCCCCGAGAACCAGCTCCCCGCTCAAGTCCTCCGACTCCGCGCCCAGATTGCCCTTGGCCAATTCGAA
GAAAGCCTCGCCGAGCCCTCCATCGAAGAGGACAGCCCTGACCTCTCCGCCGTCAGGGCCCTGGCACTGCAGTCC
TCCGGCAAAACAGACGCTGCCCTGCAGCTCGCACAAGAGCTCGCAGAGAACTACCCCGAAAACAACACGGTGCAG
GTTCTTGCTGCTACTGTGCTCCAGGCCCAGGGACACAGCGAGGAGGCGCTGGCGCTGCTGTCCAAGCACCAGGGT
AACCTCGAGGCGTGAGTTACCCCGTCGCAAGTAGGCCGCAAATATAACGGAGCATGTTGGTCTGACATTCTATCT
CTCCTAGCGTCTCCCTCATTGTCCAGATCCATCTCGTACAAAACCGGACCGATCTCGCGCTCAAGGAGGTTCAGG
CTGCCAAGCGCTGGGGTCAGGATTCGCTGCTGGTCAACGTTGCCGAGTCGTGGGTTGGCTTGAGAGTTGTATGTT
GATGATAAACCCATAATCTTCTGGTTGATGGTTGATGGTCTATGAGTGCTGATTTGTGTTTCTGTACAGGGCGGC
GACAAGTACCAGTCTGCTTTCTACGTCTTCGAGGAGCTCGCATCCGCACCCGGTACCTCCGCACCGCTATCTATC
GTTGGTCAGGCCATCGCTGAGATCCACCTGGGTCGTCTTCCTGAGGCTGAGGCTGCCCTCACCGCTGCCCTTGAG
ACATACCCTACCGACGTGGAGTTGATTGCCAATAGCATTGTTTTGAATGTGTTGGCTGGCAAGCAGACCGAGGAC
CTGGAGTCGTATGTCATCCTATCGGAGAAGAAGATAGTGAACTCGATGCTAACTTTTATCTTGTCTAGCCGGCTA
CAGCAGGTCCAGCCCGCGCACCCCCTTCTCACCGATATCCAGGAGAAGAGCGAGTTTTTCGATACTGCGGCGGCA
AAGTTCTCTGCTAAGGTCTCATCGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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