Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g2016.t1
Gene name
Location	scaffold_02:1427473..1429281
Strand	+
Gene length (bp)	1808
Transcript length (bp)	1698
Coding sequence length (bp)	1698
Protein length (aa)	566

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF00649	Copper-fist	Copper fist DNA binding domain	1.1E-17	5	40

GO

GO Term	Description	Terminal node
GO:0005507	copper ion binding	Yes
GO:0003700	DNA-binding transcription factor activity	Yes
GO:0006355	regulation of transcription, DNA-templated	Yes
GO:0003677	DNA binding	Yes
GO:0060255	regulation of macromolecule metabolic process	No
GO:0005488	binding	No
GO:0050789	regulation of biological process	No
GO:0140110	transcription regulator activity	No
GO:0010468	regulation of gene expression	No
GO:0010556	regulation of macromolecule biosynthetic process	No
GO:0003676	nucleic acid binding	No
GO:0046914	transition metal ion binding	No
GO:0008150	biological_process	No
GO:0051252	regulation of RNA metabolic process	No
GO:0043167	ion binding	No
GO:0046872	metal ion binding	No
GO:0031323	regulation of cellular metabolic process	No
GO:2001141	regulation of RNA biosynthetic process	No
GO:1903506	regulation of nucleic acid-templated transcription	No
GO:0065007	biological regulation	No
GO:0003674	molecular_function	No
GO:0051171	regulation of nitrogen compound metabolic process	No
GO:0019222	regulation of metabolic process	No
GO:0097159	organic cyclic compound binding	No
GO:0019219	regulation of nucleobase-containing compound metabolic process	No
GO:0031326	regulation of cellular biosynthetic process	No
GO:0080090	regulation of primary metabolic process	No
GO:0043169	cation binding	No
GO:1901363	heterocyclic compound binding	No
GO:0009889	regulation of biosynthetic process	No
GO:0050794	regulation of cellular process	No

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 13	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Click here for more information

Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g2016.t1 MPLDEEGAKWSCEPCIRGHRSSKCQHFDRLMMKVPKAGRPLAKCPHPKGTCSCQKSYAVMVRIPKGSSCLCRPLY KVPMDTNESTQSPPPSMVSTSSPAPGKVQKSGRRQSTMQAAPENIARALQNMPDKVKLEDGTSNLTSDFSSQVGL DGAHISSTTQNRSTPTPTETSRQDSQSPQVSSCCSQKQKPKAPTPTPAPTAAAAPAQNGGSCCGGSRPPTTNQAV YPEADQSQFQPPIAWDDQSYMQFPMPQMSPWQNSSIPTHEDYMHSAMHQVHPQHPSLHNGYMGMVLPHSQPQIPQ IGMSLGVTAPPSMAYSNEMNGLGITQASMSPYMLNNLEPSYNAPPGGDSCHDCSCGEDCQCLGCAAHPFNTTTRK HVQEMGAMITSNGDDKNPEVINPYQTSPYQGGTPSTSFPYFIQSTPSMDHGFQPIPFDSYSDPNSTLASGYSSPL SANHHLNQQLMHPSEYYTLEYPVGLPSACSDMTGSCQCGSDCSCVGCLTHSGHNGLSLDIPIPEHPIPDTEDKQT QHSRHVSRTSSATSRSSRIPILDNVSVPCLSPRTLETSRI*
Coding	>Pro_DTO377G3_2\|g2016.t1 ATGCCTCTCGACGAAGAAGGTGCCAAGTGGTCCTGTGAACCATGCATTCGAGGTCACCGATCGTCAAAATGCCAG CACTTCGATAGACTCATGATGAAGGTCCCTAAAGCTGGCCGACCTCTTGCAAAATGCCCCCACCCGAAGGGAACC TGCAGCTGCCAGAAGTCATATGCCGTGATGGTCCGCATTCCGAAAGGCTCATCATGTCTATGTCGTCCGCTATAT AAAGTTCCTATGGATACCAACGAGTCAACCCAGTCTCCCCCACCATCTATGGTTTCCACTTCGTCACCTGCGCCG GGCAAGGTCCAGAAGTCTGGAAGAAGACAAAGTACTATGCAAGCAGCACCTGAAAACATAGCTCGGGCGTTACAA AATATGCCAGACAAGGTTAAGCTCGAGGATGGAACATCGAACTTGACTTCAGACTTCTCTTCACAGGTCGGGTTA GATGGTGCACACATATCTTCTACTACACAAAACCGAAGTACGCCAACGCCCACAGAAACTTCCAGGCAAGACTCG CAGTCTCCCCAAGTATCAAGCTGCTGCTCTCAAAAACAAAAGCCAAAGGCACCAACCCCGACCCCAGCTCCTACT GCGGCTGCTGCTCCTGCTCAGAATGGTGGATCTTGCTGTGGAGGGTCTCGCCCTCCTACGACAAATCAAGCTGTC TACCCAGAGGCCGACCAATCGCAATTTCAGCCGCCTATTGCTTGGGACGATCAGAGTTATATGCAATTCCCAATG CCTCAAATGTCGCCCTGGCAGAATTCCTCGATACCCACGCACGAAGACTACATGCATTCCGCCATGCATCAAGTA CATCCCCAACACCCAAGCCTCCATAATGGGTACATGGGAATGGTGCTGCCACACTCTCAGCCCCAAATTCCCCAG ATAGGGATGTCACTCGGTGTGACTGCACCGCCGTCCATGGCGTACTCCAACGAGATGAACGGTCTTGGAATTACG CAAGCCTCTATGAGTCCATACATGCTCAACAACCTCGAGCCTTCCTACAACGCCCCACCAGGCGGCGACTCTTGT CATGACTGTAGCTGTGGAGAAGATTGTCAGTGTCTTGGCTGCGCTGCTCATCCATTCAATACCACAACACGAAAA CATGTCCAAGAGATGGGTGCCATGATCACCTCCAACGGAGATGACAAGAACCCAGAAGTCATCAACCCTTACCAA ACCTCACCTTACCAGGGAGGCACCCCTTCGACCTCGTTCCCTTACTTCATTCAAAGCACCCCTTCAATGGACCAT GGCTTCCAGCCGATTCCATTTGATAGCTACTCAGACCCAAACTCTACCTTAGCCAGCGGTTACTCCTCCCCTCTA TCCGCAAACCACCATCTAAACCAGCAGTTAATGCATCCTTCGGAGTATTACACCCTGGAATACCCAGTCGGCCTA CCAAGCGCCTGTTCTGACATGACGGGGAGCTGCCAATGCGGTAGCGACTGTAGCTGTGTCGGCTGTCTCACACAC AGCGGCCACAACGGTCTTTCCCTGGATATCCCTATCCCCGAGCACCCCATTCCCGACACAGAGGACAAGCAAACT CAACACTCGCGCCATGTTTCCCGCACAAGTTCCGCTACGTCTCGATCTTCGCGGATCCCGATATTAGACAATGTG TCTGTGCCCTGCCTTAGTCCGCGCACTTTGGAGACTTCTAGGATCTAG
Transcript	>Pro_DTO377G3_2\|g2016.t1 ATGCCTCTCGACGAAGAAGGTGCCAAGTGGTCCTGTGAACCATGCATTCGAGGTCACCGATCGTCAAAATGCCAG CACTTCGATAGACTCATGATGAAGGTCCCTAAAGCTGGCCGACCTCTTGCAAAATGCCCCCACCCGAAGGGAACC TGCAGCTGCCAGAAGTCATATGCCGTGATGGTCCGCATTCCGAAAGGCTCATCATGTCTATGTCGTCCGCTATAT AAAGTTCCTATGGATACCAACGAGTCAACCCAGTCTCCCCCACCATCTATGGTTTCCACTTCGTCACCTGCGCCG GGCAAGGTCCAGAAGTCTGGAAGAAGACAAAGTACTATGCAAGCAGCACCTGAAAACATAGCTCGGGCGTTACAA AATATGCCAGACAAGGTTAAGCTCGAGGATGGAACATCGAACTTGACTTCAGACTTCTCTTCACAGGTCGGGTTA GATGGTGCACACATATCTTCTACTACACAAAACCGAAGTACGCCAACGCCCACAGAAACTTCCAGGCAAGACTCG CAGTCTCCCCAAGTATCAAGCTGCTGCTCTCAAAAACAAAAGCCAAAGGCACCAACCCCGACCCCAGCTCCTACT GCGGCTGCTGCTCCTGCTCAGAATGGTGGATCTTGCTGTGGAGGGTCTCGCCCTCCTACGACAAATCAAGCTGTC TACCCAGAGGCCGACCAATCGCAATTTCAGCCGCCTATTGCTTGGGACGATCAGAGTTATATGCAATTCCCAATG CCTCAAATGTCGCCCTGGCAGAATTCCTCGATACCCACGCACGAAGACTACATGCATTCCGCCATGCATCAAGTA CATCCCCAACACCCAAGCCTCCATAATGGGTACATGGGAATGGTGCTGCCACACTCTCAGCCCCAAATTCCCCAG ATAGGGATGTCACTCGGTGTGACTGCACCGCCGTCCATGGCGTACTCCAACGAGATGAACGGTCTTGGAATTACG CAAGCCTCTATGAGTCCATACATGCTCAACAACCTCGAGCCTTCCTACAACGCCCCACCAGGCGGCGACTCTTGT CATGACTGTAGCTGTGGAGAAGATTGTCAGTGTCTTGGCTGCGCTGCTCATCCATTCAATACCACAACACGAAAA CATGTCCAAGAGATGGGTGCCATGATCACCTCCAACGGAGATGACAAGAACCCAGAAGTCATCAACCCTTACCAA ACCTCACCTTACCAGGGAGGCACCCCTTCGACCTCGTTCCCTTACTTCATTCAAAGCACCCCTTCAATGGACCAT GGCTTCCAGCCGATTCCATTTGATAGCTACTCAGACCCAAACTCTACCTTAGCCAGCGGTTACTCCTCCCCTCTA TCCGCAAACCACCATCTAAACCAGCAGTTAATGCATCCTTCGGAGTATTACACCCTGGAATACCCAGTCGGCCTA CCAAGCGCCTGTTCTGACATGACGGGGAGCTGCCAATGCGGTAGCGACTGTAGCTGTGTCGGCTGTCTCACACAC AGCGGCCACAACGGTCTTTCCCTGGATATCCCTATCCCCGAGCACCCCATTCCCGACACAGAGGACAAGCAAACT CAACACTCGCGCCATGTTTCCCGCACAAGTTCCGCTACGTCTCGATCTTCGCGGATCCCGATATTAGACAATGTG TCTGTGCCCTGCCTTAGTCCGCGCACTTTGGAGACTTCTAGGATCTAG
Gene	>Pro_DTO377G3_2\|g2016.t1 ATGCCTCTCGACGAAGAAGGTGCCAAGTGGTCCTGGTAGGAATATCTCGTACATTGTCAATGAAACCGGGCTAAA CCGTTACTCCAGTGAACCATGCATTCGAGGTCACCGATCGTCAAAATGCCAGCACTTCGATAGACTCATGATGAA GGTCCCTAAAGCTGGCCGACCTCTTGCAAAATGCCCCCACCCGAAGGGAACCTGCAGCTGCCAGAAGTCATATGC CGTGATGGTCCGCATTCCGAAAGGTAAGGATATATTTGTCAACCCACTACACATGTGTTTGCGTCGTACTGACTT GCCTAGGCTCATCATGTCTATGTCGTCCGCTATATAAAGTTCCTATGGATACCAACGAGTCAACCCAGTCTCCCC CACCATCTATGGTTTCCACTTCGTCACCTGCGCCGGGCAAGGTCCAGAAGTCTGGAAGAAGACAAAGTACTATGC AAGCAGCACCTGAAAACATAGCTCGGGCGTTACAAAATATGCCAGACAAGGTTAAGCTCGAGGATGGAACATCGA ACTTGACTTCAGACTTCTCTTCACAGGTCGGGTTAGATGGTGCACACATATCTTCTACTACACAAAACCGAAGTA CGCCAACGCCCACAGAAACTTCCAGGCAAGACTCGCAGTCTCCCCAAGTATCAAGCTGCTGCTCTCAAAAACAAA AGCCAAAGGCACCAACCCCGACCCCAGCTCCTACTGCGGCTGCTGCTCCTGCTCAGAATGGTGGATCTTGCTGTG GAGGGTCTCGCCCTCCTACGACAAATCAAGCTGTCTACCCAGAGGCCGACCAATCGCAATTTCAGCCGCCTATTG CTTGGGACGATCAGAGTTATATGCAATTCCCAATGCCTCAAATGTCGCCCTGGCAGAATTCCTCGATACCCACGC ACGAAGACTACATGCATTCCGCCATGCATCAAGTACATCCCCAACACCCAAGCCTCCATAATGGGTACATGGGAA TGGTGCTGCCACACTCTCAGCCCCAAATTCCCCAGATAGGGATGTCACTCGGTGTGACTGCACCGCCGTCCATGG CGTACTCCAACGAGATGAACGGTCTTGGAATTACGCAAGCCTCTATGAGTCCATACATGCTCAACAACCTCGAGC CTTCCTACAACGCCCCACCAGGCGGCGACTCTTGTCATGACTGTAGCTGTGGAGAAGATTGTCAGTGTCTTGGCT GCGCTGCTCATCCATTCAATACCACAACACGAAAACATGTCCAAGAGATGGGTGCCATGATCACCTCCAACGGAG ATGACAAGAACCCAGAAGTCATCAACCCTTACCAAACCTCACCTTACCAGGGAGGCACCCCTTCGACCTCGTTCC CTTACTTCATTCAAAGCACCCCTTCAATGGACCATGGCTTCCAGCCGATTCCATTTGATAGCTACTCAGACCCAA ACTCTACCTTAGCCAGCGGTTACTCCTCCCCTCTATCCGCAAACCACCATCTAAACCAGCAGTTAATGCATCCTT CGGAGTATTACACCCTGGAATACCCAGTCGGCCTACCAAGCGCCTGTTCTGACATGACGGGGAGCTGCCAATGCG GTAGCGACTGTAGCTGTGTCGGCTGTCTCACACACAGCGGCCACAACGGTCTTTCCCTGGATATCCCTATCCCCG AGCACCCCATTCCCGACACAGAGGACAAGCAAACTCAACACTCGCGCCATGTTTCCCGCACAAGTTCCGCTACGT CTCGATCTTCGCGGATCCCGATATTAGACAATGTGTCTGTGCCCTGCCTTAGTCCGCGCACTTTGGAGACTTCTA GGATCTAG

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences