Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g2000.t1
Gene name
Locationscaffold_02:1386550..1386938
Strand+
Gene length (bp)388
Transcript length (bp)324
Coding sequence length (bp)324
Protein length (aa) 108

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF14342 DUF4396 Domain of unknown function (DUF4396) 3.2E-30 2 104

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)		 D score
(significance: > 0.45)
No 1 - 19 0.5

Transmembrane Domains

Domain # Start End Length
1 4 26 22
2 33 55 22
3 75 97 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g2000.t1
MGMSSAMALSMACGITTSVILKTILLRRGADQLSWPMAARTAMGMSMVSMLAMELAENAVDYHLTGGVVALGDPN
FWLAAMLSIGAGYLAPLPYNYLRLRKYGKSCH*
Coding >Pro_DTO377G3_2|g2000.t1
ATGGGTATGAGCAGCGCAATGGCCTTGTCGATGGCATGCGGTATCACGACTTCAGTTATCCTCAAGACAATTCTG
CTCCGCCGGGGGGCTGACCAGCTTTCCTGGCCGATGGCCGCTCGTACTGCTATGGGCATGAGTATGGTTTCAATG
TTGGCCATGGAACTAGCTGAGAATGCAGTTGACTATCATCTGACCGGTGGGGTAGTTGCTCTTGGAGATCCAAAT
TTCTGGCTGGCGGCAATGTTATCGATCGGTGCTGGGTATTTGGCGCCGTTGCCGTATAACTATCTGCGTCTTCGA
AAATATGGGAAATCTTGTCACTAA
Transcript >Pro_DTO377G3_2|g2000.t1
ATGGGTATGAGCAGCGCAATGGCCTTGTCGATGGCATGCGGTATCACGACTTCAGTTATCCTCAAGACAATTCTG
CTCCGCCGGGGGGCTGACCAGCTTTCCTGGCCGATGGCCGCTCGTACTGCTATGGGCATGAGTATGGTTTCAATG
TTGGCCATGGAACTAGCTGAGAATGCAGTTGACTATCATCTGACCGGTGGGGTAGTTGCTCTTGGAGATCCAAAT
TTCTGGCTGGCGGCAATGTTATCGATCGGTGCTGGGTATTTGGCGCCGTTGCCGTATAACTATCTGCGTCTTCGA
AAATATGGGAAATCTTGTCACTAA
Gene >Pro_DTO377G3_2|g2000.t1
ATGGGTATGAGCAGCGCAATGGCCTTGTCGAGTGGGTTGCCTCCTTGAACGGATCTAATTGTATTGGGTCTTGCG
TGCTAAGAATAATCATCTAGTGGCATGCGGTATCACGACTTCAGTTATCCTCAAGACAATTCTGCTCCGCCGGGG
GGCTGACCAGCTTTCCTGGCCGATGGCCGCTCGTACTGCTATGGGCATGAGTATGGTTTCAATGTTGGCCATGGA
ACTAGCTGAGAATGCAGTTGACTATCATCTGACCGGTGGGGTAGTTGCTCTTGGAGATCCAAATTTCTGGCTGGC
GGCAATGTTATCGATCGGTGCTGGGTATTTGGCGCCGTTGCCGTATAACTATCTGCGTCTTCGAAAATATGGGAA
ATCTTGTCACTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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