Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g1983.t1
Gene name
Locationscaffold_02:1344024..1345831
Strand+
Gene length (bp)1807
Transcript length (bp)1245
Coding sequence length (bp)1245
Protein length (aa) 415

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF08438 MMR_HSR1_C GTPase of unknown function C-terminal 3.5E-36 226 345
PF01926 MMR_HSR1 50S ribosome-binding GTPase 4.1E-20 7 128
PF02421 FeoB_N Ferrous iron transport protein B 1.5E-07 7 43

GO

GO Term Description Terminal node
GO:0005525 GTP binding Yes
GO:0097367 carbohydrate derivative binding No
GO:0032549 ribonucleoside binding No
GO:1901363 heterocyclic compound binding No
GO:0032555 purine ribonucleotide binding No
GO:0097159 organic cyclic compound binding No
GO:0032553 ribonucleotide binding No
GO:0001883 purine nucleoside binding No
GO:0043168 anion binding No
GO:0001882 nucleoside binding No
GO:1901265 nucleoside phosphate binding No
GO:0017076 purine nucleotide binding No
GO:0036094 small molecule binding No
GO:0032561 guanyl ribonucleotide binding No
GO:0032550 purine ribonucleoside binding No
GO:0000166 nucleotide binding No
GO:0003674 molecular_function No
GO:0043167 ion binding No
GO:0035639 purine ribonucleoside triphosphate binding No
GO:0019001 guanyl nucleotide binding No
GO:0005488 binding No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 11 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g1983.t1
MGRDPLIGLVGKPSSGKSTTLNSLTDATSKVGNFPFTTIDPQRAIGYLQIDCPCQRYNVSDRCQPNYGACHEGRR
SVPIELLDVAGLVPGAHQGRGLGNKFLDDLRHADALIHVVDVSGTTDAEGKATRGYDPSVDIEWLRSEIVRWVLG
NLMERWGSIKRRHQALKANPVDTLQKQFAGYGSTHATVARFMDKLALKEPLEDWSNETVELVVNAFIDEKFPTVF
ALNKIDHPDADKNISKIAKMQSPESIVLCSAISEVFLRKLAKQDYIKYVEGSEFIDTREDLIEMGDPDGGGLKEM
DEKLKTRVENMKDMVLYRFGSTGVVQCLSRAAELLGLVPVFPVRNVATFNSGTGTAVFRDCVLVNKNSTVGDVAR
KVMGDVPINYVEGVGGTRVSEDDIVAVGKHDILSFKVGR*
Coding >Pro_DTO377G3_2|g1983.t1
ATGGGTCGAGATCCGCTGATCGGACTGGTGGGAAAGCCGTCTAGTGGAAAATCTACAACATTGAACAGCTTGACC
GATGCGACTTCGAAAGTCGGAAACTTCCCCTTCACAACCATTGACCCCCAGCGAGCCATCGGATACCTTCAAATC
GACTGCCCATGCCAGCGATACAATGTTTCAGATCGCTGCCAGCCCAATTACGGAGCCTGCCACGAAGGGCGACGT
TCCGTGCCGATTGAGTTGCTGGATGTTGCAGGTCTTGTCCCAGGCGCGCATCAAGGACGCGGACTAGGTAACAAG
TTCTTGGACGATCTGCGTCATGCCGATGCTCTAATTCACGTCGTGGATGTGAGCGGGACCACGGATGCTGAAGGA
AAGGCTACTCGAGGTTACGATCCCTCAGTAGACATTGAGTGGTTGCGATCAGAGATAGTTCGATGGGTTCTAGGA
AACTTGATGGAGAGGTGGGGTTCAATAAAGAGGAGACATCAGGCATTGAAGGCAAACCCTGTCGACACATTACAG
AAACAGTTTGCTGGTTATGGAAGTACCCACGCCACTGTTGCGCGATTTATGGATAAACTCGCCTTAAAAGAACCA
TTGGAAGACTGGTCAAATGAGACGGTGGAGCTTGTTGTGAACGCTTTTATCGACGAGAAATTCCCCACTGTGTTC
GCGTTGAACAAGATCGACCACCCAGATGCAGACAAGAACATCAGCAAAATTGCGAAAATGCAATCTCCCGAAAGC
ATTGTGCTTTGCTCCGCTATATCCGAGGTGTTCCTCCGAAAGCTGGCAAAGCAGGATTACATCAAGTACGTTGAA
GGCAGTGAGTTCATCGACACGCGAGAAGATTTGATCGAGATGGGCGACCCAGACGGAGGAGGCCTCAAAGAGATG
GACGAGAAATTGAAAACTCGGGTTGAGAACATGAAAGATATGGTGCTGTATCGATTTGGATCTACCGGGGTCGTC
CAATGTCTTTCCCGAGCCGCAGAGCTTCTAGGACTCGTACCAGTGTTCCCCGTTCGAAACGTGGCGACATTCAAT
TCTGGCACTGGAACTGCTGTATTCCGCGACTGTGTTTTGGTCAATAAAAACAGTACCGTCGGTGATGTTGCCCGG
AAGGTGATGGGCGACGTACCTATCAACTATGTCGAGGGTGTGGGTGGAACTCGAGTCTCCGAGGATGACATTGTG
GCAGTTGGGAAACACGACATATTATCGTTCAAGGTTGGTCGGTAG
Transcript >Pro_DTO377G3_2|g1983.t1
ATGGGTCGAGATCCGCTGATCGGACTGGTGGGAAAGCCGTCTAGTGGAAAATCTACAACATTGAACAGCTTGACC
GATGCGACTTCGAAAGTCGGAAACTTCCCCTTCACAACCATTGACCCCCAGCGAGCCATCGGATACCTTCAAATC
GACTGCCCATGCCAGCGATACAATGTTTCAGATCGCTGCCAGCCCAATTACGGAGCCTGCCACGAAGGGCGACGT
TCCGTGCCGATTGAGTTGCTGGATGTTGCAGGTCTTGTCCCAGGCGCGCATCAAGGACGCGGACTAGGTAACAAG
TTCTTGGACGATCTGCGTCATGCCGATGCTCTAATTCACGTCGTGGATGTGAGCGGGACCACGGATGCTGAAGGA
AAGGCTACTCGAGGTTACGATCCCTCAGTAGACATTGAGTGGTTGCGATCAGAGATAGTTCGATGGGTTCTAGGA
AACTTGATGGAGAGGTGGGGTTCAATAAAGAGGAGACATCAGGCATTGAAGGCAAACCCTGTCGACACATTACAG
AAACAGTTTGCTGGTTATGGAAGTACCCACGCCACTGTTGCGCGATTTATGGATAAACTCGCCTTAAAAGAACCA
TTGGAAGACTGGTCAAATGAGACGGTGGAGCTTGTTGTGAACGCTTTTATCGACGAGAAATTCCCCACTGTGTTC
GCGTTGAACAAGATCGACCACCCAGATGCAGACAAGAACATCAGCAAAATTGCGAAAATGCAATCTCCCGAAAGC
ATTGTGCTTTGCTCCGCTATATCCGAGGTGTTCCTCCGAAAGCTGGCAAAGCAGGATTACATCAAGTACGTTGAA
GGCAGTGAGTTCATCGACACGCGAGAAGATTTGATCGAGATGGGCGACCCAGACGGAGGAGGCCTCAAAGAGATG
GACGAGAAATTGAAAACTCGGGTTGAGAACATGAAAGATATGGTGCTGTATCGATTTGGATCTACCGGGGTCGTC
CAATGTCTTTCCCGAGCCGCAGAGCTTCTAGGACTCGTACCAGTGTTCCCCGTTCGAAACGTGGCGACATTCAAT
TCTGGCACTGGAACTGCTGTATTCCGCGACTGTGTTTTGGTCAATAAAAACAGTACCGTCGGTGATGTTGCCCGG
AAGGTGATGGGCGACGTACCTATCAACTATGTCGAGGGTGTGGGTGGAACTCGAGTCTCCGAGGATGACATTGTG
GCAGTTGGGAAACACGACATATTATCGTTCAAGGTTGGTCGGTAG
Gene >Pro_DTO377G3_2|g1983.t1
ATGGGTCGAGATCCGCTGATCGGACTGGTGGGAAAGGTATGTTGTTCCCCTCCATTGTTCTCACACCCCACTGAC
GAGGGGCATAGCCGTCTAGTGGAAAATCTACAACATTGAACAGCTTGACCGATGCGACTTCGAAAGTCGGTAAGT
GAACCGAGATGCGATTATGACCAACTGAAACCTAATAAATTATGTTCGGAACAGGAAACTTCCCGTATGTGCTCC
CCGATTGTTCTACATGAGCATCTCCACCTTATCGCATTGATCGCGCAGACCGTGTTGACAACCAACAGCTTCACA
ACCATTGACCCCCAGCGAGCCATCGGATACCTTCAAATCGACTGCCCATGCCAGCGATACAATGTTTCAGATCGC
TGCCAGCCCAATTACGGAGCCTGCCACGAAGGGCGACGTTCCGTGCCGATTGAGTTGCTGGATGTTGCAGGTCTT
GTCCCAGGCGCGCATCAAGGACGCGGACTAGGTAACAAGTTCTTGGACGATCTGCGTCATGCCGATGCTCTAATT
CACGTCGTGGATGTGAGCGGGACCACGGATGCTGAAGGTTAGTTGGGTGTGCCGGATTGAATACAATGGCGGGAT
CGGGTGTTGATAAATATCGCAGGAAAGGCTACTCGAGGTTACGATCCCTCAGTAGACATTGAGTGGTTGCGATCA
GAGATAGTTCGATGGGTTCTAGGAAACTTGATGGAGAGGTGGTACGTTTGCAAGTGCCAACAAGGGAACGAGGGA
CAAGTGCTGATCTCTCCTTAGGGGTTCAATAAAGAGGAGACATCAGGCATTGAGTCAGTGGACTTTTCCAATGCT
ATTTGTTACACCGAACTGACTCTTAGCACAGAGGCAAACCCTGTCGACACATTACAGAAACAGTTTGCTGGTTAT
GGAAGTACCCACGCCACTGTTGCGCGATTTATGGATAAACTCGCCTTAAAAGAACCATTGGAAGACTGGTCAAAT
GAGACGGTGGAGCTTGTTGTGAACGCTTTTATCGACGAGAAATTCCCCACTGTGTTCGCGTTGAACAAGATCGAC
CACCCAGATGCAGACAAGGTACGAATATTTAGCTTATGGCCCATATATTGTTCTGACAGGAATTGCAGAACATCA
GCAAAATTGCGAAAATGCAATCTCCCGAAAGCATTGTGCTTTGCTCCGCTATATCCGAGGTGTTCCTCCGAAAGC
TGGCAAAGCAGGATTACATCAAGTACGTTGAAGGCAGTGAGTTCATCGACACGCGAGAAGATTTGATCGAGATGG
GCGACCCAGACGGAGGAGGCCTCAAAGAGATGGACGAGAAATTGAAAACGTATGTTCAGTGCTCATATAAATGTC
GTACTTTTGCTGACTGACGTCGCTCTAGTCGGGTTGAGAACATGAAAGATATGGTGCTGTATCGATTTGGATCTA
CCGGGGTCGTCCAATGTCTTTCCCGAGCCGCAGAGCTTCTAGGACTCGTACCAGTGTTCCCCGTTCGAAACGTGG
CGACATTCAATTCTGGCACTGGAACTGCTGTATTCCGCGACTGTGTTTTGGTCAATAAGTAAGTACTCTCTATTA
GAAGGCTGACGCCAGTCTAACATTTCACAGAAACAGTACCGTCGGTGATGTTGCCCGGAAGGTGATGGGCGACGT
ACCTATCAACTATGTCGAGGGTGTGGGTGGAACTCGAGTCTCCGAGGATGACATTGTGGCAGTTGGGAAACACGA
CGTGAGTGCCCCCACTAACTACATAATACGGTTGATTGACTGATTACCATGGCAGATATTATCGTTCAAGGTTGG
TCGGTAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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