Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g1979.t1
Gene name
Locationscaffold_02:1338035..1338855
Strand+
Gene length (bp)820
Transcript length (bp)660
Coding sequence length (bp)660
Protein length (aa) 220

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF01248 Ribosomal_L7Ae Ribosomal protein L7Ae/L30e/S12e/Gadd45 family 5.9E-19 90 188

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g1979.t1
MGKDKVEKKDRAEKKEKRADKDGVHKVKKEKKEKKDKTTLVDAVEKEIVSEPMEGLEQTAVVKSEVDAVVPIGAL
VPFAHPLVEDKQAKKVLKSVKKAAVNKSLKRGVKEVVKALRKSPIPAANAAIGVPSGVVVLAADISPMDVISHIP
VLCEDHGIPYVFVTSRAELGASAATKRPTSVVMVTPKAAKGKKEDDEEFTKVFEELAGLAQKEIKKLTV*
Coding >Pro_DTO377G3_2|g1979.t1
ATGGGCAAGGACAAGGTCGAGAAGAAGGACCGTGCTGAGAAGAAGGAGAAGCGCGCGGACAAGGACGGTGTGCAC
AAGGTCAAGAAGGAGAAGAAAGAGAAGAAGGATAAGACTACTCTTGTCGATGCAGTAGAGAAGGAGATTGTCTCC
GAGCCCATGGAGGGTCTCGAGCAGACCGCTGTTGTCAAGAGTGAGGTCGACGCCGTTGTCCCCATTGGCGCCCTC
GTGCCGTTCGCCCACCCATTGGTTGAGGACAAGCAGGCCAAGAAGGTTTTGAAGAGTGTCAAGAAGGCTGCCGTC
AACAAGTCTCTCAAGCGTGGTGTCAAGGAAGTCGTCAAGGCTCTCCGCAAGTCTCCCATCCCCGCTGCCAATGCT
GCCATCGGTGTCCCTAGCGGTGTCGTCGTTCTCGCTGCCGATATCTCCCCCATGGATGTTATCTCCCACATTCCC
GTTCTGTGCGAGGACCACGGAATTCCCTACGTCTTTGTCACCTCCCGTGCTGAGCTTGGTGCTTCCGCTGCCACC
AAGCGCCCTACCAGTGTGGTCATGGTTACCCCCAAGGCTGCCAAGGGCAAGAAGGAGGATGATGAGGAGTTCACC
AAGGTCTTCGAGGAGCTTGCTGGCTTGGCCCAGAAGGAGATCAAGAAGCTGACAGTCTAA
Transcript >Pro_DTO377G3_2|g1979.t1
ATGGGCAAGGACAAGGTCGAGAAGAAGGACCGTGCTGAGAAGAAGGAGAAGCGCGCGGACAAGGACGGTGTGCAC
AAGGTCAAGAAGGAGAAGAAAGAGAAGAAGGATAAGACTACTCTTGTCGATGCAGTAGAGAAGGAGATTGTCTCC
GAGCCCATGGAGGGTCTCGAGCAGACCGCTGTTGTCAAGAGTGAGGTCGACGCCGTTGTCCCCATTGGCGCCCTC
GTGCCGTTCGCCCACCCATTGGTTGAGGACAAGCAGGCCAAGAAGGTTTTGAAGAGTGTCAAGAAGGCTGCCGTC
AACAAGTCTCTCAAGCGTGGTGTCAAGGAAGTCGTCAAGGCTCTCCGCAAGTCTCCCATCCCCGCTGCCAATGCT
GCCATCGGTGTCCCTAGCGGTGTCGTCGTTCTCGCTGCCGATATCTCCCCCATGGATGTTATCTCCCACATTCCC
GTTCTGTGCGAGGACCACGGAATTCCCTACGTCTTTGTCACCTCCCGTGCTGAGCTTGGTGCTTCCGCTGCCACC
AAGCGCCCTACCAGTGTGGTCATGGTTACCCCCAAGGCTGCCAAGGGCAAGAAGGAGGATGATGAGGAGTTCACC
AAGGTCTTCGAGGAGCTTGCTGGCTTGGCCCAGAAGGAGATCAAGAAGCTGACAGTCTAA
Gene >Pro_DTO377G3_2|g1979.t1
ATGGGCAAGGACAAGGTCGAGAAGAAGGACCGTGCTGAGAAGAAGGAGAAGCGCGCGGACAAGGACGGTGTGCAC
AAGGTCAAGAAGGAGAAGAAAGAGAAGAAGGATAAGACTACTCTTGTCGATGCAGTAGAGAAGGAGATTGTCTCC
GAGCCCATGGAGGGTCTCGAGCAGACCGCTGTTGTCAAGAGTGAGGTCGACGCCGTTGTCCCCATTGGCGCCCTC
GTGCCGTTCGCCCACCCATTGGTTGAGGACAAGCAGGCCAAGAAGGTTTTGAAGAGTGTCAAGAAGGGTACGTGG
ATTGTCTTTTTAAGTTTTTACTTGCCTCTTTTACTATCTGTGCGCATGGTCGATTTTCATCGGATTTGGATCGCC
CATATTCACTGATCGCATGATTGCGCGACTTTTTTTTCTTATCTCCAGATTCTCCATGCTAACCTTAGTTCTTCT
AGCTGCCGTCAACAAGTCTCTCAAGCGTGGTGTCAAGGAAGTCGTCAAGGCTCTCCGCAAGTCTCCCATCCCCGC
TGCCAATGCTGCCATCGGTGTCCCTAGCGGTGTCGTCGTTCTCGCTGCCGATATCTCCCCCATGGATGTTATCTC
CCACATTCCCGTTCTGTGCGAGGACCACGGAATTCCCTACGTCTTTGTCACCTCCCGTGCTGAGCTTGGTGCTTC
CGCTGCCACCAAGCGCCCTACCAGTGTGGTCATGGTTACCCCCAAGGCTGCCAAGGGCAAGAAGGAGGATGATGA
GGAGTTCACCAAGGTCTTCGAGGAGCTTGCTGGCTTGGCCCAGAAGGAGATCAAGAAGCTGACAGTCTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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