Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g1962.t1
Gene name
Locationscaffold_02:1294899..1296477
Strand-
Gene length (bp)1578
Transcript length (bp)1578
Coding sequence length (bp)1578
Protein length (aa) 526

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF13520 AA_permease_2 Amino acid permease 7.9E-60 27 472
PF00324 AA_permease Amino acid permease 2.7E-32 42 481

GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0016020 membrane Yes
GO:0008150 biological_process No
GO:0051234 establishment of localization No
GO:0006810 transport No
GO:0005575 cellular_component No
GO:0051179 localization No
GO:0005215 transporter activity No
GO:0003674 molecular_function No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 39 0.5

Transmembrane Domains

Domain # Start End Length
1 30 52 22
2 62 93 31
3 114 136 22
4 151 173 22
5 182 201 19
6 221 243 22
7 263 285 22
8 311 333 22
9 366 388 22
10 392 414 22
11 427 449 22
12 464 483 19

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g1962.t1
MRSSSVDASADEALARMGYKSELPRNLSMLSILGLSFAIMAAPFGLSTTLYITLSDGLSVTILWGWVFVSLISIA
IAASLAEICAVYPTAGGVYYWSAMLSTRRWAPLMSFIDGWLTLVGNWTVTLSIIFSGGQLILSAISIFNESFVAN
AWQTVLMFWAVMLVCALVNIFFSRYLDLINKVCIFWTAASVIIILVTLLTMADNRRDADFVFAHYDSSTSGWPAG
WAFFVGLLQAAYTLTGYGMVAAMCEEVQNPHREVPKAIVLSVVAAGITGLFYLIPILFVMPNVQMLREVASGQPI
GLLFKTVTGSAGGGFGLLFLILGIMMFAGIGSLTAASRCTYAFARDGAIPGFTLWRQVNTKLDVPVWAIVLSAVV
DGLLGLIYFGSTAAFNSFTGVATICLSTSYGLPILISLIRGRQDVKNSSFSLGRFGFAINCVTIAWIVLAVALFC
MPVTLPVTPESMNYASAVFAGFGAISVIWYFAYARKHFTGPPISGDEARAATELMTGTPVDAEKPLQTMKKLPSE
*
Coding >Pro_DTO377G3_2|g1962.t1
ATGCGAAGTTCTTCTGTCGATGCCTCCGCCGACGAGGCATTGGCCCGTATGGGCTACAAGAGTGAATTGCCTCGA
AACCTGAGCATGCTGAGCATCCTCGGCTTATCCTTTGCCATCATGGCAGCTCCCTTCGGACTGAGCACGACCCTC
TACATCACCCTCTCCGACGGTCTATCCGTCACCATACTCTGGGGTTGGGTCTTCGTCTCCCTGATCTCAATCGCC
ATCGCCGCCTCTCTCGCCGAGATCTGCGCCGTTTACCCAACAGCAGGAGGCGTGTACTACTGGAGCGCGATGCTC
TCAACGCGTCGCTGGGCCCCATTGATGTCCTTCATCGACGGCTGGCTAACCCTCGTGGGCAATTGGACCGTCACA
CTGAGTATCATCTTCTCCGGCGGCCAATTGATCCTCAGCGCCATCTCCATCTTCAATGAGTCCTTCGTTGCCAAT
GCGTGGCAGACCGTATTGATGTTCTGGGCAGTCATGCTCGTCTGCGCCCTAGTCAACATCTTTTTCTCGCGTTAT
CTCGATCTCATCAACAAGGTCTGCATCTTCTGGACCGCAGCCAGTGTCATCATTATCCTTGTCACGCTTTTGACA
ATGGCCGACAACCGCAGAGACGCTGACTTTGTCTTCGCTCACTACGACTCCTCTACGAGCGGCTGGCCCGCTGGA
TGGGCTTTCTTCGTGGGTTTGCTGCAGGCGGCATACACCCTGACCGGCTACGGAATGGTCGCTGCCATGTGCGAA
GAGGTGCAGAACCCACACCGCGAGGTGCCCAAGGCAATCGTGCTATCCGTGGTGGCTGCTGGCATCACCGGCCTG
TTCTACTTGATCCCGATTCTGTTCGTGATGCCCAACGTGCAGATGCTGCGCGAGGTCGCCAGCGGCCAGCCGATC
GGCCTGCTCTTCAAGACAGTGACCGGCTCTGCAGGCGGTGGCTTCGGCTTACTCTTCCTGATTCTGGGGATCATG
ATGTTCGCCGGCATCGGGTCTCTCACAGCTGCCAGTCGCTGCACGTATGCGTTCGCTCGCGACGGCGCCATTCCG
GGCTTCACGCTCTGGCGGCAGGTGAACACCAAGCTGGATGTGCCTGTGTGGGCTATCGTGCTATCGGCCGTCGTG
GATGGATTGCTAGGACTGATCTATTTTGGTTCCACGGCTGCGTTCAACTCCTTCACCGGTGTGGCTACTATCTGT
CTGTCGACCTCGTACGGTCTCCCGATTTTGATCTCTTTGATTCGAGGCCGCCAAGACGTGAAGAATTCCTCGTTC
TCTCTCGGTCGCTTTGGATTCGCCATCAACTGCGTTACCATTGCGTGGATCGTGCTGGCTGTCGCTCTCTTCTGC
ATGCCCGTTACCTTGCCTGTTACCCCGGAGTCTATGAATTATGCCAGTGCTGTTTTCGCTGGATTCGGTGCTATT
AGTGTCATCTGGTACTTTGCCTATGCGCGCAAGCACTTTACTGGACCTCCGATTAGCGGTGACGAGGCGCGCGCC
GCCACCGAGTTGATGACGGGTACGCCAGTGGATGCGGAGAAACCGTTGCAGACGATGAAGAAGTTACCGAGCGAG
TAA
Transcript >Pro_DTO377G3_2|g1962.t1
ATGCGAAGTTCTTCTGTCGATGCCTCCGCCGACGAGGCATTGGCCCGTATGGGCTACAAGAGTGAATTGCCTCGA
AACCTGAGCATGCTGAGCATCCTCGGCTTATCCTTTGCCATCATGGCAGCTCCCTTCGGACTGAGCACGACCCTC
TACATCACCCTCTCCGACGGTCTATCCGTCACCATACTCTGGGGTTGGGTCTTCGTCTCCCTGATCTCAATCGCC
ATCGCCGCCTCTCTCGCCGAGATCTGCGCCGTTTACCCAACAGCAGGAGGCGTGTACTACTGGAGCGCGATGCTC
TCAACGCGTCGCTGGGCCCCATTGATGTCCTTCATCGACGGCTGGCTAACCCTCGTGGGCAATTGGACCGTCACA
CTGAGTATCATCTTCTCCGGCGGCCAATTGATCCTCAGCGCCATCTCCATCTTCAATGAGTCCTTCGTTGCCAAT
GCGTGGCAGACCGTATTGATGTTCTGGGCAGTCATGCTCGTCTGCGCCCTAGTCAACATCTTTTTCTCGCGTTAT
CTCGATCTCATCAACAAGGTCTGCATCTTCTGGACCGCAGCCAGTGTCATCATTATCCTTGTCACGCTTTTGACA
ATGGCCGACAACCGCAGAGACGCTGACTTTGTCTTCGCTCACTACGACTCCTCTACGAGCGGCTGGCCCGCTGGA
TGGGCTTTCTTCGTGGGTTTGCTGCAGGCGGCATACACCCTGACCGGCTACGGAATGGTCGCTGCCATGTGCGAA
GAGGTGCAGAACCCACACCGCGAGGTGCCCAAGGCAATCGTGCTATCCGTGGTGGCTGCTGGCATCACCGGCCTG
TTCTACTTGATCCCGATTCTGTTCGTGATGCCCAACGTGCAGATGCTGCGCGAGGTCGCCAGCGGCCAGCCGATC
GGCCTGCTCTTCAAGACAGTGACCGGCTCTGCAGGCGGTGGCTTCGGCTTACTCTTCCTGATTCTGGGGATCATG
ATGTTCGCCGGCATCGGGTCTCTCACAGCTGCCAGTCGCTGCACGTATGCGTTCGCTCGCGACGGCGCCATTCCG
GGCTTCACGCTCTGGCGGCAGGTGAACACCAAGCTGGATGTGCCTGTGTGGGCTATCGTGCTATCGGCCGTCGTG
GATGGATTGCTAGGACTGATCTATTTTGGTTCCACGGCTGCGTTCAACTCCTTCACCGGTGTGGCTACTATCTGT
CTGTCGACCTCGTACGGTCTCCCGATTTTGATCTCTTTGATTCGAGGCCGCCAAGACGTGAAGAATTCCTCGTTC
TCTCTCGGTCGCTTTGGATTCGCCATCAACTGCGTTACCATTGCGTGGATCGTGCTGGCTGTCGCTCTCTTCTGC
ATGCCCGTTACCTTGCCTGTTACCCCGGAGTCTATGAATTATGCCAGTGCTGTTTTCGCTGGATTCGGTGCTATT
AGTGTCATCTGGTACTTTGCCTATGCGCGCAAGCACTTTACTGGACCTCCGATTAGCGGTGACGAGGCGCGCGCC
GCCACCGAGTTGATGACGGGTACGCCAGTGGATGCGGAGAAACCGTTGCAGACGATGAAGAAGTTACCGAGCGAG
TAA
Gene >Pro_DTO377G3_2|g1962.t1
ATGCGAAGTTCTTCTGTCGATGCCTCCGCCGACGAGGCATTGGCCCGTATGGGCTACAAGAGTGAATTGCCTCGA
AACCTGAGCATGCTGAGCATCCTCGGCTTATCCTTTGCCATCATGGCAGCTCCCTTCGGACTGAGCACGACCCTC
TACATCACCCTCTCCGACGGTCTATCCGTCACCATACTCTGGGGTTGGGTCTTCGTCTCCCTGATCTCAATCGCC
ATCGCCGCCTCTCTCGCCGAGATCTGCGCCGTTTACCCAACAGCAGGAGGCGTGTACTACTGGAGCGCGATGCTC
TCAACGCGTCGCTGGGCCCCATTGATGTCCTTCATCGACGGCTGGCTAACCCTCGTGGGCAATTGGACCGTCACA
CTGAGTATCATCTTCTCCGGCGGCCAATTGATCCTCAGCGCCATCTCCATCTTCAATGAGTCCTTCGTTGCCAAT
GCGTGGCAGACCGTATTGATGTTCTGGGCAGTCATGCTCGTCTGCGCCCTAGTCAACATCTTTTTCTCGCGTTAT
CTCGATCTCATCAACAAGGTCTGCATCTTCTGGACCGCAGCCAGTGTCATCATTATCCTTGTCACGCTTTTGACA
ATGGCCGACAACCGCAGAGACGCTGACTTTGTCTTCGCTCACTACGACTCCTCTACGAGCGGCTGGCCCGCTGGA
TGGGCTTTCTTCGTGGGTTTGCTGCAGGCGGCATACACCCTGACCGGCTACGGAATGGTCGCTGCCATGTGCGAA
GAGGTGCAGAACCCACACCGCGAGGTGCCCAAGGCAATCGTGCTATCCGTGGTGGCTGCTGGCATCACCGGCCTG
TTCTACTTGATCCCGATTCTGTTCGTGATGCCCAACGTGCAGATGCTGCGCGAGGTCGCCAGCGGCCAGCCGATC
GGCCTGCTCTTCAAGACAGTGACCGGCTCTGCAGGCGGTGGCTTCGGCTTACTCTTCCTGATTCTGGGGATCATG
ATGTTCGCCGGCATCGGGTCTCTCACAGCTGCCAGTCGCTGCACGTATGCGTTCGCTCGCGACGGCGCCATTCCG
GGCTTCACGCTCTGGCGGCAGGTGAACACCAAGCTGGATGTGCCTGTGTGGGCTATCGTGCTATCGGCCGTCGTG
GATGGATTGCTAGGACTGATCTATTTTGGTTCCACGGCTGCGTTCAACTCCTTCACCGGTGTGGCTACTATCTGT
CTGTCGACCTCGTACGGTCTCCCGATTTTGATCTCTTTGATTCGAGGCCGCCAAGACGTGAAGAATTCCTCGTTC
TCTCTCGGTCGCTTTGGATTCGCCATCAACTGCGTTACCATTGCGTGGATCGTGCTGGCTGTCGCTCTCTTCTGC
ATGCCCGTTACCTTGCCTGTTACCCCGGAGTCTATGAATTATGCCAGTGCTGTTTTCGCTGGATTCGGTGCTATT
AGTGTCATCTGGTACTTTGCCTATGCGCGCAAGCACTTTACTGGACCTCCGATTAGCGGTGACGAGGCGCGCGCC
GCCACCGAGTTGATGACGGGTACGCCAGTGGATGCGGAGAAACCGTTGCAGACGATGAAGAAGTTACCGAGCGAG
TAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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