Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g1940.t1
Gene name
Locationscaffold_02:1229012..1230475
Strand-
Gene length (bp)1463
Transcript length (bp)1410
Coding sequence length (bp)1410
Protein length (aa) 470

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00487 FA_desaturase Fatty acid desaturase 3.2E-23 126 414

GO

GO Term Description Terminal node
GO:0006629 lipid metabolic process Yes
GO:0008150 biological_process No
GO:0044238 primary metabolic process No
GO:0008152 metabolic process No
GO:0071704 organic substance metabolic process No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 29 0.45

Transmembrane Domains

Domain # Start End Length
1 91 108 17
2 123 145 22
3 289 308 19
4 312 334 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g1940.t1
MSSTAIPKRVALNRNPATESSTTSSVSASPFDSPRQSPSSTSLSSMASEQEVSKMIDTYGNEFKIPDYTIKQIRD
AIPAHCFHRSAATSLYYVFRDLAILASVFYLFHNYVTPETVPFMPARVALWTLYTIVQGLFGTGVWVLAHECGHQ
AFSPSKVLNDTVGWICHSLLLVPYFSWKISHGKHHKATGNLARDMVFVPKTREQYATRVGKTLHELGELCEETPI
LTAANLLAQQLFGWPLYLLNNVTGHNNHARQPEGRGVGKYNGWGGGVNHFSPSSPLYEAKDAKLIVLSDLGLVLT
GTALYFIGSKFGWLNLLVWYGLPYLWVNHWLVAITFLQHTDPTLPHYQPEVWNFARGAAATIDRDFGFVGRHIFH
GIIETHVLHHYVSNIPFYNADEASDAIKGVMGDHYRTEAHTGWTGFFKAMWTAARVCHWVEPTEGAVGESKGVMF
YRNSNGIGIPPSKMVAKAQ*
Coding >Pro_DTO377G3_2|g1940.t1
ATGTCGTCGACCGCAATCCCCAAGCGCGTTGCGCTCAATCGCAACCCCGCTACAGAGTCCTCAACAACCAGCTCT
GTTTCGGCCTCGCCCTTTGACAGCCCTCGCCAGTCCCCCTCCTCTACCTCCCTTTCTTCCATGGCTTCGGAGCAG
GAGGTCAGCAAGATGATCGATACCTACGGTAACGAGTTCAAGATCCCAGACTACACCATCAAGCAGATCCGCGAT
GCCATTCCCGCTCACTGCTTCCACCGCTCCGCCGCCACAAGTTTGTACTATGTCTTCCGGGATCTGGCCATCCTT
GCCTCCGTCTTTTATCTCTTCCACAACTATGTCACCCCCGAGACGGTCCCCTTCATGCCAGCCCGCGTGGCCCTC
TGGACCTTGTACACCATCGTACAGGGTCTTTTCGGCACCGGCGTCTGGGTTCTGGCTCACGAGTGCGGTCACCAG
GCCTTCTCTCCCTCCAAGGTTCTGAACGACACTGTTGGCTGGATCTGCCACTCCCTCCTGCTTGTGCCCTACTTT
TCCTGGAAGATCTCCCACGGCAAGCACCACAAGGCCACTGGTAACCTGGCTCGCGACATGGTCTTCGTGCCCAAG
ACCCGTGAGCAGTACGCTACCCGCGTCGGCAAGACCCTGCACGAGCTCGGTGAGCTTTGCGAGGAGACTCCCATC
TTGACTGCCGCCAACCTTCTGGCCCAGCAGCTCTTCGGCTGGCCTCTGTACCTGCTCAACAACGTTACCGGCCAC
AACAACCACGCCCGCCAGCCCGAGGGCCGCGGTGTGGGCAAGTACAACGGCTGGGGCGGCGGTGTCAACCACTTC
AGCCCCTCCAGCCCTCTGTACGAGGCCAAGGACGCCAAGCTGATTGTCCTGAGTGACTTGGGTCTTGTCCTTACG
GGCACTGCCTTGTACTTCATCGGCTCCAAGTTCGGCTGGTTGAACCTGTTGGTCTGGTACGGTCTCCCGTACTTG
TGGGTGAACCACTGGCTCGTTGCCATTACATTCCTTCAGCACACCGACCCCACTCTCCCTCACTACCAGCCTGAA
GTGTGGAACTTCGCCCGCGGCGCTGCCGCTACCATCGACCGCGACTTCGGCTTCGTCGGCCGCCACATCTTCCAC
GGTATCATCGAGACCCACGTGCTGCACCACTATGTCAGCAACATCCCCTTCTACAACGCCGACGAGGCCAGCGAT
GCCATCAAGGGCGTCATGGGCGACCACTACCGCACTGAGGCTCACACCGGCTGGACTGGTTTCTTCAAGGCCATG
TGGACCGCCGCCCGTGTCTGCCACTGGGTTGAGCCCACCGAGGGTGCCGTTGGCGAGAGCAAGGGTGTCATGTTC
TACCGTAACAGCAACGGCATCGGCATTCCTCCTTCCAAGATGGTGGCCAAGGCTCAATAG
Transcript >Pro_DTO377G3_2|g1940.t1
ATGTCGTCGACCGCAATCCCCAAGCGCGTTGCGCTCAATCGCAACCCCGCTACAGAGTCCTCAACAACCAGCTCT
GTTTCGGCCTCGCCCTTTGACAGCCCTCGCCAGTCCCCCTCCTCTACCTCCCTTTCTTCCATGGCTTCGGAGCAG
GAGGTCAGCAAGATGATCGATACCTACGGTAACGAGTTCAAGATCCCAGACTACACCATCAAGCAGATCCGCGAT
GCCATTCCCGCTCACTGCTTCCACCGCTCCGCCGCCACAAGTTTGTACTATGTCTTCCGGGATCTGGCCATCCTT
GCCTCCGTCTTTTATCTCTTCCACAACTATGTCACCCCCGAGACGGTCCCCTTCATGCCAGCCCGCGTGGCCCTC
TGGACCTTGTACACCATCGTACAGGGTCTTTTCGGCACCGGCGTCTGGGTTCTGGCTCACGAGTGCGGTCACCAG
GCCTTCTCTCCCTCCAAGGTTCTGAACGACACTGTTGGCTGGATCTGCCACTCCCTCCTGCTTGTGCCCTACTTT
TCCTGGAAGATCTCCCACGGCAAGCACCACAAGGCCACTGGTAACCTGGCTCGCGACATGGTCTTCGTGCCCAAG
ACCCGTGAGCAGTACGCTACCCGCGTCGGCAAGACCCTGCACGAGCTCGGTGAGCTTTGCGAGGAGACTCCCATC
TTGACTGCCGCCAACCTTCTGGCCCAGCAGCTCTTCGGCTGGCCTCTGTACCTGCTCAACAACGTTACCGGCCAC
AACAACCACGCCCGCCAGCCCGAGGGCCGCGGTGTGGGCAAGTACAACGGCTGGGGCGGCGGTGTCAACCACTTC
AGCCCCTCCAGCCCTCTGTACGAGGCCAAGGACGCCAAGCTGATTGTCCTGAGTGACTTGGGTCTTGTCCTTACG
GGCACTGCCTTGTACTTCATCGGCTCCAAGTTCGGCTGGTTGAACCTGTTGGTCTGGTACGGTCTCCCGTACTTG
TGGGTGAACCACTGGCTCGTTGCCATTACATTCCTTCAGCACACCGACCCCACTCTCCCTCACTACCAGCCTGAA
GTGTGGAACTTCGCCCGCGGCGCTGCCGCTACCATCGACCGCGACTTCGGCTTCGTCGGCCGCCACATCTTCCAC
GGTATCATCGAGACCCACGTGCTGCACCACTATGTCAGCAACATCCCCTTCTACAACGCCGACGAGGCCAGCGAT
GCCATCAAGGGCGTCATGGGCGACCACTACCGCACTGAGGCTCACACCGGCTGGACTGGTTTCTTCAAGGCCATG
TGGACCGCCGCCCGTGTCTGCCACTGGGTTGAGCCCACCGAGGGTGCCGTTGGCGAGAGCAAGGGTGTCATGTTC
TACCGTAACAGCAACGGCATCGGCATTCCTCCTTCCAAGATGGTGGCCAAGGCTCAATAG
Gene >Pro_DTO377G3_2|g1940.t1
ATGTCGTCGACCGCAATCCCCAAGCGCGTTGCGCTCAATCGCAACCCCGCTACAGAGTCCTCAACAACCAGCTCT
GTTTCGGCCTCGCCCTTTGACAGCCCTCGCCAGTCCCCCTCCTCTACCTCCCTTTCTTCCATGGCTTCGGAGCAG
GAGGTCAGCAAGATGATCGATACCTACGGTAACGAGTTCAAGATCCCAGACTACACCATCAAGCAGATCCGCGAT
GCCATTCCCGCTCACTGCTTCCACCGCTCCGCCGCCACAAGTTTGTACTATGTCTTCCGGGATCTGGCCATCCTT
GCCTCCGTCTTTTATCTCTTCCACAACTATGTCACCCCCGAGACGGTCCCCTTCATGCCAGCCCGCGTGGCCCTC
TGGACCTTGTACACCATCGTACAGGGTCTTTTCGGCACCGGCGTCTGGGTTCTGGCTCACGAGTGCGGTCACCAG
GCCTTCTCTCCCTCCAAGGTTCTGAACGACACTGTTGGCTGGATCTGCCACTCCCTCCTGCTTGTGCCCTACTTT
TCCTGGAAGATCTCCCACGGCAAGCACCACAAGGCCACTGGTAACCTGGCTCGCGACATGGTCTTCGTGCCCAAG
ACCCGTGAGCAGTACGCTACCCGCGTCGGCAAGACCCTGCACGAGCTCGGTGAGCTTTGCGAGGAGACTCCCATC
TTGACTGCCGCCAACCTTCTGGCCCAGCAGCTCTTCGGCTGGCCTCTGTACCTGCTCAACAACGTTACCGGCCAC
AACAACCACGCCCGCCAGCCCGAGGGCCGCGGTGTGGGCAAGTACAACGGCTGGGGCGGCGGTGTCAACCACTTC
AGCCCCTCCAGCCCTCTGTACGAGGCCAAGGACGCCAAGCTGATTGTCCTGAGTGACTTGGGTCTTGTCCTTACG
GGCACTGCCTTGTACTTCATCGGCTCCAAGTTCGGCTGGTTGAACCTGTTGGTCTGGTACGGTCTCCCGTACTTG
TGGGTGAACCACTGGCTCGGTAAGTTTCAAATCTCGGTTCTCTCGGATCCCTTTTGCTAACAATATTTTCAGTTG
CCATTACATTCCTTCAGCACACCGACCCCACTCTCCCTCACTACCAGCCTGAAGTGTGGAACTTCGCCCGCGGCG
CTGCCGCTACCATCGACCGCGACTTCGGCTTCGTCGGCCGCCACATCTTCCACGGTATCATCGAGACCCACGTGC
TGCACCACTATGTCAGCAACATCCCCTTCTACAACGCCGACGAGGCCAGCGATGCCATCAAGGGCGTCATGGGCG
ACCACTACCGCACTGAGGCTCACACCGGCTGGACTGGTTTCTTCAAGGCCATGTGGACCGCCGCCCGTGTCTGCC
ACTGGGTTGAGCCCACCGAGGGTGCCGTTGGCGAGAGCAAGGGTGTCATGTTCTACCGTAACAGCAACGGCATCG
GCATTCCTCCTTCCAAGATGGTGGCCAAGGCTCAATAG

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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