Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g1934.t1
Gene name
Locationscaffold_02:1209143..1211119
Strand+
Gene length (bp)1976
Transcript length (bp)1644
Coding sequence length (bp)1644
Protein length (aa) 548

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF12701 LSM14 Scd6-like Sm domain 2.4E-27 6 79
PF09532 FDF FDF domain 6.9E-20 398 499

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 66 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g1934.t1
MEMNHLIGQRFNLISKSDIRYVGTLHEINPEASTIALENVMSFGSEGRRGNPAEEVPPSTSVYEYIVFRGSDVKD
ISIAGEDQKEPAPQEAPRVPDDPAILGGAKRPVPTQGPDPGLAPQTLPPQGPPQLPQGAGPSPPGYPPQHQFQQG
FYPPYGQRFGPPPPFPPGPGFPPYGAPPGWYPPPGHGFPPGPGQFQPPMPIGPGQQPGPPQLGPQQHGSQRPGPP
GAAPASKPTSELPIGDKLPSKSTSGNATPAAQNAPTPPNDSKPSVAEALQVPVSAAPVPQKNGRVMPAIPIAAPR
PAPPIANIPIAARGNNQSITDATAAATAAVAAAMAKLPQPGAQKQPGQAEGAVDALTQQMNHMRPYDNTRPPRGG
HHHPRGGRGGARPPQQSKKIEVPQSDYDFQTANAKFNKQDLVKEAIATGVPVAEAEVHAAEEAESMETMSNGGGS
SAHGYNRGSSFFDNISSEARDREENTTRVGGREWRGEEEKRNMETFGQGSVDGYRPNYRGRGRGRGFGRGRGGYS
RGYGRGRGGRVTSESTGVPSQG*
Coding >Pro_DTO377G3_2|g1934.t1
ATGGAAATGAATCACCTCATAGGTCAGCGTTTCAACCTGATCTCGAAAAGTGACATTCGTTATGTCGGTACTCTT
CACGAAATCAACCCCGAAGCCTCCACGATAGCTCTTGAGAATGTCATGTCATTCGGTTCAGAAGGGCGCCGCGGC
AACCCCGCCGAGGAAGTTCCCCCCTCCACCAGTGTTTACGAGTACATCGTCTTTCGAGGAAGTGATGTGAAGGAC
ATCAGCATTGCTGGGGAGGATCAAAAGGAGCCCGCACCGCAAGAAGCACCTCGGGTACCCGATGACCCTGCCATT
CTCGGGGGCGCGAAACGACCAGTTCCTACCCAAGGGCCTGACCCGGGACTTGCTCCACAGACTCTTCCTCCCCAG
GGCCCTCCCCAGCTGCCCCAGGGAGCTGGCCCAAGCCCTCCCGGTTACCCCCCGCAGCACCAATTCCAGCAAGGT
TTCTACCCCCCCTACGGACAGCGATTTGGACCACCTCCTCCGTTCCCTCCCGGTCCCGGTTTCCCCCCGTATGGT
GCTCCTCCCGGATGGTACCCGCCTCCGGGGCATGGATTCCCCCCCGGTCCTGGTCAATTCCAGCCGCCGATGCCC
ATTGGCCCTGGTCAGCAACCTGGACCTCCACAGCTTGGACCTCAGCAGCATGGTTCTCAGCGCCCGGGACCTCCC
GGTGCCGCACCCGCATCTAAGCCTACATCTGAACTCCCGATCGGGGACAAGCTTCCCAGCAAGTCTACGAGCGGT
AACGCAACCCCAGCCGCTCAGAACGCCCCCACTCCTCCAAACGACTCGAAGCCTAGTGTGGCCGAAGCTTTGCAG
GTTCCTGTTAGTGCTGCTCCTGTCCCTCAGAAGAATGGCCGAGTTATGCCAGCTATCCCAATCGCTGCCCCAAGG
CCTGCTCCTCCGATCGCCAACATTCCTATCGCCGCTCGGGGAAATAACCAGTCTATCACTGATGCCACCGCGGCT
GCCACCGCTGCCGTTGCTGCCGCCATGGCCAAGTTGCCTCAGCCTGGTGCTCAAAAGCAACCAGGACAGGCCGAA
GGTGCCGTGGATGCGCTTACGCAGCAGATGAATCACATGCGCCCTTACGACAACACCCGTCCTCCCCGAGGTGGT
CACCACCACCCTCGCGGTGGTCGCGGCGGCGCGCGTCCTCCGCAGCAGAGCAAGAAAATCGAAGTCCCCCAATCG
GATTACGATTTCCAAACTGCAAACGCCAAGTTCAACAAGCAGGATTTGGTGAAGGAGGCCATTGCCACTGGAGTT
CCCGTTGCTGAAGCCGAGGTCCATGCAGCCGAGGAGGCAGAATCCATGGAAACTATGTCAAACGGCGGCGGCTCT
TCGGCCCACGGCTACAACCGCGGTTCTTCCTTTTTCGACAATATCTCAAGTGAGGCTCGCGATCGTGAGGAGAAC
ACCACTCGTGTTGGTGGTCGTGAGTGGCGCGGCGAGGAGGAGAAACGCAATATGGAAACCTTCGGACAGGGTAGT
GTTGATGGCTACCGGCCCAACTACCGCGGTCGTGGCCGTGGCCGCGGCTTTGGTCGTGGTCGAGGTGGTTACAGC
CGTGGCTACGGCCGTGGCCGCGGTGGCCGGGTCACCTCTGAGTCCACTGGTGTCCCATCCCAGGGTTGA
Transcript >Pro_DTO377G3_2|g1934.t1
ATGGAAATGAATCACCTCATAGGTCAGCGTTTCAACCTGATCTCGAAAAGTGACATTCGTTATGTCGGTACTCTT
CACGAAATCAACCCCGAAGCCTCCACGATAGCTCTTGAGAATGTCATGTCATTCGGTTCAGAAGGGCGCCGCGGC
AACCCCGCCGAGGAAGTTCCCCCCTCCACCAGTGTTTACGAGTACATCGTCTTTCGAGGAAGTGATGTGAAGGAC
ATCAGCATTGCTGGGGAGGATCAAAAGGAGCCCGCACCGCAAGAAGCACCTCGGGTACCCGATGACCCTGCCATT
CTCGGGGGCGCGAAACGACCAGTTCCTACCCAAGGGCCTGACCCGGGACTTGCTCCACAGACTCTTCCTCCCCAG
GGCCCTCCCCAGCTGCCCCAGGGAGCTGGCCCAAGCCCTCCCGGTTACCCCCCGCAGCACCAATTCCAGCAAGGT
TTCTACCCCCCCTACGGACAGCGATTTGGACCACCTCCTCCGTTCCCTCCCGGTCCCGGTTTCCCCCCGTATGGT
GCTCCTCCCGGATGGTACCCGCCTCCGGGGCATGGATTCCCCCCCGGTCCTGGTCAATTCCAGCCGCCGATGCCC
ATTGGCCCTGGTCAGCAACCTGGACCTCCACAGCTTGGACCTCAGCAGCATGGTTCTCAGCGCCCGGGACCTCCC
GGTGCCGCACCCGCATCTAAGCCTACATCTGAACTCCCGATCGGGGACAAGCTTCCCAGCAAGTCTACGAGCGGT
AACGCAACCCCAGCCGCTCAGAACGCCCCCACTCCTCCAAACGACTCGAAGCCTAGTGTGGCCGAAGCTTTGCAG
GTTCCTGTTAGTGCTGCTCCTGTCCCTCAGAAGAATGGCCGAGTTATGCCAGCTATCCCAATCGCTGCCCCAAGG
CCTGCTCCTCCGATCGCCAACATTCCTATCGCCGCTCGGGGAAATAACCAGTCTATCACTGATGCCACCGCGGCT
GCCACCGCTGCCGTTGCTGCCGCCATGGCCAAGTTGCCTCAGCCTGGTGCTCAAAAGCAACCAGGACAGGCCGAA
GGTGCCGTGGATGCGCTTACGCAGCAGATGAATCACATGCGCCCTTACGACAACACCCGTCCTCCCCGAGGTGGT
CACCACCACCCTCGCGGTGGTCGCGGCGGCGCGCGTCCTCCGCAGCAGAGCAAGAAAATCGAAGTCCCCCAATCG
GATTACGATTTCCAAACTGCAAACGCCAAGTTCAACAAGCAGGATTTGGTGAAGGAGGCCATTGCCACTGGAGTT
CCCGTTGCTGAAGCCGAGGTCCATGCAGCCGAGGAGGCAGAATCCATGGAAACTATGTCAAACGGCGGCGGCTCT
TCGGCCCACGGCTACAACCGCGGTTCTTCCTTTTTCGACAATATCTCAAGTGAGGCTCGCGATCGTGAGGAGAAC
ACCACTCGTGTTGGTGGTCGTGAGTGGCGCGGCGAGGAGGAGAAACGCAATATGGAAACCTTCGGACAGGGTAGT
GTTGATGGCTACCGGCCCAACTACCGCGGTCGTGGCCGTGGCCGCGGCTTTGGTCGTGGTCGAGGTGGTTACAGC
CGTGGCTACGGCCGTGGCCGCGGTGGCCGGGTCACCTCTGAGTCCACTGGTGTCCCATCCCAGGGTTGA
Gene >Pro_DTO377G3_2|g1934.t1
ATGGAAATGAATCACCTCATAGGGTCAGTCTGAACCGGTTCGGAGTCAAGGTGGCCGGGAGTTAACATTTGGCAG
TCAGCGTTTCAACCTGATCTCGAAAAGTGACATTCGGTGAGTTTATCAGACTGTCAATTGTCTTCTCCGCCATTA
ATTGTCTTTTAGTTATGTCGGTACTCTTCACGAAATCAACCCCGAAGCCTCCACGATAGCTCTTGAGAATGTCAT
GTCATTCGGTTCAGAAGGGCGCCGCGGCAACCCCGCCGAGGAAGTTCCCCCCTCCACCAGTGTTTACGAGTACAT
CGTCTTTCGAGGAAGTGATGTGAAGGACATCAGCATTGCTGGGGAGGATCAAAAGGAGCCCGCACCGCAAGAAGC
ACCTCGGGTACCCGATGACCCTGCCATTCTCGGGGTAAGTCATCACAGCTCTTTCCTTGATCTACAACGTCATCC
CCCACAACCCACCGCACATTGTCTCGGCGAATTGATCAAGTGACGAGAAATTCTCGGATGTAAACACATATCTGT
CTGAATGCGCAAAACCATGTTGAGATTTCCGTTGCCTTCCTTCTGATGATCAATTCCCCTTGGACTTGTTTTCTG
TATCGTTTTGTATACAGCGTGCTGACTAGCACAAATAGGGCGCGAAACGACCAGTTCCTACCCAAGGGCCTGACC
CGGGACTTGCTCCACAGACTCTTCCTCCCCAGGGCCCTCCCCAGCTGCCCCAGGGAGCTGGCCCAAGCCCTCCCG
GTTACCCCCCGCAGCACCAATTCCAGCAAGGTTTCTACCCCCCCTACGGACAGCGATTTGGACCACCTCCTCCGT
TCCCTCCCGGTCCCGGTTTCCCCCCGTATGGTGCTCCTCCCGGATGGTACCCGCCTCCGGGGCATGGATTCCCCC
CCGGTCCTGGTCAATTCCAGCCGCCGATGCCCATTGGCCCTGGTCAGCAACCTGGACCTCCACAGCTTGGACCTC
AGCAGCATGGTTCTCAGCGCCCGGGACCTCCCGGTGCCGCACCCGCATCTAAGCCTACATCTGAACTCCCGATCG
GGGACAAGCTTCCCAGCAAGTCTACGAGCGGTAACGCAACCCCAGCCGCTCAGAACGCCCCCACTCCTCCAAACG
ACTCGAAGCCTAGTGTGGCCGAAGCTTTGCAGGTTCCTGTTAGTGCTGCTCCTGTCCCTCAGAAGAATGGCCGAG
TTATGCCAGCTATCCCAATCGCTGCCCCAAGGCCTGCTCCTCCGATCGCCAACATTCCTATCGCCGCTCGGGGAA
ATAACCAGTCTATCACTGATGCCACCGCGGCTGCCACCGCTGCCGTTGCTGCCGCCATGGCCAAGTTGCCTCAGC
CTGGTGCTCAAAAGCAACCAGGACAGGCCGAAGGTGCCGTGGATGCGCTTACGCAGCAGATGAATCACATGCGCC
CTTACGACAACACCCGTCCTCCCCGAGGTGGTCACCACCACCCTCGCGGTGGTCGCGGCGGCGCGCGTCCTCCGC
AGCAGAGCAAGAAAATCGAAGTCCCCCAATCGGATTACGATTTCCAAACTGCAAACGCCAAGTTCAACAAGCAGG
ATTTGGTGAAGGAGGCCATTGCCACTGGAGTTCCCGTTGCTGAAGCCGAGGTCCATGCAGCCGAGGAGGCAGAAT
CCATGGAAACTATGTCAAACGGCGGCGGCTCTTCGGCCCACGGCTACAACCGCGGTTCTTCCTTTTTCGACAATA
TCTCAAGTGAGGCTCGCGATCGTGAGGAGAACACCACTCGTGTTGGTGGTCGTGAGTGGCGCGGCGAGGAGGAGA
AACGCAATATGGAAACCTTCGGACAGGGTAGTGTTGATGGCTACCGGCCCAACTACCGCGGTCGTGGCCGTGGCC
GCGGCTTTGGTCGTGGTCGAGGTGGTTACAGCCGTGGCTACGGCCGTGGCCGCGGTGGCCGGGTCACCTCTGAGT
CCACTGGTGTCCCATCCCAGGGTTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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