© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g1919.t1 |
| Gene name | |
| Location | scaffold_02:1172104..1173840 |
| Strand | - |
| Gene length (bp) | 1736 |
| Transcript length (bp) | 1548 |
| Coding sequence length (bp) | 1548 |
| Protein length (aa) | 516 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF02133 | Transp_cyt_pur | Permease for cytosine/purines, uracil, thiamine, allantoin | 9.5E-17 | 76 | 494 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 59 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 78 | 97 | 19 |
| 2 | 112 | 134 | 22 |
| 3 | 147 | 169 | 22 |
| 4 | 184 | 206 | 22 |
| 5 | 219 | 238 | 19 |
| 6 | 258 | 280 | 22 |
| 7 | 293 | 315 | 22 |
| 8 | 335 | 357 | 22 |
| 9 | 378 | 400 | 22 |
| 10 | 410 | 427 | 17 |
| 11 | 452 | 474 | 22 |
| 12 | 489 | 508 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g1919.t1 MKLEDIEKADSSSTLECPSQSYLDKTASNSFSNDSVEKPDLVPQSRWQRWIASLKNVESSGIEPVPINKREPITP STILHMLLMWFSMTLATNNIIVGSMGTLVLGLSYRDAALCAVFGCLAGNFTVGFISIWGPKSGNRTLIVARYFMG YYPSKVCIILNLFTNIGYSMVNSVVGGQILSVVSGGHLSVIVGIIIIAVSSWVMALFGMKIFQLYERVAWLPQLL VICVMVGSAGPNFDFNIQTPMSTEQLMAKRLTFFSLALSIPLAWAPLAADYYVYLPPQMKSSRIFLATVFAATSA MSIVFLMGIGLGTVIASSAHLAAKYGSSPGGVLMTAYDGLGGFGKFCAVINVLALVANNTPGAYSMGMNLQMIGG IFGKVHRPVWTTLATVIYAACAMGGRDQLYEVFKSFLPLIGYWVMMFVVIVFEEHMIFRRNRGYDWSQWNCRDKL PLGIAAGVAFLIGWAGAIVGMSQAYYIGPIAQMAGGADLGLWLGAGFTMLFFPPLRAFELKLIGR* |
| Coding | >Pro_DTO377G3_2|g1919.t1 ATGAAGCTCGAAGATATCGAAAAAGCCGACAGCTCGAGTACTCTCGAGTGTCCGAGCCAGTCTTACCTCGACAAA ACCGCCTCGAATAGCTTCTCTAATGACTCCGTCGAAAAGCCTGACCTCGTGCCGCAATCAAGATGGCAACGATGG ATTGCAAGCTTGAAAAATGTGGAGAGCAGCGGAATCGAGCCCGTTCCTATCAACAAACGAGAGCCAATAACGCCT TCAACCATACTTCATATGCTGTTAATGTGGTTTAGCATGACATTGGCTACAAATAATATCATTGTTGGATCAATG GGTACGCTCGTCTTAGGCCTCAGCTACAGGGATGCGGCCCTCTGTGCTGTATTTGGATGTTTAGCCGGCAATTTC ACGGTTGGCTTTATAAGTATATGGGGACCGAAGAGCGGAAACAGGACTTTGATCGTGGCCCGATATTTCATGGGT TATTACCCCAGCAAAGTTTGCATTATCCTAAACCTCTTCACCAATATCGGGTACAGTATGGTAAACAGCGTCGTC GGTGGCCAGATTTTGTCCGTGGTCTCTGGTGGGCATCTTTCCGTGATAGTGGGCATTATCATCATCGCCGTTTCC AGCTGGGTTATGGCTCTGTTTGGGATGAAAATCTTCCAATTATATGAGCGAGTTGCCTGGTTGCCACAGCTGCTG GTGATATGCGTGATGGTGGGCTCAGCAGGGCCAAATTTCGACTTCAACATCCAGACACCAATGTCGACAGAGCAA CTAATGGCCAAAAGACTTACCTTCTTCTCCCTGGCCTTGTCCATTCCTCTCGCCTGGGCCCCGCTCGCCGCCGAT TACTATGTCTATCTCCCGCCGCAGATGAAGAGCTCCCGGATATTCCTAGCCACAGTCTTCGCCGCCACTAGTGCC ATGTCGATTGTTTTCCTCATGGGCATCGGACTCGGAACCGTTATCGCCAGCTCGGCACATCTTGCGGCCAAGTAC GGCAGCAGTCCCGGAGGCGTGCTGATGACAGCATACGACGGTCTCGGGGGGTTCGGGAAATTCTGTGCTGTTATC AATGTCCTCGCCTTGGTTGCTAATAACACTCCCGGGGCGTACTCGATGGGAATGAACCTCCAGATGATTGGCGGG ATATTTGGAAAGGTTCACCGACCGGTCTGGACGACTCTCGCTACGGTTATCTATGCTGCATGTGCGATGGGAGGC CGGGACCAGCTGTACGAGGTGTTCAAGTCTTTCCTGCCTCTGATTGGATACTGGGTCATGATGTTCGTTGTGATT GTCTTCGAGGAACACATGATTTTCCGTCGAAATAGAGGCTATGACTGGTCTCAGTGGAACTGTCGCGATAAATTG CCGTTGGGGATTGCAGCAGGAGTTGCTTTCCTTATCGGTTGGGCTGGTGCAATTGTCGGCATGTCTCAGGCGTAT TATATCGGCCCCATCGCGCAGATGGCTGGCGGAGCTGATCTGGGTCTCTGGTTGGGTGCGGGCTTCACTATGCTG TTTTTCCCACCGTTGCGGGCTTTCGAGCTCAAATTGATTGGTCGCTAG |
| Transcript | >Pro_DTO377G3_2|g1919.t1 ATGAAGCTCGAAGATATCGAAAAAGCCGACAGCTCGAGTACTCTCGAGTGTCCGAGCCAGTCTTACCTCGACAAA ACCGCCTCGAATAGCTTCTCTAATGACTCCGTCGAAAAGCCTGACCTCGTGCCGCAATCAAGATGGCAACGATGG ATTGCAAGCTTGAAAAATGTGGAGAGCAGCGGAATCGAGCCCGTTCCTATCAACAAACGAGAGCCAATAACGCCT TCAACCATACTTCATATGCTGTTAATGTGGTTTAGCATGACATTGGCTACAAATAATATCATTGTTGGATCAATG GGTACGCTCGTCTTAGGCCTCAGCTACAGGGATGCGGCCCTCTGTGCTGTATTTGGATGTTTAGCCGGCAATTTC ACGGTTGGCTTTATAAGTATATGGGGACCGAAGAGCGGAAACAGGACTTTGATCGTGGCCCGATATTTCATGGGT TATTACCCCAGCAAAGTTTGCATTATCCTAAACCTCTTCACCAATATCGGGTACAGTATGGTAAACAGCGTCGTC GGTGGCCAGATTTTGTCCGTGGTCTCTGGTGGGCATCTTTCCGTGATAGTGGGCATTATCATCATCGCCGTTTCC AGCTGGGTTATGGCTCTGTTTGGGATGAAAATCTTCCAATTATATGAGCGAGTTGCCTGGTTGCCACAGCTGCTG GTGATATGCGTGATGGTGGGCTCAGCAGGGCCAAATTTCGACTTCAACATCCAGACACCAATGTCGACAGAGCAA CTAATGGCCAAAAGACTTACCTTCTTCTCCCTGGCCTTGTCCATTCCTCTCGCCTGGGCCCCGCTCGCCGCCGAT TACTATGTCTATCTCCCGCCGCAGATGAAGAGCTCCCGGATATTCCTAGCCACAGTCTTCGCCGCCACTAGTGCC ATGTCGATTGTTTTCCTCATGGGCATCGGACTCGGAACCGTTATCGCCAGCTCGGCACATCTTGCGGCCAAGTAC GGCAGCAGTCCCGGAGGCGTGCTGATGACAGCATACGACGGTCTCGGGGGGTTCGGGAAATTCTGTGCTGTTATC AATGTCCTCGCCTTGGTTGCTAATAACACTCCCGGGGCGTACTCGATGGGAATGAACCTCCAGATGATTGGCGGG ATATTTGGAAAGGTTCACCGACCGGTCTGGACGACTCTCGCTACGGTTATCTATGCTGCATGTGCGATGGGAGGC CGGGACCAGCTGTACGAGGTGTTCAAGTCTTTCCTGCCTCTGATTGGATACTGGGTCATGATGTTCGTTGTGATT GTCTTCGAGGAACACATGATTTTCCGTCGAAATAGAGGCTATGACTGGTCTCAGTGGAACTGTCGCGATAAATTG CCGTTGGGGATTGCAGCAGGAGTTGCTTTCCTTATCGGTTGGGCTGGTGCAATTGTCGGCATGTCTCAGGCGTAT TATATCGGCCCCATCGCGCAGATGGCTGGCGGAGCTGATCTGGGTCTCTGGTTGGGTGCGGGCTTCACTATGCTG TTTTTCCCACCGTTGCGGGCTTTCGAGCTCAAATTGATTGGTCGCTAG |
| Gene | >Pro_DTO377G3_2|g1919.t1 ATGAAGCTCGAAGATATCGAAAAAGCCGACAGCTCGAGTACTCTCGAGTGTCCGAGCCAGTCTTACCTCGACAAA ACCGCCTCGAATAGCTTCTCTAATGACTCCGTCGAAAAGCCTGACCTCGTGCCGCAATCAAGATGGCAACGATGG ATTGCAAGCTTGAAAAATGTGGAGAGCAGCGGAATCGAGCCCGTTCCTATCAACAAACGAGAGCCAATAACGCCT TCAACCATACTTCATATGCTGTTAATGTGGTTTAGCATGACATTGGCTACAAATAATATCATTGTTGGATCAATG GGTACGCTCGTCTTAGGCCTCAGCTACAGGGATGCGGCCCTCTGTGCTGTATTTGGATGTTTAGCCGGCAATTTC ACGGTTGGCTTTATAAGTATATGGGGACCGAAGAGCGGAAACAGGACTTTGGTACGTATTGAAATATCGGTGATT CACGACACAAGGGAAAGAAGGTACTTTATAAGAACGGATGCTCATGCACTTGATAGATCGTGGCCCGATATTTCA TGGGTTATTACCCCAGCAAAGTTTGCATTATCCTAAACCTCTTCACCAATATCGGGTACAGTATGGTAAACAGCG TCGTCGGTGGCCAGATTTTGTCCGTGGTCTCTGGTGGGCATCTTTCCGTGATAGTGGGCATTATCATCATCGCCG TTTCCAGCTGGGTTATGGCTCTGTTTGGGATGAAAATCTTCCAATTATATGAGCGGTAAGTGTTGGCAGCCCAGG ATATCTTCAATGCATATTCTAATTAATACCAGAGTTGCCTGGTTGCCACAGCTGCTGGTGATATGCGTGATGGTG GGCTCAGCAGGGCCAAATTTCGACTTCAACATCCAGACACCAATGTCGACAGAGCAACTAATGGCCAAAAGACTT ACCTTCTTCTCCCTGGCCTTGTCCATTCCTCTCGCCTGGGCCCCGCTCGCCGCCGATTACTATGTCTATCTCCCG CCGCAGATGAAGAGCTCCCGGATATTCCTAGCCACAGTCTTCGCCGCCACTAGTGCCATGTCGATTGTTTTCCTC ATGGGCATCGGACTCGGAACCGTTATCGCCAGCTCGGCACATCTTGCGGCCAAGTACGGCAGCAGTCCCGGAGGC GTGCTGATGACAGCATACGACGGTCTCGGGGGGTTCGGGAAATTCTGTGCTGTTATCAATGTCCTCGCCTTGGTT GCTAATAACACTCCCGGGGCGTACTCGATGGGAATGAACCTCCAGATGATTGGCGGGATATTTGGAAAGGTTCAC CGACCGGTCTGGACGACTCTCGCTACGGTTATCTATGCTGCATGTGCGATGGGAGGCCGGGACCAGCTGTACGAG GTGTTCAAGTCTTTCCTGCCTCTGATTGGATACTGGGTCATGATGTTCGTTGTGATTGTCTTCGAGGAACACATG ATTTTCCGTCGAAATAGAGGCTATGACTGGTCTCAGTGGAACTGTCGCGATAAATTGCCGTTGGGGATTGCAGCA GGAGTTGCTTTCCTTATCGGTTGGGCTGGTGCAATTGTCGGCATGGTAAGACTTTATACTCCCAATCCAGTTAAC TGCGTCTTGCTAATACGTCAGTTTAGTCTCAGGCGTATTATATCGGCCCCATCGCGCAGATGGCTGGCGGAGCTG ATCTGGGTCTCTGGTTGGGTGCGGGCTTCACTATGCTGTTTTTCCCACCGTTGCGGGCTTTCGAGCTCAAATTGA TTGGTCGCTAG |