Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g1907.t1
Gene name
Locationscaffold_02:1138750..1139895
Strand+
Gene length (bp)1145
Transcript length (bp)915
Coding sequence length (bp)915
Protein length (aa) 305

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF16455 UBD Ubiquitin-binding domain 4.4E-42 56 155

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 45 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g1907.t1
MGCCASVLSHNVDNQTSHTQERISHTTATRDTSDRTTQPRQRTRHTASLPLNEHYNEPVRNHVWYSKRRTWTRAQ
LDRERTEFFETRVTGRPEIWAAVSTVISLIRNGDLATAQGILDAAGITVPTGDLCEGCYDEQGVLYRVPQCVVSD
PENIVPSSSRTASEDGGPARYEEEQDAGMLSDSKLADDDDADASGDELISQDVERRREEKGKTSERDLIRVLARL
SDRGGPDILLSIGKGQTVGFLARRVHQEAKLEDDRRVRIAYLGHLLNEREPLVDQGWKTGHVVNALISPVNDLNL
GHRS*
Coding >Pro_DTO377G3_2|g1907.t1
ATGGGCTGCTGCGCGTCAGTACTGTCGCATAATGTCGACAACCAAACCTCCCACACCCAAGAACGCATCTCACAT
ACAACAGCCACGAGGGATACCAGTGACCGCACCACGCAACCAAGGCAACGCACGCGGCACACCGCCAGCCTCCCT
CTAAACGAGCACTATAATGAGCCAGTGCGTAACCATGTGTGGTACAGTAAGCGACGGACATGGACGCGTGCGCAG
CTGGACCGCGAGCGCACCGAGTTCTTCGAGACGCGCGTTACCGGCAGGCCGGAGATATGGGCCGCTGTTTCCACG
GTGATATCGCTGATTCGCAACGGTGACTTGGCTACTGCGCAGGGTATTTTAGATGCGGCGGGCATTACTGTTCCC
ACCGGGGATCTTTGTGAGGGCTGCTACGATGAGCAAGGCGTGCTTTACAGGGTTCCACAATGTGTTGTTAGTGAT
CCGGAGAACATCGTTCCTTCGTCTTCGAGGACGGCTAGTGAGGATGGCGGCCCTGCTAGGTATGAGGAGGAGCAG
GATGCTGGGATGCTCTCAGATAGTAAGCTCGCTGATGATGATGATGCGGATGCTTCCGGGGACGAGTTAATTTCG
CAAGATGTTGAACGCCGCCGTGAGGAGAAGGGGAAGACGAGTGAACGGGATTTGATCCGTGTGCTTGCTCGATTG
AGTGATCGTGGAGGTCCGGATATACTGCTTTCCATTGGTAAGGGTCAGACTGTGGGATTTTTGGCGAGGAGAGTG
CATCAGGAAGCCAAGCTCGAGGATGATAGGCGCGTTCGAATCGCTTACCTAGGTCACTTGCTGAATGAGCGTGAA
CCGCTCGTTGACCAAGGGTGGAAGACTGGCCATGTTGTCAATGCTCTCATTTCCCCTGTTAATGATCTAAACCTT
GGACACCGATCTTAA
Transcript >Pro_DTO377G3_2|g1907.t1
ATGGGCTGCTGCGCGTCAGTACTGTCGCATAATGTCGACAACCAAACCTCCCACACCCAAGAACGCATCTCACAT
ACAACAGCCACGAGGGATACCAGTGACCGCACCACGCAACCAAGGCAACGCACGCGGCACACCGCCAGCCTCCCT
CTAAACGAGCACTATAATGAGCCAGTGCGTAACCATGTGTGGTACAGTAAGCGACGGACATGGACGCGTGCGCAG
CTGGACCGCGAGCGCACCGAGTTCTTCGAGACGCGCGTTACCGGCAGGCCGGAGATATGGGCCGCTGTTTCCACG
GTGATATCGCTGATTCGCAACGGTGACTTGGCTACTGCGCAGGGTATTTTAGATGCGGCGGGCATTACTGTTCCC
ACCGGGGATCTTTGTGAGGGCTGCTACGATGAGCAAGGCGTGCTTTACAGGGTTCCACAATGTGTTGTTAGTGAT
CCGGAGAACATCGTTCCTTCGTCTTCGAGGACGGCTAGTGAGGATGGCGGCCCTGCTAGGTATGAGGAGGAGCAG
GATGCTGGGATGCTCTCAGATAGTAAGCTCGCTGATGATGATGATGCGGATGCTTCCGGGGACGAGTTAATTTCG
CAAGATGTTGAACGCCGCCGTGAGGAGAAGGGGAAGACGAGTGAACGGGATTTGATCCGTGTGCTTGCTCGATTG
AGTGATCGTGGAGGTCCGGATATACTGCTTTCCATTGGTAAGGGTCAGACTGTGGGATTTTTGGCGAGGAGAGTG
CATCAGGAAGCCAAGCTCGAGGATGATAGGCGCGTTCGAATCGCTTACCTAGGTCACTTGCTGAATGAGCGTGAA
CCGCTCGTTGACCAAGGGTGGAAGACTGGCCATGTTGTCAATGCTCTCATTTCCCCTGTTAATGATCTAAACCTT
GGACACCGATCTTAA
Gene >Pro_DTO377G3_2|g1907.t1
ATGGTAAGAATCCAACCCCGACCATGAACCCCAGAAATTATACCTATGCCTATATTATCATCAATAAGACTGGCT
TGGCGTCGAACGTCACACGACCGAAAGCCCCGGCCGTCATCTCCATACCATGCCAACCCGCAATGGCCCCATAAC
CATAACTAACAAACCCCACAGGGCTGCTGCGCGTCAGTACTGTCGCATAATGTCGACAACCAAACCTCCCACACC
CAAGAACGCATCTCACATACAACAGCCACGAGGGATACCAGTGACCGCACCACGCAACCAAGGCAACGCACGCGG
CACACCGCCAGCCTCCCTCTAAACGAGCACTATAATGAGCCAGTGCGTAACCATGTGTGGTACAGTAAGCGACGG
ACATGGACGCGTGCGCAGCTGGACCGCGAGCGCACCGAGTTCTTCGAGACGCGCGTTACCGGCAGGCCGGAGATA
TGGGCCGCTGTTTCCACGGTGATATCGCTGATTCGCAACGGTGACTTGGCTACTGCGCAGGGTATTTTAGATGCG
GCGGGCATTACTGTTCCCACCGGGGATCTTTGTGAGGGCTGCTACGATGAGCAAGGCGTGCTTTACAGGGTTCCA
CAATGTGTTGTTAGTGATCCGGAGAACATCGTTCCTTCGTCTTCGAGGACGGCTAGTGAGGATGGCGGCCCTGCT
AGGTATGAGGAGGAGCAGGATGCTGGGATGCTCTCAGATAGTAAGCTCGCTGATGATGATGATGCGGATGCTTCC
GGGGACGAGTTAATTTCGCAAGATGTTGAACGCCGCCGTGAGGAGAAGGGGAAGACGAGTGAACGGGATTTGATC
CGTGTGCTTGCTCGATTGAGTGATCGTGGAGGTCCGGATATACTGCTTTCCATTGGTAAGGGTCAGACTGTGGGA
TTTTTGGCGAGGAGAGTGCATCAGGAAGCCAAGGTTGGTTTTTGTTACTGATCTGTTCATTTCGTTCTCTGGATT
ATTGCTAATTTGTTCTTTAGCTCGAGGATGATAGGCGCGTTCGAATCGCTTACCTAGGTCACTTGCTGAATGAGC
GTGAACCGCTCGTTGACCAAGGGTGGAAGACTGGCCATGTTGTCAATGCTCTCATTTCCCCTGTTAATGATCTAA
ACCTTGGACACCGATCTTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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