© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g1900.t1 |
| Gene name | |
| Location | scaffold_02:1117704..1119537 |
| Strand | - |
| Gene length (bp) | 1833 |
| Transcript length (bp) | 1665 |
| Coding sequence length (bp) | 1665 |
| Protein length (aa) | 555 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00324 | AA_permease | Amino acid permease | 1.1E-102 | 55 | 517 |
| PF13520 | AA_permease_2 | Amino acid permease | 3.6E-27 | 60 | 479 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016020 | membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 44 | 0.45 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 56 | 78 | 22 |
| 2 | 82 | 104 | 22 |
| 3 | 137 | 159 | 22 |
| 4 | 164 | 186 | 22 |
| 5 | 193 | 215 | 22 |
| 6 | 230 | 249 | 19 |
| 7 | 287 | 309 | 22 |
| 8 | 324 | 346 | 22 |
| 9 | 383 | 405 | 22 |
| 10 | 418 | 440 | 22 |
| 11 | 461 | 483 | 22 |
| 12 | 487 | 509 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g1900.t1 MCKNFDDHGINTPIASNPKVPHYEDGEMKETGDIENAAGQLKEIHQFRQGLHERHIQMIALAGTVGTGIFLSSGR AIVEAGPLGAFLAYTIIGATVASVVFGVGEMGALAPLNGGVIRYAEVFCDPALAFANGWNQVYSYTVSIPSEIVA AAVIIEFWITVNNAIWITVLGALMLSTAFVFVRVYGELEFGFSILKIMLIIGINIMALVITCGGGPDKTSIGFAY WKAPYGPFIQYLGVGGSLGRFLGFWKTFDNALFAYSGIENFTLAAAETRNPRQAIPMAARRIFIRILLFYVVTIF MVGLVVSSADPNLLGSSGTASQSPFVIAARHAGIKVVPSIINAVVLTSAWSSGNSNILGGSRILYGMATQGHAPA VFKRINRFGIPWVAVSLYGVFMALGYMSLSSSASTVFTWLQNLVSISTLVNLMCICIVYLRFYYGCKKQGIDRFK ELPWAAPFQPYITWISLIIYIILFFTGGFSTFMRGHWNTATFVSTYFNLPFIVIVYFAYKFWAKTKIIPLAEIPI RPFIESWHKNPEPMPKPKRGLAKLNILWS* |
| Coding | >Pro_DTO377G3_2|g1900.t1 ATGTGCAAAAATTTTGACGACCATGGCATTAACACCCCAATTGCGTCTAACCCGAAAGTTCCTCACTACGAAGAC GGGGAAATGAAAGAAACTGGCGATATAGAAAATGCTGCAGGCCAGCTCAAGGAGATTCACCAGTTCAGACAGGGT CTTCATGAGCGACACATTCAGATGATTGCCCTCGCCGGCACGGTGGGGACGGGTATTTTCCTCAGTTCGGGCCGT GCCATTGTGGAAGCTGGACCACTGGGTGCGTTCTTGGCGTACACAATTATTGGCGCTACGGTTGCGAGTGTCGTC TTCGGCGTTGGTGAAATGGGAGCCCTAGCACCTCTCAATGGCGGTGTTATTCGATACGCAGAGGTCTTCTGTGAC CCCGCGCTCGCGTTCGCCAACGGATGGAACCAAGTATACTCCTACACTGTGTCGATTCCGTCGGAAATTGTCGCT GCGGCTGTTATTATCGAGTTCTGGATCACTGTCAATAACGCAATATGGATTACTGTGCTTGGTGCCCTCATGCTT TCGACCGCGTTTGTCTTTGTTCGCGTGTACGGAGAGCTCGAGTTTGGCTTTTCGATCCTCAAAATTATGCTCATC ATAGGCATCAACATCATGGCTTTGGTGATTACCTGTGGAGGAGGCCCGGATAAGACGTCCATCGGATTTGCCTAC TGGAAAGCCCCCTATGGCCCCTTCATCCAGTACCTGGGAGTGGGTGGGTCCCTCGGCCGATTTTTAGGATTCTGG AAAACATTCGACAACGCTCTCTTCGCTTACTCTGGTATCGAAAACTTCACCCTCGCTGCAGCCGAGACGCGAAAT CCTCGTCAAGCTATTCCTATGGCCGCCAGACGTATCTTCATCCGAATTTTGCTCTTCTACGTGGTGACAATCTTC ATGGTTGGTCTGGTTGTTTCATCTGCCGATCCGAATCTTCTGGGCTCGTCCGGGACAGCCTCGCAGTCCCCTTTT GTTATCGCAGCTCGCCATGCTGGTATCAAGGTCGTTCCCTCGATTATCAACGCAGTTGTTCTCACGTCAGCATGG TCCTCCGGAAACAGCAATATCTTGGGTGGTTCCAGAATCCTATACGGCATGGCGACCCAGGGCCACGCCCCTGCT GTCTTCAAGCGTATCAACCGATTTGGTATCCCTTGGGTTGCAGTCTCACTCTATGGCGTTTTCATGGCACTCGGA TATATGAGTCTTTCCAGTTCGGCCAGTACGGTATTCACATGGCTGCAGAATCTTGTCTCGATCTCTACTCTAGTG AACTTGATGTGCATCTGCATTGTTTATCTTAGATTCTACTACGGATGCAAGAAGCAGGGAATCGATCGCTTCAAG GAGCTCCCGTGGGCAGCACCTTTTCAGCCATACATAACATGGATCTCCTTGATCATATACATTATTTTGTTCTTC ACTGGAGGGTTTTCGACATTTATGCGGGGCCATTGGAATACTGCAACCTTTGTTTCGACTTATTTCAACCTGCCG TTCATCGTTATTGTGTATTTTGCCTACAAATTCTGGGCAAAGACGAAGATCATCCCGCTGGCGGAAATTCCAATT CGGCCTTTCATCGAAAGCTGGCACAAAAATCCGGAGCCGATGCCGAAGCCAAAGCGCGGTCTTGCGAAACTCAAT ATTTTGTGGTCATGA |
| Transcript | >Pro_DTO377G3_2|g1900.t1 ATGTGCAAAAATTTTGACGACCATGGCATTAACACCCCAATTGCGTCTAACCCGAAAGTTCCTCACTACGAAGAC GGGGAAATGAAAGAAACTGGCGATATAGAAAATGCTGCAGGCCAGCTCAAGGAGATTCACCAGTTCAGACAGGGT CTTCATGAGCGACACATTCAGATGATTGCCCTCGCCGGCACGGTGGGGACGGGTATTTTCCTCAGTTCGGGCCGT GCCATTGTGGAAGCTGGACCACTGGGTGCGTTCTTGGCGTACACAATTATTGGCGCTACGGTTGCGAGTGTCGTC TTCGGCGTTGGTGAAATGGGAGCCCTAGCACCTCTCAATGGCGGTGTTATTCGATACGCAGAGGTCTTCTGTGAC CCCGCGCTCGCGTTCGCCAACGGATGGAACCAAGTATACTCCTACACTGTGTCGATTCCGTCGGAAATTGTCGCT GCGGCTGTTATTATCGAGTTCTGGATCACTGTCAATAACGCAATATGGATTACTGTGCTTGGTGCCCTCATGCTT TCGACCGCGTTTGTCTTTGTTCGCGTGTACGGAGAGCTCGAGTTTGGCTTTTCGATCCTCAAAATTATGCTCATC ATAGGCATCAACATCATGGCTTTGGTGATTACCTGTGGAGGAGGCCCGGATAAGACGTCCATCGGATTTGCCTAC TGGAAAGCCCCCTATGGCCCCTTCATCCAGTACCTGGGAGTGGGTGGGTCCCTCGGCCGATTTTTAGGATTCTGG AAAACATTCGACAACGCTCTCTTCGCTTACTCTGGTATCGAAAACTTCACCCTCGCTGCAGCCGAGACGCGAAAT CCTCGTCAAGCTATTCCTATGGCCGCCAGACGTATCTTCATCCGAATTTTGCTCTTCTACGTGGTGACAATCTTC ATGGTTGGTCTGGTTGTTTCATCTGCCGATCCGAATCTTCTGGGCTCGTCCGGGACAGCCTCGCAGTCCCCTTTT GTTATCGCAGCTCGCCATGCTGGTATCAAGGTCGTTCCCTCGATTATCAACGCAGTTGTTCTCACGTCAGCATGG TCCTCCGGAAACAGCAATATCTTGGGTGGTTCCAGAATCCTATACGGCATGGCGACCCAGGGCCACGCCCCTGCT GTCTTCAAGCGTATCAACCGATTTGGTATCCCTTGGGTTGCAGTCTCACTCTATGGCGTTTTCATGGCACTCGGA TATATGAGTCTTTCCAGTTCGGCCAGTACGGTATTCACATGGCTGCAGAATCTTGTCTCGATCTCTACTCTAGTG AACTTGATGTGCATCTGCATTGTTTATCTTAGATTCTACTACGGATGCAAGAAGCAGGGAATCGATCGCTTCAAG GAGCTCCCGTGGGCAGCACCTTTTCAGCCATACATAACATGGATCTCCTTGATCATATACATTATTTTGTTCTTC ACTGGAGGGTTTTCGACATTTATGCGGGGCCATTGGAATACTGCAACCTTTGTTTCGACTTATTTCAACCTGCCG TTCATCGTTATTGTGTATTTTGCCTACAAATTCTGGGCAAAGACGAAGATCATCCCGCTGGCGGAAATTCCAATT CGGCCTTTCATCGAAAGCTGGCACAAAAATCCGGAGCCGATGCCGAAGCCAAAGCGCGGTCTTGCGAAACTCAAT ATTTTGTGGTCATGA |
| Gene | >Pro_DTO377G3_2|g1900.t1 ATGTGCAAAAGTACGAGCGCTATTAACTTGCTATTCATTAGCTGATGTCTTCTCTTCTGCAAAGATTTTGTGACA CGCCACGGGGTTTTCAATGTCACACTATAAGACGAACCACGTTCTGAAGGACGACCATGGCATTAACACCCCAAT TGCGTCTAACCCGAAAGTTCCTCACTACGAAGACGGGGAAATGAAAGAAACTGGCGATATAGAAAATGCTGCAGG CCAGCTCAAGGAGATTCACCAGTTCAGACAGGGTCTTCATGAGCGACACATTCAGATGATTGCCCTCGCCGGCAC GGTGGGGACGGGTATTTTCCTCAGTTCGGGCCGTGCCATTGTGGAAGCTGGACCACTGGGTGCGTTCTTGGCGTA CACAATTATTGGCGCTACGGTTGCGAGTGTCGTCTTCGGCGTTGGTGAAATGGGAGCCCTAGCACCTCTCAATGG CGGTGTTATTCGATACGCAGAGGTCTTCTGTGACCCCGCGCTCGCGTTCGCCAACGGATGGAACCAAGTATACTC CTACACTGTGTCGATTCCGTCGGAAATTGTCGCTGCGGCTGTTATTATCGAGTTCTGGATCACTGTCAATAACGC AATATGGATTACTGTGCTTGGTGCCCTCATGCTTTCGACCGCGTTTGTCTTTGTTCGCGTGTACGGAGAGCTCGA GTTTGGCTTTTCGATCCTCAAAATTATGCTCATCATAGGCATCAACATCATGGCTTTGGTGATTACGCTCTTCAG GCTGGGAATGTGTTTACTTTGAGTGCTAATCCATCTTGACAGGTGATTACCTGTGGAGGAGGCCCGGATAAGACG TCCATCGGATTTGCCTACTGGAAAGCCCCCTATGGCCCCTTCATCCAGTACCTGGGAGTGGGTGGGTCCCTCGGC CGATTTTTAGGATTCTGGAAAACATTCGACAACGCTCTCTTCGCTTACTCTGGTATCGAAAACTTCACCCTCGCT GCAGCCGAGACGCGAAATCCTCGTCAAGCTATTCCTATGGCCGCCAGACGTATCTTCATCCGAATTTTGCTCTTC TACGTGGTGACAATCTTCATGGTTGGTCTGGTTGTTTCATCTGCCGATCCGAATCTTCTGGGCTCGTCCGGGACA GCCTCGCAGTCCCCTTTTGTTATCGCAGCTCGCCATGCTGGTATCAAGGTCGTTCCCTCGATTATCAACGCAGTT GTTCTCACGTCAGCATGGTCCTCCGGAAACAGCAATATCTTGGGTGGTTCCAGAATCCTATACGGCATGGCGACC CAGGGCCACGCCCCTGCTGTCTTCAAGCGTATCAACCGATTTGGTATCCCTTGGGTTGCAGTCTCACTCTATGGC GTTTTCATGGCACTCGGATATATGAGTCTTTCCAGTTCGGCCAGTACGGTATTCACATGGCTGCAGAATCTTGTC TCGATCTCTACTCTAGTGAACTTGATGTGCATCTGCATTGTTTATCTTAGATTCTACTACGGATGCAAGAAGCAG GGAATCGATCGCTTCAAGGAGCTCCCGTGGGCAGCACCTTTTCAGCCATACATAACATGGATCTCCTTGATCATA TACATTATTTTGTTCTTCACTGGAGGGTTTTCGACATTTATGCGGGGCCATTGGAATACTGCAACCTTTGTTTCG ACTTATTTCAACCTGCCGTTCATCGTTATTGTGTATTTTGCCTACAAATTCTGGGCAAAGACGAAGATCATCCCG CTGGCGGAAATTCCAATTCGGCCTTTCATCGAAAGCTGGCACAAAAATCCGGAGCCGATGCCGAAGCCAAAGCGC GGTCTTGCGAAACTCAATATTTTGTGGTCATGA |