Penicillium roqueforti LCP96 04111

General Properties

Protein ID	Pro_DTO377G3_2\|g190.t1
Gene name
Location	scaffold_01:498836..500022
Strand	+
Gene length (bp)	1186
Transcript length (bp)	1128
Coding sequence length (bp)	1128
Protein length (aa)	376

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF03850	Tfb4	Transcription factor Tfb4	4.1E-120	19	334

GO

GO Term	Description	Terminal node
GO:0006355	regulation of transcription, DNA-templated	Yes
GO:0006289	nucleotide-excision repair	Yes
GO:0000439	transcription factor TFIIH core complex	Yes
GO:0019219	regulation of nucleobase-containing compound metabolic process	No
GO:0009987	cellular process	No
GO:0043170	macromolecule metabolic process	No
GO:0034641	cellular nitrogen compound metabolic process	No
GO:0044238	primary metabolic process	No
GO:0051252	regulation of RNA metabolic process	No
GO:0044798	nuclear transcription factor complex	No
GO:2000112	regulation of cellular macromolecule biosynthetic process	No
GO:0006950	response to stress	No
GO:0033554	cellular response to stress	No
GO:0044260	cellular macromolecule metabolic process	No
GO:1901360	organic cyclic compound metabolic process	No
GO:0006281	DNA repair	No
GO:0006139	nucleobase-containing compound metabolic process	No
GO:0044446	intracellular organelle part	No
GO:0071704	organic substance metabolic process	No
GO:0080090	regulation of primary metabolic process	No
GO:0050794	regulation of cellular process	No
GO:1903506	regulation of nucleic acid-templated transcription	No
GO:0090304	nucleic acid metabolic process	No
GO:0065007	biological regulation	No
GO:0046483	heterocycle metabolic process	No
GO:0050789	regulation of biological process	No
GO:0044464	cell part	No
GO:0044428	nuclear part	No
GO:0010556	regulation of macromolecule biosynthetic process	No
GO:0005667	transcription factor complex	No
GO:0010468	regulation of gene expression	No
GO:0044237	cellular metabolic process	No
GO:0050896	response to stimulus	No
GO:0019222	regulation of metabolic process	No
GO:0044424	intracellular part	No
GO:0006259	DNA metabolic process	No
GO:0006725	cellular aromatic compound metabolic process	No
GO:0044422	organelle part	No
GO:0090575	RNA polymerase II transcription factor complex	No
GO:2001141	regulation of RNA biosynthetic process	No
GO:0009889	regulation of biosynthetic process	No
GO:0006807	nitrogen compound metabolic process	No
GO:0051716	cellular response to stimulus	No
GO:0008150	biological_process	No
GO:0051171	regulation of nitrogen compound metabolic process	No
GO:0060255	regulation of macromolecule metabolic process	No
GO:0031323	regulation of cellular metabolic process	No
GO:0032991	protein-containing complex	No
GO:0008152	metabolic process	No
GO:0005575	cellular_component	No
GO:0031326	regulation of cellular biosynthetic process	No
GO:0006974	cellular response to DNA damage stimulus	No

SignalP

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SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 35	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g190.t1 MNSVDASEHYELGATDLSPSLLTIVIDTNPHAWAALEDSLPLSKAIANILVFINAHLACNYANEVAVVASHSQKA AWLYPSHDDPRKRTADRDGDVVMNGASDTPAPETNKYRPFRIVEEQVTRNLKELMDSTTGDDLRGNMSTMLAGAL TLALSHTNRRTLAWAEEHGGANAEDAAADGNGGGGGTSTNRYSASNEDERLQSRILVVSVSGSTDAAHQYIPVMN SIFACQRLSIPIDVCKLSGDAVFLQQASDATKGVYMALAEPRGLLQYLMMAFLPDQRSRRHLVLPTRVDVDFRAA CFCHRRVVDVGFVCSICLSIFCEPPPGGDCMTCGTHLDIGDNAKPALLPRKKKKKKRVNGASGTGTPMSTPTPGP *
Coding	>Pro_DTO377G3_2\|g190.t1 ATGAATTCCGTGGATGCTTCGGAGCATTATGAGTTAGGAGCTACCGACCTCTCCCCATCCCTGCTCACCATAGTC ATCGACACAAACCCACACGCCTGGGCCGCACTGGAAGACTCCCTGCCACTCTCTAAAGCAATCGCCAACATCTTA GTCTTCATCAACGCCCACCTAGCATGCAACTATGCCAACGAAGTCGCCGTAGTCGCATCGCACAGTCAAAAAGCA GCATGGCTCTACCCATCCCACGATGATCCCCGAAAGCGCACCGCCGATCGCGACGGCGACGTCGTAATGAACGGC GCAAGCGACACCCCAGCCCCAGAAACGAACAAATACCGCCCCTTCCGCATCGTCGAAGAACAAGTCACCCGCAAT CTCAAAGAACTAATGGACTCGACGACTGGCGACGATCTACGCGGCAACATGTCCACGATGCTAGCGGGCGCGCTC ACCCTCGCCCTGAGCCACACCAACCGACGCACACTCGCCTGGGCGGAGGAGCACGGCGGCGCCAACGCCGAAGAT GCAGCGGCCGATGGCAACGGCGGGGGCGGGGGCACATCCACAAACCGGTACTCAGCCTCGAACGAGGACGAGCGG CTGCAGAGCCGCATCTTGGTTGTTTCTGTGAGCGGGTCTACCGATGCGGCCCACCAGTATATCCCTGTCATGAAC AGCATCTTTGCCTGCCAGCGCTTGAGCATCCCCATCGATGTGTGCAAGCTCAGTGGCGATGCGGTCTTCCTTCAG CAGGCGTCTGATGCTACCAAGGGAGTTTATATGGCTCTCGCCGAGCCGCGAGGCCTGCTGCAGTATCTGATGATG GCGTTTTTGCCTGATCAGCGCTCACGTCGTCATTTGGTTCTTCCGACTCGGGTGGATGTCGATTTTCGTGCTGCT TGCTTTTGTCATCGCCGAGTAGTTGATGTTGGCTTCGTCTGCTCCATTTGTCTCAGTATCTTCTGCGAGCCGCCC CCTGGTGGTGACTGCATGACTTGTGGCACGCATCTGGATATCGGAGACAATGCCAAGCCTGCTCTGTTGCCACGG AAAAAGAAGAAAAAGAAGCGTGTTAACGGGGCATCCGGAACGGGAACGCCCATGTCGACGCCTACGCCGGGTCCT TGA
Transcript	>Pro_DTO377G3_2\|g190.t1 ATGAATTCCGTGGATGCTTCGGAGCATTATGAGTTAGGAGCTACCGACCTCTCCCCATCCCTGCTCACCATAGTC ATCGACACAAACCCACACGCCTGGGCCGCACTGGAAGACTCCCTGCCACTCTCTAAAGCAATCGCCAACATCTTA GTCTTCATCAACGCCCACCTAGCATGCAACTATGCCAACGAAGTCGCCGTAGTCGCATCGCACAGTCAAAAAGCA GCATGGCTCTACCCATCCCACGATGATCCCCGAAAGCGCACCGCCGATCGCGACGGCGACGTCGTAATGAACGGC GCAAGCGACACCCCAGCCCCAGAAACGAACAAATACCGCCCCTTCCGCATCGTCGAAGAACAAGTCACCCGCAAT CTCAAAGAACTAATGGACTCGACGACTGGCGACGATCTACGCGGCAACATGTCCACGATGCTAGCGGGCGCGCTC ACCCTCGCCCTGAGCCACACCAACCGACGCACACTCGCCTGGGCGGAGGAGCACGGCGGCGCCAACGCCGAAGAT GCAGCGGCCGATGGCAACGGCGGGGGCGGGGGCACATCCACAAACCGGTACTCAGCCTCGAACGAGGACGAGCGG CTGCAGAGCCGCATCTTGGTTGTTTCTGTGAGCGGGTCTACCGATGCGGCCCACCAGTATATCCCTGTCATGAAC AGCATCTTTGCCTGCCAGCGCTTGAGCATCCCCATCGATGTGTGCAAGCTCAGTGGCGATGCGGTCTTCCTTCAG CAGGCGTCTGATGCTACCAAGGGAGTTTATATGGCTCTCGCCGAGCCGCGAGGCCTGCTGCAGTATCTGATGATG GCGTTTTTGCCTGATCAGCGCTCACGTCGTCATTTGGTTCTTCCGACTCGGGTGGATGTCGATTTTCGTGCTGCT TGCTTTTGTCATCGCCGAGTAGTTGATGTTGGCTTCGTCTGCTCCATTTGTCTCAGTATCTTCTGCGAGCCGCCC CCTGGTGGTGACTGCATGACTTGTGGCACGCATCTGGATATCGGAGACAATGCCAAGCCTGCTCTGTTGCCACGG AAAAAGAAGAAAAAGAAGCGTGTTAACGGGGCATCCGGAACGGGAACGCCCATGTCGACGCCTACGCCGGGTCCT TGA
Gene	>Pro_DTO377G3_2\|g190.t1 ATGAATTCCGTGGATGCTTCGGAGCATTATGAGTTAGGAGCTACCGGTCCGTATTCTCTACACTTACAAGAGGCG AACAACTGGCTAACCATATCGACATCCAGACCTCTCCCCATCCCTGCTCACCATAGTCATCGACACAAACCCACA CGCCTGGGCCGCACTGGAAGACTCCCTGCCACTCTCTAAAGCAATCGCCAACATCTTAGTCTTCATCAACGCCCA CCTAGCATGCAACTATGCCAACGAAGTCGCCGTAGTCGCATCGCACAGTCAAAAAGCAGCATGGCTCTACCCATC CCACGATGATCCCCGAAAGCGCACCGCCGATCGCGACGGCGACGTCGTAATGAACGGCGCAAGCGACACCCCAGC CCCAGAAACGAACAAATACCGCCCCTTCCGCATCGTCGAAGAACAAGTCACCCGCAATCTCAAAGAACTAATGGA CTCGACGACTGGCGACGATCTACGCGGCAACATGTCCACGATGCTAGCGGGCGCGCTCACCCTCGCCCTGAGCCA CACCAACCGACGCACACTCGCCTGGGCGGAGGAGCACGGCGGCGCCAACGCCGAAGATGCAGCGGCCGATGGCAA CGGCGGGGGCGGGGGCACATCCACAAACCGGTACTCAGCCTCGAACGAGGACGAGCGGCTGCAGAGCCGCATCTT GGTTGTTTCTGTGAGCGGGTCTACCGATGCGGCCCACCAGTATATCCCTGTCATGAACAGCATCTTTGCCTGCCA GCGCTTGAGCATCCCCATCGATGTGTGCAAGCTCAGTGGCGATGCGGTCTTCCTTCAGCAGGCGTCTGATGCTAC CAAGGGAGTTTATATGGCTCTCGCCGAGCCGCGAGGCCTGCTGCAGTATCTGATGATGGCGTTTTTGCCTGATCA GCGCTCACGTCGTCATTTGGTTCTTCCGACTCGGGTGGATGTCGATTTTCGTGCTGCTTGCTTTTGTCATCGCCG AGTAGTTGATGTTGGCTTCGTCTGCTCCATTTGTCTCAGTATCTTCTGCGAGCCGCCCCCTGGTGGTGACTGCAT GACTTGTGGCACGCATCTGGATATCGGAGACAATGCCAAGCCTGCTCTGTTGCCACGGAAAAAGAAGAAAAAGAA GCGTGTTAACGGGGCATCCGGAACGGGAACGCCCATGTCGACGCCTACGCCGGGTCCTTGA

Fungal Genomics

General Properties

PFAM Domains

GO

SignalP

Transmembrane Domains

Transcription Factor Class

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Sequences