Fungal Genomics

at Utrecht University

General Properties

Protein ID	Pro_DTO377G3_2\|g1894.t1
Gene name
Location	scaffold_02:1107432..1108182
Strand	-
Gene length (bp)	750
Transcript length (bp)	690
Coding sequence length (bp)	690
Protein length (aa)	230

PFAM Domains

PFAM Domain ID	Short name	Long name	E-value	Start	End
PF13460	NAD_binding_10	NAD(P)H-binding	7.9E-07	8	141
PF01370	Epimerase	NAD dependent epimerase/dehydratase family	3.6E-06	5	116

GO

(None)

SignalP

[Help with interpreting these statistics]

SignalP signal predicted	Location (based on Ymax)	D score (significance: > 0.45)
No	1 - 11	0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequence	Sequence
Locus	Download genbank file of locus The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein	>Pro_DTO377G3_2\|g1894.t1 MATAAVFGCTGAVGSQILATLLSSDAFSKVKTISRRLPNAQADKLEALEENDTSKWGDMISSLSPKPSVVFNAVG TTKATAGSIQNQWKIDHDLCVENARAAKEAGVKTYVFISSGGTRSLLWGWVPYSKMKVGVEDAIMEFNFENAIVL RPGMIIGREKSKSFLLEKFVEGLQKLGQGIQDKVGQDQTTIGRAAVAAARLVEEGKAPSSYWTLEQADIVRLGRD EWKE*
Coding	>Pro_DTO377G3_2\|g1894.t1 ATGGCGACGGCAGCGGTATTCGGCTGCACAGGAGCTGTAGGGTCTCAAATTCTGGCTACCCTTCTCTCATCGGAC GCATTTTCCAAAGTGAAGACCATCTCCAGAAGACTCCCGAATGCGCAGGCCGATAAGCTCGAAGCACTCGAGGAA AACGATACCTCAAAATGGGGAGACATGATCTCGTCTCTGTCCCCCAAGCCATCAGTGGTCTTTAACGCGGTCGGA ACTACCAAAGCAACAGCAGGCAGCATCCAGAACCAGTGGAAGATCGACCATGATTTATGCGTGGAGAACGCTCGA GCAGCTAAGGAGGCGGGCGTGAAGACGTACGTTTTCATTTCCAGCGGAGGCACGAGAAGCCTTCTCTGGGGCTGG GTCCCATACTCGAAAATGAAGGTTGGCGTCGAGGATGCCATCATGGAGTTTAACTTTGAGAATGCTATCGTTCTG AGACCCGGGATGATTATTGGGAGGGAGAAGTCGAAGTCTTTTCTTCTAGAGAAGTTTGTGGAAGGCCTTCAGAAG CTTGGCCAGGGTATCCAGGACAAAGTTGGTCAAGATCAAACTACTATTGGTAGAGCAGCTGTAGCAGCTGCTCGT TTGGTTGAAGAGGGCAAAGCCCCGTCGAGCTATTGGACTCTGGAACAGGCTGATATTGTTAGGCTCGGCAGAGAT GAGTGGAAGGAGTAA
Transcript	>Pro_DTO377G3_2\|g1894.t1 ATGGCGACGGCAGCGGTATTCGGCTGCACAGGAGCTGTAGGGTCTCAAATTCTGGCTACCCTTCTCTCATCGGAC GCATTTTCCAAAGTGAAGACCATCTCCAGAAGACTCCCGAATGCGCAGGCCGATAAGCTCGAAGCACTCGAGGAA AACGATACCTCAAAATGGGGAGACATGATCTCGTCTCTGTCCCCCAAGCCATCAGTGGTCTTTAACGCGGTCGGA ACTACCAAAGCAACAGCAGGCAGCATCCAGAACCAGTGGAAGATCGACCATGATTTATGCGTGGAGAACGCTCGA GCAGCTAAGGAGGCGGGCGTGAAGACGTACGTTTTCATTTCCAGCGGAGGCACGAGAAGCCTTCTCTGGGGCTGG GTCCCATACTCGAAAATGAAGGTTGGCGTCGAGGATGCCATCATGGAGTTTAACTTTGAGAATGCTATCGTTCTG AGACCCGGGATGATTATTGGGAGGGAGAAGTCGAAGTCTTTTCTTCTAGAGAAGTTTGTGGAAGGCCTTCAGAAG CTTGGCCAGGGTATCCAGGACAAAGTTGGTCAAGATCAAACTACTATTGGTAGAGCAGCTGTAGCAGCTGCTCGT TTGGTTGAAGAGGGCAAAGCCCCGTCGAGCTATTGGACTCTGGAACAGGCTGATATTGTTAGGCTCGGCAGAGAT GAGTGGAAGGAGTAA
Gene	>Pro_DTO377G3_2\|g1894.t1 ATGGCGACGGCAGCGGTATTCGGCTGCACAGGAGCTGTAGGGTCTCAAATTCTGGCTACCCTTCTCTCATCGGAC GCATTTTCCAAAGTGAAGACCATCTCCAGAAGACTCCCGAATGCGCAGGCCGATAAGCTCGAAGCACTCGAGGAA AACGATACCTCAAAATGGGGAGACATGATCTCGTCTCTGTCCCCCAAGCCATCAGTGGTCTTTAACGCGGTCGGA ACTACCAAAGCAACAGCAGGCAGCATCCAGAACCAGTGGAAGATCGACCATGATTTATGCGTGGAGAACGCTCGA GCAGCTAAGGAGGCGGGCGTGAAGACGTACGTTTTCATTTCCAGCGGAGGCACGAGAAGCCTTCTCTGGGGCTGG GTCCCATACTCGAAAATGAAGGTTGGCGTCGAGGATGCCATCATGGAGTTTAACTTTGAGAATGCTATCGTTCTG AGACCCGGGATGATTATTGGGAGGGAGAAGTCGAAGTCTTTTCTTCTAGAGAAGTTTGTGGAAGGCCTTCAGAAG CTTGGCCAGGGTATCCAGGACAAAGTTGGTATGGTTATGCTGATCACGCGAATGTTGACGAAGATTCAGAGCTAA CTGGCGCGAGCAGGTCAAGATCAAACTACTATTGGTAGAGCAGCTGTAGCAGCTGCTCGTTTGGTTGAAGAGGGC AAAGCCCCGTCGAGCTATTGGACTCTGGAACAGGCTGATATTGTTAGGCTCGGCAGAGATGAGTGGAAGGAGTAA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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