© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g1829.t1 |
| Gene name | |
| Location | scaffold_02:934539..935867 |
| Strand | - |
| Gene length (bp) | 1328 |
| Transcript length (bp) | 1107 |
| Coding sequence length (bp) | 1107 |
| Protein length (aa) | 369 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.3E-27 | 38 | 353 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 49 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 32 | 54 | 22 |
| 2 | 69 | 91 | 22 |
| 3 | 98 | 117 | 19 |
| 4 | 121 | 143 | 22 |
| 5 | 155 | 177 | 22 |
| 6 | 187 | 209 | 22 |
| 7 | 230 | 252 | 22 |
| 8 | 297 | 319 | 22 |
| 9 | 326 | 348 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g1829.t1 MAPIESKTTVAVSDEEEAVGQLDQGLPAWTVVFGAWCCLFCAFGWVNAIGIFQEHYQNNQLQSYSASSISWILSL EPFVLFATGIVIGRVFDNYGPKWLLLIGTCLHVFGIMMISISTEYYQFLLAQGICSPLGASFVFLSALSCTATWF EKRRALAFGIVSSGSSLGGVVFPSMLSRLLPSIGFGWSLRISGFIILTLLVTANLTVRSRIRNVPRPVKLNDYTS PFSELPFVLLVLASCCGFFAMFVPISYIVVEAQEDGVNGDLAGYLSTILNAASLPGRILPGYLGDKLGRFNVMIA MCSLSAIVILALWLPGTLLAPGSAAIYIVFSMLYGFASGAFVGMVPALLGQISPDVTKIGEVPLLEPS* |
| Coding | >Pro_DTO377G3_2|g1829.t1 ATGGCACCCATAGAATCGAAAACCACGGTGGCCGTCTCAGATGAGGAGGAAGCAGTTGGACAGTTGGATCAAGGA CTTCCTGCTTGGACGGTCGTCTTTGGAGCATGGTGCTGCCTTTTTTGCGCTTTTGGCTGGGTGAATGCCATTGGC ATTTTCCAAGAGCACTACCAGAATAATCAATTACAGTCCTATTCAGCGTCCAGCATCTCCTGGATTTTATCTTTG GAGCCATTTGTACTCTTTGCGACTGGAATTGTCATTGGAAGAGTATTCGATAATTATGGCCCAAAATGGCTTCTT CTTATTGGAACATGTCTTCACGTCTTTGGTATTATGATGATCTCCATATCGACGGAGTACTACCAATTCTTGCTA GCCCAGGGAATCTGCAGTCCTCTTGGTGCAAGCTTTGTCTTTTTGTCCGCACTCTCCTGTACCGCGACATGGTTC GAGAAACGACGTGCCTTGGCCTTTGGAATAGTTTCCAGCGGCTCATCACTGGGTGGCGTTGTATTCCCAAGCATG TTATCTCGACTTTTGCCTAGTATTGGGTTCGGATGGTCACTGCGTATCTCTGGATTCATCATCCTCACACTCCTG GTCACTGCCAACTTGACCGTCCGATCGAGAATAAGGAATGTTCCACGGCCAGTGAAACTGAATGATTATACGAGT CCATTTTCCGAGCTACCGTTTGTCTTGCTTGTGCTGGCATCCTGCTGTGGATTCTTCGCCATGTTCGTGCCAATC AGTTACATTGTCGTCGAAGCTCAGGAGGACGGTGTCAACGGCGACCTAGCCGGGTACTTGTCAACTATACTTAAT GCTGCCAGTCTCCCTGGTCGAATCCTACCAGGCTACCTAGGAGACAAACTAGGCCGATTCAACGTCATGATTGCC ATGTGCTCATTATCCGCCATTGTGATCCTAGCCTTATGGCTTCCAGGTACCCTTCTTGCCCCAGGCAGTGCGGCC ATCTATATTGTATTTAGCATGCTATATGGATTTGCATCGGGTGCATTTGTCGGTATGGTACCGGCCCTGCTAGGC CAGATCTCGCCCGACGTGACCAAGATTGGTGAAGTCCCATTGCTGGAGCCATCTTGA |
| Transcript | >Pro_DTO377G3_2|g1829.t1 ATGGCACCCATAGAATCGAAAACCACGGTGGCCGTCTCAGATGAGGAGGAAGCAGTTGGACAGTTGGATCAAGGA CTTCCTGCTTGGACGGTCGTCTTTGGAGCATGGTGCTGCCTTTTTTGCGCTTTTGGCTGGGTGAATGCCATTGGC ATTTTCCAAGAGCACTACCAGAATAATCAATTACAGTCCTATTCAGCGTCCAGCATCTCCTGGATTTTATCTTTG GAGCCATTTGTACTCTTTGCGACTGGAATTGTCATTGGAAGAGTATTCGATAATTATGGCCCAAAATGGCTTCTT CTTATTGGAACATGTCTTCACGTCTTTGGTATTATGATGATCTCCATATCGACGGAGTACTACCAATTCTTGCTA GCCCAGGGAATCTGCAGTCCTCTTGGTGCAAGCTTTGTCTTTTTGTCCGCACTCTCCTGTACCGCGACATGGTTC GAGAAACGACGTGCCTTGGCCTTTGGAATAGTTTCCAGCGGCTCATCACTGGGTGGCGTTGTATTCCCAAGCATG TTATCTCGACTTTTGCCTAGTATTGGGTTCGGATGGTCACTGCGTATCTCTGGATTCATCATCCTCACACTCCTG GTCACTGCCAACTTGACCGTCCGATCGAGAATAAGGAATGTTCCACGGCCAGTGAAACTGAATGATTATACGAGT CCATTTTCCGAGCTACCGTTTGTCTTGCTTGTGCTGGCATCCTGCTGTGGATTCTTCGCCATGTTCGTGCCAATC AGTTACATTGTCGTCGAAGCTCAGGAGGACGGTGTCAACGGCGACCTAGCCGGGTACTTGTCAACTATACTTAAT GCTGCCAGTCTCCCTGGTCGAATCCTACCAGGCTACCTAGGAGACAAACTAGGCCGATTCAACGTCATGATTGCC ATGTGCTCATTATCCGCCATTGTGATCCTAGCCTTATGGCTTCCAGGTACCCTTCTTGCCCCAGGCAGTGCGGCC ATCTATATTGTATTTAGCATGCTATATGGATTTGCATCGGGTGCATTTGTCGGTATGGTACCGGCCCTGCTAGGC CAGATCTCGCCCGACGTGACCAAGATTGGTGAAGTCCCATTGCTGGAGCCATCTTGA |
| Gene | >Pro_DTO377G3_2|g1829.t1 ATGGCACCCATAGAATCGAAAACCACGGTGGCCGTCTCAGATGAGGAGGAAGCAGTTGGACAGTTGGATCAAGGA CTTCCTGCTTGGACGGTCGTCTTTGGAGCATGGTGCTGCCTTTTTTGCGCTTTTGGCTGGGTGAATGGTGAGTCC TCCCATACCTATTTCTTATGCCACCGATAACCTGACACACTTCGCTCCAGCCATTGGCATTTTCCAAGAGCACTA CCAGAATAATCAATTACAGTCCTATTCAGCGTCCAGCATCTCCTGGATTTTATCTTTGGAGCCATTTGTACTCTT TGCGACTGGAATTGTCATTGGAAGAGTGAGTCTAGCCCCATCATGCCTGGAGGTATACATGTTAACCTTCTTCAG GTATTCGATAATTATGGCCCAAAATGGCTTCTTCTTATTGGAACATGTCTTCACGTCTTTGGTATTATGATGATC TCCATATCGACGGAGTACTACCAATTCTTGCTAGCCCAGGGAATCTGCAGTCCTCTTGGTGCAAGCTTTGTCTTT TTGTCCGCACTCTCCTGTACCGCGACATGGTTCGAGAAACGACGTGCCTTGGCCTTTGGAATAGTTTCCAGCGGC TCATCACTGGGTGGCGTTGTATTCCCAAGCATGTTATCTCGACTTTTGCCTAGTATTGGGTTCGGATGGTCACTG CGTATCTCTGGATTCATCATCCTCACACTCCTGGTCACTGCCAACTTGACCGTCCGATCGAGAATAAGGAATGTT CCACGGCCAGTGAAACTGAATGATTATACGAGTCCATTTTCCGAGCTACCGTTTGTCTTGCTTGTGCTGGCATCC TGCTGTGGATTCTTCGCCATGTTCGTGCCAATCAGTTACATTGTCGTCGAAGCTCAGGAGGACGGTGTCAACGGC GACCTAGCCGGGTACTTGTCAACTATACTTAATGCTGCCAGGTAAGTATTACTACTGTCTATCTTGACTTGACGA GAAGGGCCATTGTGCTAACCTAGTCTGCAGTCTCCCTGGTCGAATCCTACCAGGCTACCTAGGAGACAAACTAGG CCGATTCAACGTCATGATTGCCATGTGCTCATTATCCGCCATTGTGATCCTAGCCTTATGGCTTCCAGGTACCCT TCTTGCCCCAGGCAGTGCGGCCATCTATATTGTATTTAGCATGCTATATGGATTTGCATCGGGTGCATTTGTCGG TATGGTACCGGCCCTGCTAGGCCAGATCTCGCCCGACGTGACCAAGATTGGTGTTCGTCAGGGCGTTTTATTTAC TTGCATCAGTATTGCATCGCTCACAGGAAGTCCCATTGCTGGAGCCATCTTGA |