Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g180.t1
Gene name
Locationscaffold_01:468476..470524
Strand-
Gene length (bp)2048
Transcript length (bp)1704
Coding sequence length (bp)1704
Protein length (aa) 568

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF07690 MFS_1 Major Facilitator Superfamily 1.8E-17 111 490

GO

GO Term Description Terminal node
GO:0055085 transmembrane transport Yes
GO:0022857 transmembrane transporter activity Yes
GO:0008150 biological_process No
GO:0006810 transport No
GO:0009987 cellular process No
GO:0051234 establishment of localization No
GO:0005215 transporter activity No
GO:0003674 molecular_function No
GO:0051179 localization No

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 54 0.45

Transmembrane Domains

Domain # Start End Length
1 197 219 22
2 234 256 22
3 268 287 19
4 380 402 22
5 409 431 22
6 507 529 22

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

Expression values

Label Description Expression (RPKM) Confidence interval (low) Confidence interval (high)
3d_25C Three days - 25 degrees Celsius 0.01 0.0 0.1
5d_25C Five days - 25 degrees Celsius 0.00 0.0 0.0
7d_25C Seven days - 25 degrees Celsius 0.01 0.0 0.1
10d_25C Ten days - 25 degrees Celsius 0.00 0.0 0.0
7d_15C Seven days - 15 degrees Celsius 0.00 0.0 0.0
7d_30C Seven days - 30 degrees Celsius 0.00 0.0 0.0

Differential expression

Label1 Label2 Q-value Significant difference
3d_25C 5d_25C 1.0 no
3d_25C 7d_25C 1.0 no
3d_25C 7d_15C 1.0 no
3d_25C 7d_30C 1.0 no
3d_25C 10d_25C 1.0 no
5d_25C 7d_25C 1.0 no
5d_25C 7d_15C 1.0 no
5d_25C 7d_30C 1.0 no
5d_25C 10d_25C 1.0 no
7d_25C 7d_15C 1.0 no
7d_25C 7d_30C 1.0 no
7d_25C 10d_25C 1.0 no
7d_15C 7d_30C 1.0 no
7d_15C 10d_25C 1.0 no
7d_30C 10d_25C 1.0 no

Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g180.t1
MSTVYSTKKGPDESITVLKGTDTDSSTSLDIPPLGEPGDERRFWFQRGKDYNPEAIATQPSVFDNPDTAKEYQPR
ADWENLHRFDTSARWTWNEEYKLIRKIDLRIMVFACLMFMCLELDRSNLSQALTDNMLPELNMTTNDYNLGNTVF
KLSFLSAELPSQLVSKWVGPDRWIPTQMVLWSAVAMAQYGLNGRTTFLLCRALLGILQGGFIPDVILYLSYFYKH
HELSLRLGFFWTAMNIADILAAFLAFGFLHLRGVQGQSGWRWLFLLEGLLTLLFGLSAYILMPPGPCQTANWSRG
KSGWFTAREETIIVNRVIRDDPSKGTMHNREPITPKLLWKSLKDYDLWPLYIIGLTFQTPVVPPKQYLTLTLKGL
GFGTFVTNLLVIPSEVLSIIFLLLLTYASEICNQLTLVSTIGQIWMLPFLVYLYVIDINTANKWCVWAVITLLLS
YPNAHAIQVNWNSRNSNTVRSRTVSAAMYNMCVQSSGIIASNIYRADDAPRYRRGNGTLVGLVVSNVFIYLLTKV
YYVWRNQSRDKKWNAMTDNEKTNYLATTKDEGNKRLDFRFAH*
Coding >Pro_DTO377G3_2|g180.t1
ATGTCCACTGTATACAGCACAAAGAAAGGCCCGGATGAGTCTATAACAGTACTCAAAGGGACAGATACAGACTCA
TCTACCAGTCTTGACATCCCGCCGTTGGGTGAGCCAGGAGATGAACGTCGGTTTTGGTTTCAGCGAGGCAAAGAC
TACAACCCCGAAGCAATTGCGACTCAGCCGTCCGTTTTTGACAACCCGGACACCGCGAAGGAATATCAACCTCGA
GCCGACTGGGAGAATCTTCACCGATTTGACACCTCGGCTCGGTGGACATGGAACGAGGAATACAAATTGATCCGA
AAAATCGATCTCCGTATCATGGTATTTGCGTGTCTCATGTTCATGTGCTTGGAGTTGGATCGGTCGAATCTGTCA
CAAGCTCTAACCGACAACATGCTTCCCGAGTTGAACATGACCACAAATGACTACAATCTTGGAAATACGGTGTTC
AAGCTCTCATTCCTCAGTGCCGAGCTTCCCTCTCAGCTCGTCAGCAAATGGGTTGGACCTGATCGGTGGATTCCC
ACCCAAATGGTTCTTTGGTCTGCAGTTGCCATGGCACAGTATGGTCTGAATGGGAGAACGACTTTCCTCTTGTGC
CGCGCCCTGCTGGGTATTTTGCAAGGCGGGTTTATCCCAGATGTGATATTGTATCTGTCCTACTTTTATAAACAC
CATGAGCTGTCTTTACGACTCGGTTTCTTTTGGACGGCCATGAATATTGCGGATATTCTTGCTGCATTCCTCGCA
TTCGGATTTTTACATCTTCGTGGTGTGCAAGGTCAATCGGGATGGCGCTGGCTGTTTTTGCTGGAGGGCCTTCTG
ACACTTCTATTTGGTCTATCTGCATATATCCTGATGCCACCAGGACCATGCCAGACTGCTAATTGGTCTCGGGGT
AAATCGGGTTGGTTCACTGCCCGAGAGGAAACCATCATCGTCAATCGAGTAATTCGTGATGACCCAAGCAAAGGA
ACCATGCACAATCGAGAACCTATTACACCTAAACTACTCTGGAAAAGTCTCAAGGACTATGATCTCTGGCCGTTA
TACATCATCGGACTTACCTTCCAAACACCAGTGGTGCCCCCCAAGCAATACCTAACTCTGACTCTGAAAGGCCTC
GGATTCGGCACTTTCGTGACAAATCTCTTGGTCATTCCTAGCGAAGTGCTGTCTATTATCTTCCTCCTACTCCTC
ACATATGCATCGGAGATTTGTAACCAATTGACTTTGGTGTCTACGATCGGGCAAATATGGATGCTTCCTTTCTTG
GTCTATTTATATGTGATCGACATCAACACCGCGAACAAGTGGTGCGTGTGGGCGGTGATAACTCTGCTATTGTCA
TATCCAAATGCGCATGCTATTCAAGTCAACTGGAACTCCCGCAACTCAAACACTGTCCGATCCCGCACGGTCTCG
GCTGCCATGTATAACATGTGTGTCCAATCGTCGGGGATTATTGCTTCCAATATCTATCGCGCTGATGATGCTCCC
CGCTACCGGAGAGGCAATGGTACTCTGGTGGGACTCGTTGTTTCCAACGTGTTCATATACTTGTTGACCAAGGTA
TACTATGTCTGGCGCAATCAAAGCCGGGACAAGAAATGGAACGCTATGACGGACAACGAAAAGACGAACTATTTG
GCGACTACTAAGGACGAAGGAAATAAGCGACTGGATTTCCGATTCGCCCATTGA
Transcript >Pro_DTO377G3_2|g180.t1
ATGTCCACTGTATACAGCACAAAGAAAGGCCCGGATGAGTCTATAACAGTACTCAAAGGGACAGATACAGACTCA
TCTACCAGTCTTGACATCCCGCCGTTGGGTGAGCCAGGAGATGAACGTCGGTTTTGGTTTCAGCGAGGCAAAGAC
TACAACCCCGAAGCAATTGCGACTCAGCCGTCCGTTTTTGACAACCCGGACACCGCGAAGGAATATCAACCTCGA
GCCGACTGGGAGAATCTTCACCGATTTGACACCTCGGCTCGGTGGACATGGAACGAGGAATACAAATTGATCCGA
AAAATCGATCTCCGTATCATGGTATTTGCGTGTCTCATGTTCATGTGCTTGGAGTTGGATCGGTCGAATCTGTCA
CAAGCTCTAACCGACAACATGCTTCCCGAGTTGAACATGACCACAAATGACTACAATCTTGGAAATACGGTGTTC
AAGCTCTCATTCCTCAGTGCCGAGCTTCCCTCTCAGCTCGTCAGCAAATGGGTTGGACCTGATCGGTGGATTCCC
ACCCAAATGGTTCTTTGGTCTGCAGTTGCCATGGCACAGTATGGTCTGAATGGGAGAACGACTTTCCTCTTGTGC
CGCGCCCTGCTGGGTATTTTGCAAGGCGGGTTTATCCCAGATGTGATATTGTATCTGTCCTACTTTTATAAACAC
CATGAGCTGTCTTTACGACTCGGTTTCTTTTGGACGGCCATGAATATTGCGGATATTCTTGCTGCATTCCTCGCA
TTCGGATTTTTACATCTTCGTGGTGTGCAAGGTCAATCGGGATGGCGCTGGCTGTTTTTGCTGGAGGGCCTTCTG
ACACTTCTATTTGGTCTATCTGCATATATCCTGATGCCACCAGGACCATGCCAGACTGCTAATTGGTCTCGGGGT
AAATCGGGTTGGTTCACTGCCCGAGAGGAAACCATCATCGTCAATCGAGTAATTCGTGATGACCCAAGCAAAGGA
ACCATGCACAATCGAGAACCTATTACACCTAAACTACTCTGGAAAAGTCTCAAGGACTATGATCTCTGGCCGTTA
TACATCATCGGACTTACCTTCCAAACACCAGTGGTGCCCCCCAAGCAATACCTAACTCTGACTCTGAAAGGCCTC
GGATTCGGCACTTTCGTGACAAATCTCTTGGTCATTCCTAGCGAAGTGCTGTCTATTATCTTCCTCCTACTCCTC
ACATATGCATCGGAGATTTGTAACCAATTGACTTTGGTGTCTACGATCGGGCAAATATGGATGCTTCCTTTCTTG
GTCTATTTATATGTGATCGACATCAACACCGCGAACAAGTGGTGCGTGTGGGCGGTGATAACTCTGCTATTGTCA
TATCCAAATGCGCATGCTATTCAAGTCAACTGGAACTCCCGCAACTCAAACACTGTCCGATCCCGCACGGTCTCG
GCTGCCATGTATAACATGTGTGTCCAATCGTCGGGGATTATTGCTTCCAATATCTATCGCGCTGATGATGCTCCC
CGCTACCGGAGAGGCAATGGTACTCTGGTGGGACTCGTTGTTTCCAACGTGTTCATATACTTGTTGACCAAGGTA
TACTATGTCTGGCGCAATCAAAGCCGGGACAAGAAATGGAACGCTATGACGGACAACGAAAAGACGAACTATTTG
GCGACTACTAAGGACGAAGGAAATAAGCGACTGGATTTCCGATTCGCCCATTGA
Gene >Pro_DTO377G3_2|g180.t1
ATGTCCACTGTATACAGCACAAAGAAAGGCCCGGATGAGTCTATAACAGTACTCAAAGGGACAGATACAGACTCA
TCTACCAGTCTTGACATCCCGCCGTTGGGTGAGCCAGGAGATGAACGTCGGTTTTGGTTTCAGCGAGGCAAAGAC
TACAACCCCGAAGCAATTGCGACTCAGCCGTCCGTTTTTGACAACCCGGACACCGCGAAGGAATATCAACCTCGA
GCCGACTGGGAGAATCTTCACCGATTTGACACCTCGGCTCGGTGGACATGGAACGAGGAATACAAATTGATCCGA
AAAATCGATCTCCGTATCATGGTATTTGCGTGTCTCATGTTCATGTGCTTGGAGTTGGATCGGTCGAATCTGTCA
CAAGCTCTAACCGACAACATGCTTCCCGAGTTGAACATGACCACAAATGGTAAATAAAGCATCGGAGTTATCTTT
TTATCTTATGATATTCTAGGGCTGACAATAATAATTTCTATCTCCAGACTACAATCTTGGAAATACGGTGTTCAA
GCTCTCATTCCTCAGTGCCGAGCTTCCCTCTCAGCTCGTCAGCAAATGGGTTGGACCTGATCGGTGGATTCCCAC
CCAAATGGTTCTTTGGTCTGCAGTTGCCATGGCACAGTATGGTCTGAATGGGAGAACGACTTTCCTCTTGTGCCG
CGCCCTGCTGGGTATTTTGCAAGGCGGGTTTATCCCAGATGTAGGTTATTCGTGTTCTGGTTACGGGTCACTGCT
AACAGACTCAAAGGTGATATTGTATCTGTCCTACTTTTATAAACACCATGAGCTGTCTTTACGACTCGGTTTCTT
TTGGACGGCCATGAATATTGCGGATATTCTTGCTGCATTCCTCGCATTCGGATTTTTACATCTTCGTGGTGTGCA
AGGTCAATCGGGATGGCGCTGGCTGTTTTTGCTGGAGGTGAGTAGCCACCTCATTTAAATTTGATTGCAATCGGC
GCATTACTCACATCGAAGACAGGGCCTTCTGACACTTCTATTTGGTCTATCTGCATATATCCTGATGCCACCAGG
ACCATGCCAGACTGCTAATTGGTCTCGGGGTAAATCGGGTTGGTTCACTGCCCGGTAAGTTATCTCCCTTCTTAT
AGCAAACCGGATCGTTATTGACAGGATTGACAGAGAGGAAACCATCATCGTCAATCGAGTAATTCGTGATGACCC
AAGCAAAGGAACCATGCACAATCGAGAACCTATTACACCTAAACTACTCTGGAAAAGTCTCAAGGACTATGATCT
CTGGCCGTTATACATCATCGGACTTACCTTCCAAACACCAGTGGTGCCCCCCAAGCAATACCTAACTCTGACTCT
GAAAGGCCTCGGATTCGGCACTTTCGTGACAAATCTCTTGGTCATTCCTAGCGAAGTGCTGTCTATTATCTTCCT
CCTACTCCTCACATATGCATCGGAGATTTGTAACCAATTGACTTTGGTGTCTACGATCGGGCAAATATGGATGCT
TCCTTTCTTGGTCTATTTATATGTGATCGACATCAACACCGCGAACAAGTGGTGCGTGTGGGCGGTGATAACTCT
GCTATTGTCATATCCAAATGGTAAGCTCACCTGTTCAAATCTGCTTGAAATCATGGCTCACAAAATCACAGCGCA
TGCTATTCAAGTCAACTGGAACTCCCGCAACTCAAACACTGTCCGATCCCGCACGGTCTCGGCTGCCATGTATAA
CATGTGTGTCCAATCGTCGGGGATTATTGCTTCCAATATCTATCGCGCTGGTAGGTCATGAAATTCCTCATCTTT
TCTACATTTGCTCGGTATTCTAATTTGGATCAGATGATGCTCCCCGCTACCGGAGAGGCAATGGTACTCTGGTGG
GACTCGTTGTTTCCAACGTGTTCATATACTTGTTGACCAAGGTATACTATGTCTGGCGCAATCAAAGCCGGGACA
AGAAATGGAACGCTATGACGGACAACGAAAAGACGAACTATTTGGCGACTACTAAGGACGAAGGAAATAAGCGAC
TGGATTTCCGATTCGCCCATTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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