© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g1759.t1 |
| Gene name | |
| Location | scaffold_02:757887..759629 |
| Strand | - |
| Gene length (bp) | 1742 |
| Transcript length (bp) | 1299 |
| Coding sequence length (bp) | 1299 |
| Protein length (aa) | 433 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF05368 | NmrA | NmrA-like family | 6.5E-56 | 130 | 366 |
| PF13460 | NAD_binding_10 | NAD(P)H-binding | 1.8E-15 | 134 | 285 |
| PF00083 | Sugar_tr | Sugar (and other) transporter | 1.3E-11 | 49 | 119 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 29 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 12 | 34 | 22 |
| 2 | 54 | 76 | 22 |
| 3 | 85 | 107 | 22 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g1759.t1 MTTVAQKKKPYFGLTGGWLTFWITVACATDMTLFGYDQGVFIHDLVGPTKTTMLSTVTAIYDIGCFFGALVAFTI GEHLGRKKAILLGTTIMAVGGILQASSFSLAQMFVGRIVLGLGNDYCLSTMSKLITIFGATGNQGGSVIDAILAD TQLSKEFKIRGITRDTTKKSAQDLAKRGVDVVSADLGSVDTLTAALKGSHTVFLVTNYWETMNPDIEFSQGKNVT DVSKAIGVSHLIFSSLHHVTEETKGRLSHVPHFDSKASIEKYIRASGVGCSFVLPGYYMSNFTQMLSRAEDGSYQ LFYPVGKQAQFPLFDAAQDTGLFVRAAIKHAGQLKDKQILAAAKYYTPEEIVDTFSKVTGKKAVFVQVSSDQYKA SLPAAIADEYLENQLFVEEPGYYLGEPLEPSLSLLDSKPTTWEEFVKKNVSAWKQVT* |
| Coding | >Pro_DTO377G3_2|g1759.t1 ATGACTACCGTCGCGCAGAAGAAAAAGCCCTACTTCGGGTTAACAGGGGGATGGCTGACCTTCTGGATTACGGTG GCATGCGCAACCGATATGACCTTGTTCGGTTACGACCAAGGAGTCTTCATCCACGATCTGGTCGGGCCTACGAAG ACAACGATGCTATCCACGGTGACGGCGATATATGATATTGGCTGTTTCTTCGGAGCGCTTGTCGCATTCACTATT GGTGAGCATCTGGGCCGGAAGAAAGCTATCCTGCTGGGGACTACGATCATGGCAGTGGGAGGTATTCTTCAGGCG AGTTCGTTCAGTCTGGCGCAGATGTTCGTTGGCCGGATCGTCTTAGGCCTTGGAAACGATTACTGTTTATCCACC ATGTCTAAGTTGATCACTATTTTTGGCGCCACCGGAAACCAGGGTGGTTCCGTCATCGACGCCATTCTCGCCGAT ACCCAGCTCTCGAAGGAATTCAAGATCCGGGGTATCACCCGCGACACCACCAAGAAATCGGCACAGGACCTGGCC AAGCGCGGTGTCGATGTTGTCTCGGCCGATCTGGGCTCAGTCGACACTCTCACTGCGGCGTTGAAGGGATCCCAC ACTGTGTTCCTCGTCACCAACTACTGGGAGACTATGAACCCCGACATTGAGTTCTCCCAGGGCAAGAATGTGACC GATGTCTCCAAGGCTATTGGTGTTTCTCACCTGATATTCTCATCTCTCCACCATGTTACGGAGGAGACCAAGGGT CGCCTGAGCCATGTGCCTCATTTCGATAGCAAAGCCAGTATCGAGAAGTATATTCGTGCTTCGGGCGTTGGATGC AGCTTTGTCCTTCCCGGTTACTACATGAGCAACTTCACCCAGATGCTCAGTCGTGCTGAGGATGGGTCATACCAG CTTTTCTACCCGGTGGGAAAGCAGGCTCAATTCCCTCTCTTCGATGCGGCCCAGGATACAGGTCTCTTCGTGAGA GCTGCCATAAAGCACGCTGGCCAGCTGAAGGACAAGCAGATATTGGCCGCTGCGAAGTACTACACCCCCGAGGAG ATCGTGGACACCTTCTCCAAGGTGACTGGCAAGAAGGCTGTCTTCGTCCAAGTCTCTTCCGATCAATACAAGGCC TCCCTTCCTGCTGCTATCGCTGATGAGTACCTTGAGAACCAGCTATTTGTGGAGGAGCCTGGCTACTACCTCGGA GAACCCCTCGAGCCCAGCCTGAGCCTTCTCGATAGTAAGCCTACTACGTGGGAGGAGTTTGTGAAGAAGAACGTT TCTGCTTGGAAACAGGTCACTTGA |
| Transcript | >Pro_DTO377G3_2|g1759.t1 ATGACTACCGTCGCGCAGAAGAAAAAGCCCTACTTCGGGTTAACAGGGGGATGGCTGACCTTCTGGATTACGGTG GCATGCGCAACCGATATGACCTTGTTCGGTTACGACCAAGGAGTCTTCATCCACGATCTGGTCGGGCCTACGAAG ACAACGATGCTATCCACGGTGACGGCGATATATGATATTGGCTGTTTCTTCGGAGCGCTTGTCGCATTCACTATT GGTGAGCATCTGGGCCGGAAGAAAGCTATCCTGCTGGGGACTACGATCATGGCAGTGGGAGGTATTCTTCAGGCG AGTTCGTTCAGTCTGGCGCAGATGTTCGTTGGCCGGATCGTCTTAGGCCTTGGAAACGATTACTGTTTATCCACC ATGTCTAAGTTGATCACTATTTTTGGCGCCACCGGAAACCAGGGTGGTTCCGTCATCGACGCCATTCTCGCCGAT ACCCAGCTCTCGAAGGAATTCAAGATCCGGGGTATCACCCGCGACACCACCAAGAAATCGGCACAGGACCTGGCC AAGCGCGGTGTCGATGTTGTCTCGGCCGATCTGGGCTCAGTCGACACTCTCACTGCGGCGTTGAAGGGATCCCAC ACTGTGTTCCTCGTCACCAACTACTGGGAGACTATGAACCCCGACATTGAGTTCTCCCAGGGCAAGAATGTGACC GATGTCTCCAAGGCTATTGGTGTTTCTCACCTGATATTCTCATCTCTCCACCATGTTACGGAGGAGACCAAGGGT CGCCTGAGCCATGTGCCTCATTTCGATAGCAAAGCCAGTATCGAGAAGTATATTCGTGCTTCGGGCGTTGGATGC AGCTTTGTCCTTCCCGGTTACTACATGAGCAACTTCACCCAGATGCTCAGTCGTGCTGAGGATGGGTCATACCAG CTTTTCTACCCGGTGGGAAAGCAGGCTCAATTCCCTCTCTTCGATGCGGCCCAGGATACAGGTCTCTTCGTGAGA GCTGCCATAAAGCACGCTGGCCAGCTGAAGGACAAGCAGATATTGGCCGCTGCGAAGTACTACACCCCCGAGGAG ATCGTGGACACCTTCTCCAAGGTGACTGGCAAGAAGGCTGTCTTCGTCCAAGTCTCTTCCGATCAATACAAGGCC TCCCTTCCTGCTGCTATCGCTGATGAGTACCTTGAGAACCAGCTATTTGTGGAGGAGCCTGGCTACTACCTCGGA GAACCCCTCGAGCCCAGCCTGAGCCTTCTCGATAGTAAGCCTACTACGTGGGAGGAGTTTGTGAAGAAGAACGTT TCTGCTTGGAAACAGGTCACTTGA |
| Gene | >Pro_DTO377G3_2|g1759.t1 ATGACTACCGTCGCGCAGAAGAAAAAGCCCTACTTCGGGTTAACAGGGGGATGGCTGACCTTCTGGATTACGGTA TGACTAGAGGTATCTGTAGTGTTTGATCGGAATCAATTTGACTTGTTTTGTCTTAGGTGGCATGCGCAACCGATA TGACCTTGTTCGGTTACGACCAAGGAGTCTTCAGTGAGTGCTCTGGAGACTATGCAATCTTGAATTAACCTCTGA TTTCAATACATGCGGCGTTGTGATCACACAGGATTTTCTTGAAGTCCACGATCTGGTCGGGCCTACGAAGACAAC GATGCTATCCACGGTGACGGCGATATATGATATTGGCTGTTTCTTCGGAGCGCTTGTCGCATTCACTATTGGTGA GCATCTGGGCCGGAAGAAAGCTATCCTGCTGGGGACTACGATCATGGCAGTGGGAGGTATTCTTCAGGCGAGTTC GTTCAGTCTGGCGCAGATGTTCGTTGGCCGGATCGTCTTAGGGTAAGCCTTCTCTTCAAACCACTTTACTATCTT CTAACATCCCTTATAGCCTTGGAAACGGTAAATAAGAACACCAGACGCAACTGAGATACAATATTCTAACGAGAA TAGATTACTGTGTTATTGCCCAAATTCCTCTGTTCTCCAAGCTAAATCCATCAGTTATCCACCATGTCTAAGTTG ATCACTATTTTTGGCGCCACCGGAAACCAGGGTGGTTCCGTCATCGACGCCATTCTCGCCGATACCCAGCTCTCG AAGGAATTCAAGATCCGGGGTATCACCCGCGACACCACCAAGAAATCGGCACAGGACCTGGCCAAGCGCGGTGTC GATGTTGTCTCGGTAAGATGGGATTTCTTATTTCGTTTTACTCTTTTCACTTCCTTGTTGTCTTTGTGAATAATT ATCATAGGTAGAGAGACTAACATTCAAATAGGCCGATCTGGGCTCAGTCGACACTCTCACTGCGGCGTTGAAGGG ATCCCACACTGTGTTCCTCGTCACCAACTACTGGGAGACTATGAACCCCGACATTGAGTTCTCCCAGGGCAAGAA TGTGACCGATGTCTCCAAGGCTATTGGTGTTTCTCACCTGATATTCTCATCTCTCCACCATGTTACGGAGGAGAC CAAGGGTCGCCTGAGCCATGTGCCTCATTTCGATAGCAAAGCCAGTATCGAGAAGTATATTCGTGCTTCGGGCGT TGGATGCAGCTTTGTCCTTCCCGGTTACTACATGAGCAACTTCACCCAGATGCTCAGTCGTGCTGAGGATGGGTC ATACCAGCTTTTCTACCCGGTGGGAAAGCAGGCTCAATTCCCTCTCTTCGATGCGGCCCAGGATACAGGTGAGAC CTCTCCTAGCTCCCCTCTTTTTTTTTTATACGCATTAACTCACATATCCCCTAGGTCTCTTCGTGAGAGCTGCCA TAAAGCACGCTGGCCAGCTGAAGGACAAGCAGATATTGGCCGCTGCGAAGTACTACACCCCCGAGGAGATCGTGG ACACCTTCTCCAAGGTGACTGGCAAGAAGGCTGTCTTCGTCCAAGTCTCTTCCGATCAATACAAGGCCTCCCTTC CTGCTGCTATCGCTGATGAGTACCTTGAGAACCAGCTATTTGTGGAGGAGCCTGGCTACTACCTCGGAGAACCCC TCGAGCCCAGCCTGAGCCTTCTCGATAGTAAGCCTACTACGTGGGAGGAGTTTGTGAAGAAGAACGTTTCTGCTT GGAAACAGGTCACTTGA |