Fungal Genomics

at Utrecht University

General Properties

Protein IDPro_DTO377G3_2|g1738.t1
Gene name
Locationscaffold_02:712176..712938
Strand-
Gene length (bp)762
Transcript length (bp)555
Coding sequence length (bp)555
Protein length (aa) 185

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PFAM Domains

PFAM Domain ID Short name Long name E-value Start End
PF00179 UQ_con Ubiquitin-conjugating enzyme 1.5E-38 34 168

GO

(None)

SignalP

[Help with interpreting these statistics]
SignalP signal predicted Location
(based on Ymax)
D score
(significance: > 0.45)
No 1 - 30 0.45

Transmembrane Domains

(None)

Transcription Factor Class

(None)

Expression data

Analysis 1: Genome-wide gene expression in conidia of Penicillium roqueforti during growth at various temperatures and for various amounts of time. Published in Punt et al., 2020.

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Sequences

Type of sequenceSequence
Locus Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded.
Protein >Pro_DTO377G3_2|g1738.t1
MLKIWSMKQKQQEAENAEGAGGKKKKKVTAAQLRVQRDLQELTLGSTMKMSFPNPDDILNFTLTIEPDEGMYKGG
VFNFSFAVNQNFPHDPPKVKCTQKIYHPNIDLEGNVCLNILREDWKPVLNLNAVIVGMQFLFLEPNASDPLNKDA
AEDLRATRENFKKNVRTSMAGGTVRGISFDRVLR*
Coding >Pro_DTO377G3_2|g1738.t1
ATGTTGAAAATCTGGTCGATGAAGCAAAAGCAGCAGGAGGCTGAAAATGCCGAGGGTGCTGGAGGCAAGAAGAAG
AAGAAGGTCACCGCGGCGCAATTACGCGTGCAACGAGACCTTCAAGAACTCACCCTCGGCAGCACGATGAAAATG
TCTTTCCCGAACCCAGACGACATCCTTAACTTCACCTTGACTATCGAACCGGACGAGGGCATGTATAAGGGTGGC
GTCTTCAACTTTAGCTTTGCCGTCAATCAGAACTTCCCCCATGATCCCCCCAAGGTCAAATGCACGCAGAAGATC
TACCACCCCAATATCGACTTGGAGGGCAACGTCTGCTTAAATATTCTACGAGAGGACTGGAAGCCCGTGTTGAAT
TTGAATGCTGTCATTGTGGGCATGCAGTTCCTTTTCCTTGAGCCAAACGCCTCCGACCCTCTCAATAAGGACGCC
GCGGAAGATCTTCGCGCCACTCGTGAGAACTTCAAGAAAAACGTGCGCACCTCCATGGCCGGCGGGACCGTCCGA
GGCATATCATTTGATCGAGTGCTACGGTGA
Transcript >Pro_DTO377G3_2|g1738.t1
ATGTTGAAAATCTGGTCGATGAAGCAAAAGCAGCAGGAGGCTGAAAATGCCGAGGGTGCTGGAGGCAAGAAGAAG
AAGAAGGTCACCGCGGCGCAATTACGCGTGCAACGAGACCTTCAAGAACTCACCCTCGGCAGCACGATGAAAATG
TCTTTCCCGAACCCAGACGACATCCTTAACTTCACCTTGACTATCGAACCGGACGAGGGCATGTATAAGGGTGGC
GTCTTCAACTTTAGCTTTGCCGTCAATCAGAACTTCCCCCATGATCCCCCCAAGGTCAAATGCACGCAGAAGATC
TACCACCCCAATATCGACTTGGAGGGCAACGTCTGCTTAAATATTCTACGAGAGGACTGGAAGCCCGTGTTGAAT
TTGAATGCTGTCATTGTGGGCATGCAGTTCCTTTTCCTTGAGCCAAACGCCTCCGACCCTCTCAATAAGGACGCC
GCGGAAGATCTTCGCGCCACTCGTGAGAACTTCAAGAAAAACGTGCGCACCTCCATGGCCGGCGGGACCGTCCGA
GGCATATCATTTGATCGAGTGCTACGGTGA
Gene >Pro_DTO377G3_2|g1738.t1
ATGTTGAAAATCTGGTCGATGGTAGGGCTTTATTTGGCGCTTCTATAAAATCAAACTATTCCTAACCGTCTGTAC
AGAAGCAAAAGCAGCAGGAGGCTGAAAATGCCGAGGGTGCTGGAGGCAAGAAGAAGAAGAAGGTCACCGCGGCGC
AATTACGCGTGCAACGAGGTGAGTGACTCTCCCGCAGCGGACATTATTACTCTCGCTGCTTGATTAATGGCTTAT
TGTTATATATCTCTAACCTCTTGTTTTTCTTTAGACCTTCAAGAACTCACCCTCGGCAGCACGATGAAAATGTCT
TTCCCGAACCCAGACGACATCCTTAACTTCACCTTGACTATCGAACCGGACGAGGGCATGTATAAGGGTGGCGTC
TTCAACTTTAGCTTTGCCGTCAATCAGAACTTCCCCCATGATCCCCCCAAGGTCAAATGCACGCAGAAGATCTAC
CACCCCAATATCGACTTGGAGGGCAACGTCTGCTTAAATATTCTACGAGAGGACTGGAAGCCCGTGTTGAATTTG
AATGCTGTCATTGTGGGCATGCAGGTCCGTTGATGTCTTCCTTTTAACCGGTCGTTACTTGAGCTAACCCGTATT
CTACTGCAGTTCCTTTTCCTTGAGCCAAACGCCTCCGACCCTCTCAATAAGGACGCCGCGGAAGATCTTCGCGCC
ACTCGTGAGAACTTCAAGAAAAACGTGCGCACCTCCATGGCCGGCGGGACCGTCCGAGGCATATCATTTGATCGA
GTGCTACGGTGA

© 2022 - Robin Ohm - Utrecht University - The Netherlands

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