© 2022 - Robin Ohm - Utrecht University - The Netherlands
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| Protein ID | Pro_DTO377G3_2|g1706.t1 |
| Gene name | |
| Location | scaffold_02:647669..649573 |
| Strand | + |
| Gene length (bp) | 1904 |
| Transcript length (bp) | 1674 |
| Coding sequence length (bp) | 1674 |
| Protein length (aa) | 558 |
| PFAM Domain ID | Short name | Long name | E-value | Start | End |
|---|---|---|---|---|---|
| PF00083 | Sugar_tr | Sugar (and other) transporter | 4.9E-111 | 27 | 486 |
| PF07690 | MFS_1 | Major Facilitator Superfamily | 2.4E-13 | 71 | 230 |
| GO Term | Description | Terminal node |
|---|---|---|
| GO:0016021 | integral component of membrane | Yes |
| GO:0055085 | transmembrane transport | Yes |
| GO:0022857 | transmembrane transporter activity | Yes |
| GO:0008150 | biological_process | No |
| GO:0006810 | transport | No |
| GO:0009987 | cellular process | No |
| GO:0051234 | establishment of localization | No |
| GO:0110165 | cellular anatomical entity | No |
| GO:0005215 | transporter activity | No |
| GO:0003674 | molecular_function | No |
| GO:0005575 | cellular_component | No |
| GO:0031224 | intrinsic component of membrane | No |
| GO:0051179 | localization | No |
| SignalP signal predicted | Location (based on Ymax) |
D score (significance: > 0.45) |
|---|---|---|
| No | 1 - 20 | 0.5 |
| Domain # | Start | End | Length |
|---|---|---|---|
| 1 | 7 | 29 | 22 |
| 2 | 76 | 98 | 22 |
| 3 | 105 | 127 | 22 |
| 4 | 193 | 215 | 22 |
| 5 | 349 | 371 | 22 |
| 6 | 386 | 408 | 22 |
| 7 | 429 | 448 | 19 |
| 8 | 453 | 472 | 19 |
| Type of sequence | Sequence |
|---|---|
| Locus | Download genbank file of locus
The gene with 5 kb flanks (if sufficient flanking sequence is available). For use in cloning design programs. NOTE: features (genes or exons) that are only partially contained within the sequence are completely excluded. |
| Protein | >Pro_DTO377G3_2|g1706.t1 MQTRRFLGLNGTKLQIAIGFLAGMDFLLFGYDQGVTGGLLTLDSFVKYFPEINTLDSYTENWSSAAKSNQSTRQG ITVAAYNLGCFAGSIPTIWIGNILGRRKAIFVGSFIMCIGAILQCTSYGLAQLVIGRLVTGFGNGINTSTVPTWQ SECCKSHRRGQMVMIEGAMITCGITISYWIDFGLMFADPNEVAWRFPLAFQIFFAAIILGFVMFLPESPRWLILK GREEEAKEILACLMGDEADELFIDTEFTAIKATVLEMATGSFRDMFTMGEDRHFHRTMLAYVNQMFQQISGINLI TYYIPTLLEQQVGLDATTSRLISACNGTEYFIASWIAVFTVEKFGRRTLMLFGAVGMSISMAVLAIADSISSSHK QTSIGVKAGVAQTVFLFVFNTFFAIGWLGMTWLYPAEIVPLKIRAPANALSTSSNWIWNFMVVMITPVAFESIGY KTYVIFAVINAAIVPVVYFFFPETTMRSLEEMDRIFRKTTNVFNVVSLARTEPHMYGSNGELLRTLDDVEDDAVR RASFLNKESKVHHQSHTQHAEQYSDEHTSEVK* |
| Coding | >Pro_DTO377G3_2|g1706.t1 ATGCAGACCAGGCGGTTCTTGGGCCTCAACGGCACCAAGCTTCAGATCGCCATCGGCTTCTTGGCTGGCATGGAC TTCCTGCTGTTTGGTTATGATCAAGGCGTGACTGGTGGTTTGCTGACACTGGACTCTTTCGTCAAATATTTCCCC GAAATCAACACTCTAGATTCATATACCGAGAACTGGAGCTCAGCAGCAAAGAGCAACCAGTCAACCCGACAAGGT ATCACGGTCGCAGCGTACAACCTGGGATGTTTCGCTGGCTCGATTCCTACAATCTGGATCGGTAACATTTTGGGT CGTCGGAAGGCTATCTTTGTCGGTTCTTTTATTATGTGTATCGGTGCCATCCTTCAGTGCACATCCTACGGACTT GCTCAGCTTGTTATCGGTCGATTGGTCACTGGGTTCGGCAACGGAATCAACACCTCTACGGTCCCGACTTGGCAG TCAGAATGCTGCAAATCCCACCGACGAGGTCAGATGGTCATGATCGAGGGTGCCATGATCACATGCGGTATAACC ATCAGTTACTGGATCGATTTCGGATTGATGTTTGCAGACCCAAACGAAGTCGCTTGGAGATTCCCGCTGGCGTTC CAAATCTTCTTCGCCGCGATTATTCTGGGTTTCGTCATGTTCCTCCCCGAGTCACCCCGTTGGCTTATTCTAAAG GGTCGCGAGGAAGAAGCAAAAGAGATCCTGGCATGCTTGATGGGTGACGAGGCTGATGAGTTGTTCATCGACACC GAATTCACCGCTATCAAGGCTACTGTTCTCGAAATGGCAACGGGATCATTCCGGGACATGTTCACCATGGGCGAA GACCGTCATTTCCACCGCACTATGTTGGCATATGTCAACCAAATGTTCCAGCAAATTTCCGGCATCAACTTGATC ACCTACTATATTCCCACTCTTCTGGAGCAACAGGTCGGACTGGATGCCACGACTTCACGTCTTATCTCTGCATGT AATGGAACGGAATATTTCATCGCGTCCTGGATAGCCGTGTTCACAGTCGAAAAGTTTGGCCGTCGAACACTCATG CTCTTCGGTGCGGTGGGAATGTCGATTTCAATGGCGGTGCTTGCTATCGCCGACAGCATTTCCTCAAGCCACAAA CAGACCTCTATAGGTGTCAAGGCAGGTGTGGCACAGACAGTATTTCTGTTTGTGTTTAATACCTTTTTTGCCATC GGTTGGCTTGGGATGACTTGGTTGTATCCAGCCGAGATTGTCCCACTGAAGATTCGTGCCCCAGCTAATGCATTG TCTACTTCTTCGAACTGGATTTGGAACTTCATGGTTGTCATGATTACCCCTGTTGCTTTTGAAAGCATTGGTTAC AAGACCTATGTCATTTTCGCCGTGATCAATGCTGCCATCGTGCCCGTCGTCTATTTCTTCTTCCCCGAGACTACC ATGCGTTCATTGGAAGAGATGGACCGTATATTCCGCAAAACTACCAACGTCTTCAATGTGGTCTCGCTTGCTCGC ACTGAGCCCCATATGTATGGTTCAAATGGTGAACTCTTGCGTACTTTGGATGATGTCGAGGATGATGCTGTTCGT CGTGCCAGCTTCCTAAACAAGGAGAGTAAGGTTCACCACCAGAGCCACACTCAGCACGCAGAGCAATACAGCGAC GAACACACCAGCGAGGTGAAATGA |
| Transcript | >Pro_DTO377G3_2|g1706.t1 ATGCAGACCAGGCGGTTCTTGGGCCTCAACGGCACCAAGCTTCAGATCGCCATCGGCTTCTTGGCTGGCATGGAC TTCCTGCTGTTTGGTTATGATCAAGGCGTGACTGGTGGTTTGCTGACACTGGACTCTTTCGTCAAATATTTCCCC GAAATCAACACTCTAGATTCATATACCGAGAACTGGAGCTCAGCAGCAAAGAGCAACCAGTCAACCCGACAAGGT ATCACGGTCGCAGCGTACAACCTGGGATGTTTCGCTGGCTCGATTCCTACAATCTGGATCGGTAACATTTTGGGT CGTCGGAAGGCTATCTTTGTCGGTTCTTTTATTATGTGTATCGGTGCCATCCTTCAGTGCACATCCTACGGACTT GCTCAGCTTGTTATCGGTCGATTGGTCACTGGGTTCGGCAACGGAATCAACACCTCTACGGTCCCGACTTGGCAG TCAGAATGCTGCAAATCCCACCGACGAGGTCAGATGGTCATGATCGAGGGTGCCATGATCACATGCGGTATAACC ATCAGTTACTGGATCGATTTCGGATTGATGTTTGCAGACCCAAACGAAGTCGCTTGGAGATTCCCGCTGGCGTTC CAAATCTTCTTCGCCGCGATTATTCTGGGTTTCGTCATGTTCCTCCCCGAGTCACCCCGTTGGCTTATTCTAAAG GGTCGCGAGGAAGAAGCAAAAGAGATCCTGGCATGCTTGATGGGTGACGAGGCTGATGAGTTGTTCATCGACACC GAATTCACCGCTATCAAGGCTACTGTTCTCGAAATGGCAACGGGATCATTCCGGGACATGTTCACCATGGGCGAA GACCGTCATTTCCACCGCACTATGTTGGCATATGTCAACCAAATGTTCCAGCAAATTTCCGGCATCAACTTGATC ACCTACTATATTCCCACTCTTCTGGAGCAACAGGTCGGACTGGATGCCACGACTTCACGTCTTATCTCTGCATGT AATGGAACGGAATATTTCATCGCGTCCTGGATAGCCGTGTTCACAGTCGAAAAGTTTGGCCGTCGAACACTCATG CTCTTCGGTGCGGTGGGAATGTCGATTTCAATGGCGGTGCTTGCTATCGCCGACAGCATTTCCTCAAGCCACAAA CAGACCTCTATAGGTGTCAAGGCAGGTGTGGCACAGACAGTATTTCTGTTTGTGTTTAATACCTTTTTTGCCATC GGTTGGCTTGGGATGACTTGGTTGTATCCAGCCGAGATTGTCCCACTGAAGATTCGTGCCCCAGCTAATGCATTG TCTACTTCTTCGAACTGGATTTGGAACTTCATGGTTGTCATGATTACCCCTGTTGCTTTTGAAAGCATTGGTTAC AAGACCTATGTCATTTTCGCCGTGATCAATGCTGCCATCGTGCCCGTCGTCTATTTCTTCTTCCCCGAGACTACC ATGCGTTCATTGGAAGAGATGGACCGTATATTCCGCAAAACTACCAACGTCTTCAATGTGGTCTCGCTTGCTCGC ACTGAGCCCCATATGTATGGTTCAAATGGTGAACTCTTGCGTACTTTGGATGATGTCGAGGATGATGCTGTTCGT CGTGCCAGCTTCCTAAACAAGGAGAGTAAGGTTCACCACCAGAGCCACACTCAGCACGCAGAGCAATACAGCGAC GAACACACCAGCGAGGTGAAATGA |
| Gene | >Pro_DTO377G3_2|g1706.t1 ATGCAGACCAGGCGGTTCTTGGGCCTCAACGGCACCAAGCTTCAGATCGCCATCGGCTTCTTGGCTGGCATGGAC TTCCTGCTGTTTGGTTATGATCAAGGCGTGACTGGTGGTTTGCTGACACTGGACTCTTTCGTCAAATATTTCCCC GAAATCAACACTCTAGATTCATATACCGAGAACTGGAGCTCAGCAGCAAAGAGCAACCAGTCAACCCGACAAGGT ATCACGGTCGCAGCGTACAACCTGGGATGTTTCGCTGGCTCGATTCCTACAATCTGGATCGGTAACATTTTGGGT CGTCGGAAGGCTATCTTTGTCGGTTCTTTTATTATGTGTATCGGTGCCATCCTTCAGTGCACATCCTACGGACTT GCTCAGCTTGTTATCGGTCGATTGGTCACTGGGTTCGGTTAGTATGGCGAAACACATGGAGTAGCAATCCATTAA CATGAACTGCAGGCAACGGAATCAACACCTCTACGGTCCCGACTTGGCAGTCAGGTAAGCAAAATGAAGACAATC CCGCCTCACTGTATTGTTCCGATTCGCCTCGCCGCTATATCTTGATTATTGCGAGCGATGGATTGGCGAGAGTGG CAGTAAATAATGAAAATTATCTAACATCGAGTAGAATGCTGCAAATCCCACCGACGAGGTCAGATGGTCATGATC GAGGGTGCCATGATCACATGCGGTATAACCATCAGTTACTGGATCGATTTCGGATTGATGTTTGCAGACCCAAAC GAAGTCGCTTGGAGATTCCCGCTGGCGTTCCAAATCTTCTTCGCCGCGATTATTCTGGGTTTCGTCATGTTCCTC CCCGAGTCACCCCGTTGGCTTATTCTAAAGGGTCGCGAGGAAGAAGCAAAAGAGATCCTGGCATGCTTGATGGGT GACGAGGCTGATGAGTTGTTCATCGACACCGAATTCACCGCTATCAAGGCTACTGTTCTCGAAATGGCAACGGGA TCATTCCGGGACATGTTCACCATGGGCGAAGACCGTCATTTCCACCGCACTATGTTGGCATATGTCAACCAAATG TTCCAGCAAATTTCCGGCATCAACTTGATCACCTACTATATTCCCACTCTTCTGGAGCAACAGGTCGGACTGGAT GCCACGACTTCACGTCTTATCTCTGCATGTAATGGAACGGAATATTTCATCGCGTCCTGGATAGCCGTGTTCACA GTCGAAAAGTTTGGCCGTCGAACACTCATGCTCTTCGGTGCGGTGGGAATGTCGATTTCAATGGCGGTGCTTGCT ATCGCCGACAGCATTTCCTCAAGCCACAAACAGACCTCTATAGGTGTCAAGGCAGGTGTGGCACAGACAGTATTT CTGTTTGTGTTTAATACCTTTTTTGCCATCGGTTGGCTTGGGATGACTTGGTTGTATCCAGCCGAGATTGTCCCA CTGAAGATTCGTGCCCCAGCTAATGCATTGTCTACTTCTTCGAACTGGATTTGGAACTTCATGGTTGTCATGATT ACCCCTGTTGCTTTTGAAAGCATTGGTTACAAGACCTATGTCATTTTCGCCGTGATGTAAGTCCTTTTTGGTCCC CTATCACTATATTTTGTACTGACCAGCTTAGCAATGCTGCCATCGTGCCCGTCGTCTATTTCTTCTTCCCCGAGA CTACCATGCGTTCATTGGAAGAGATGGACCGTATATTCCGCAAAACTACCAACGTCTTCAATGTGGTCTCGCTTG CTCGCACTGAGCCCCATATGTATGGTTCAAATGGTGAACTCTTGCGTACTTTGGATGATGTCGAGGATGATGCTG TTCGTCGTGCCAGCTTCCTAAACAAGGAGAGTAAGGTTCACCACCAGAGCCACACTCAGCACGCAGAGCAATACA GCGACGAACACACCAGCGAGGTGAAATGA |